Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AGAP11 Gene 0 14.18 11.24 16.08 11.94 12.42 18.87 12.62 16.33 32.64 5.90 3.28 7.63 10.13 4.22 4.38 6.65 6.63 12.06 10.19 13.39 18.21 8.99 8.51 2 433214 Transcript 0 1.76 3.73 6.74 6.13 2.68 0.00 1.77 1.15 0.41 4.97 0.32 0.00 0.00 0.81 0.00 0.00 0.00 4.93 2.12 5.67 1.84 1.39 1.47 3 280961 Transcript 0 1.06 5.08 7.96 6.13 4.01 0.00 1.32 0.86 0.31 1.15 0.97 0.00 0.00 0.00 0.00 0.00 0.00 1.85 1.59 4.26 0.00 0.52 0.00 4 444431 Transcript 0 10.21 15.95 8.81 10.43 12.35 9.41 17.53 15.87 18.24 5.66 4.56 10.31 15.02 6.57 5.85 10.50 9.67 17.60 13.55 19.07 4.83 6.77 8.38 5 ER1a ExonRegion 0 0.62 0.00 0.62 0.71 0.78 0.04 0.02 0.02 1.36 0.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 2.04 0.00 0.00 6 E1_Da NovelBoundary 0 0.00 0.00 7.60 2.00 8.23 53.95 4.11 14.01 21.56 3.92 7.21 6.30 0.00 10.36 15.20 0.00 3.93 5.93 8.19 0.00 39.97 8.63 12.38 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 8 I1_AR1 ActiveIntronRegion 0 2.19 0.26 4.24 0.00 1.73 11.07 1.54 5.32 12.32 1.54 2.63 1.84 0.00 5.55 2.60 1.53 3.41 4.03 6.17 0.00 18.61 1.08 3.41 9 E2_Aa NovelBoundary 0 27.56 166.94 284.08 344.18 108.74 28.00 56.97 32.82 15.22 155.93 2.68 0.00 0.00 0.00 0.00 0.00 0.00 30.63 76.80 106.87 5.31 7.72 0.00 10 ER2a ExonRegion 0 27.09 57.10 80.50 85.61 49.08 14.10 33.85 9.13 7.07 50.44 2.01 5.51 1.99 0.00 1.05 0.00 0.00 25.05 24.68 77.15 15.67 6.44 1.57 11 E2_Da NovelBoundary 0 16.30 88.73 162.32 156.76 50.42 2.61 63.33 13.64 8.97 69.38 0.00 0.00 0.00 0.00 0.00 0.00 3.74 27.40 38.59 94.92 5.19 16.78 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2_Db NovelBoundary 0 0.00 19.73 95.03 91.73 0.00 2.90 6.67 13.02 20.17 24.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.20 9.60 9.65 0.00 0.00 3.41 14 E2b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2b ExonRegion 0 2.12 10.17 15.93 12.27 8.03 0.00 2.65 1.73 0.62 2.29 1.93 0.00 0.00 0.00 0.00 0.00 0.00 3.70 3.19 8.51 0.00 1.04 0.00 16 I2 Intron 0 8.44 0.22 3.94 3.72 3.17 6.13 0.72 5.00 19.05 0.74 0.00 0.38 0.00 0.00 0.00 0.00 1.07 0.00 0.69 0.00 11.88 5.39 5.38 17 I2_SR1 SilentIntronRegion 0 8.48 0.22 3.95 3.74 3.19 6.16 0.72 5.02 19.13 0.74 0.00 0.39 0.00 0.00 0.00 0.00 1.07 0.00 0.69 0.00 11.93 5.41 5.40 18 ER3a ExonRegion 0 3.53 7.46 13.48 12.27 5.35 0.00 3.53 2.30 0.82 9.94 0.64 0.00 0.00 1.62 0.00 0.00 0.00 9.85 4.25 11.35 3.67 2.78 2.94 19 ER3b ExonRegion 0 12.29 0.09 4.54 5.06 2.86 8.22 3.99 4.27 24.43 1.25 1.04 5.87 0.11 0.73 0.00 0.00 0.00 0.21 6.33 0.17 18.64 12.93 13.10 20 E3a_E4a KnownJunction 0 12.82 0.00 9.05 7.89 4.24 26.52 0.00 7.85 42.77 0.00 0.00 5.85 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 16.99 11.76 7.60 21 ER4a ExonRegion 0 5.79 0.00 3.85 3.25 1.96 6.05 0.82 6.65 17.98 1.41 0.62 0.30 1.17 0.43 0.00 0.00 0.00 0.00 0.92 0.00 10.87 6.58 5.91 22 E4_Ab KnownBoundary 0 3.78 0.00 19.90 19.21 0.00 8.69 4.50 53.89 55.87 79.40 103.61 7.65 8.28 4.59 0.00 16.24 87.98 51.82 18.54 56.25 43.06 17.51 31.16 