Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FAM35A	Gene	0	76.21	99.70	81.20	58.78	66.14	106.87	69.61	77.31	64.85	48.49	89.53	133.47	122.58	87.77	59.29	73.90	97.21	45.52	42.01	76.91	20.91	80.75	43.92
2	298784	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	298786	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	358313	Transcript	0	0.71	8.13	1.23	5.00	5.35	15.89	3.09	4.03	3.71	5.73	13.53	10.10	18.76	6.50	0.97	3.96	11.00	4.31	3.19	9.93	5.14	4.17	0.00
5	342900	Transcript	0	12.70	2.44	0.00	4.09	2.68	5.87	4.24	2.42	4.69	0.00	2.71	0.00	2.81	0.97	4.06	1.78	1.32	0.00	0.00	0.00	0.00	2.92	0.00
6	ER1a	ExonRegion	0	9.38	21.41	0.95	2.44	8.28	53.53	21.56	0.65	2.26	3.57	13.13	0.65	0.44	34.84	12.75	57.37	60.41	7.81	2.88	13.85	12.56	23.43	42.28
7	E1a_E2a	KnownJunction	0	28.30	41.51	4.29	4.13	26.99	65.87	48.18	1.77	7.29	7.52	31.06	5.85	6.01	66.16	18.54	110.40	120.62	11.44	0.00	32.28	20.57	52.97	104.23
8	Ix	Intron	0	3.38	3.45	3.71	4.13	4.02	2.31	5.32	2.25	2.59	1.90	3.65	7.35	9.70	5.20	10.14	8.49	8.95	14.77	3.86	13.09	5.76	2.83	4.69
9	Ix_SR2	SilentIntronRegion	0	3.74	3.81	4.11	4.57	4.44	2.55	5.75	2.48	2.68	1.94	3.73	7.94	10.52	5.71	11.05	9.23	9.43	16.03	4.10