23 ER4b ExonRegion 0 0.91 0.00 3.91 0.17 0.76 0.00 0.48 4.23 5.47 0.58 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 3.79 0.00 0.00 5.49 5.83 24 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER5a ExonRegion 0 7.93 0.00 1.26 0.54 3.32 6.37 0.90 2.04 10.65 0.30 0.00 0.00 1.03 0.00 0.00 0.00 0.00 0.74 1.77 0.00 3.53 0.09 1.20 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER6a ExonRegion 0 15.87 0.00 10.71 2.23 2.31 0.14 0.25 1.30 26.52 2.22 0.63 0.00 0.59 0.24 1.45 0.56 0.00 10.69 4.14 1.36 6.80 3.20 3.19 28 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER7a ExonRegion 0 13.31 4.95 10.56 6.49 8.63 16.54 17.50 6.99 48.20 3.16 3.10 5.69 15.05 3.35 3.00 1.43 2.35 11.85 5.64 4.37 11.28 6.03 8.97 30 E7_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER7b ExonRegion 0 8.52 24.77 17.06 21.25 17.61 15.08 31.06 29.75 37.87 11.09 5.56 15.51 19.28 9.14 5.21 13.63 13.68 35.09 29.50 28.61 5.83 8.21 12.56 33 E7_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER7c ExonRegion 0 12.85 6.22 15.86 19.34 12.24 29.90 14.17 19.31 55.06 6.59 8.35 18.22 5.10 6.21 5.55 8.53 10.59 11.22 9.58 13.34 20.41 16.74 11.16 35 E7_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E7b_E7c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER7d ExonRegion 0 22.12 23.07 9.37 10.03 18.97 13.14 21.51 17.39 15.63 5.89 8.12 15.43 25.76 10.58 12.34 17.88 15.33 17.70 11.16 28.62 8.67 12.11 12.59 38 E7_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER7e ExonRegion 0 32.04 15.62 29.80 29.90 19.35 31.89 16.56 42.88 78.43 8.32 2.16 21.30 25.14 4.74 16.91 8.59 10.56 8.54 5.89 25.40 23.09 24.75 20.67 40 E7c_E8a KnownJunction 0 50.31 0.00 7.27 7.66 20.88 28.73 4.50 9.86 48.00 0.00 2.26 0.00 0.00 0.00 4.45 0.00 0.00 0.00 13.55 0.00 23.97 19.29 18.78 41 ER8a ExonRegion 0 23.63 1.86 14.60 14.50 13.97 30.26 5.26 23.43 66.28 1.05 0.00 0.00 0.00 0.00 3.47 0.00 0.00 2.05 5.13 0.00 24.79 20.89 10.85 42 E8a_E9a KnownJunction 0 17.63 3.35 24.66 14.42 19.86 34.70 13.47 28.59 65.31 1.45 0.00 0.00 0.00 0.00 0.00 0.00 3.65 4.23 4.80 0.00 20.20 18.92 12.38 43 ER9a ExonRegion 0 13.72 2.70 20.71 20.52 17.86 34.98 7.38 29.05 73.28 4.52 0.00 9.49 0.00 0.00 2.01 0.00 5.97 3.94 4.47 1.27 20.00 22.04 6.61 44 E9a_E10a KnownJunction 0 12.74 0.00 11.38 14.65 18.42 23.74 2.08 21.69 61.89 4.24 0.00 6.30 0.00 0.00 0.00 0.00 9.54 3.15 0.00 3.26 22.86 17.51 7.68 45 ER10a ExonRegion 0 21.09 3.18 25.47 10.21 11.72 40.98 6.88 18.75 71.17 5.49 0.31 2.79 0.31 0.13 0.33 0.48 2.00 5.15 8.38 0.24 44.28 12.41 9.28 46 E10_Da KnownBoundary 0 461.64 345.79 614.59 267.86 528.27 791.19 298.10 489.60 416.40 196.50 152.25 56.72 81.98 136.97 106.93 344.52 170.55 372.75 353.89 345.73 201.21 144.08 199.58 47 ER10b ExonRegion 0 8.45 0.39 19.54 7.52 6.36 22.43 0.74 12.96 30.57 2.75 0.49 0.30 0.33 0.16 0.17 0.00 0.93 2.97 3.85 0.09 29.21 5.56 3.87 48 ER10c ExonRegion 0 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.47 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00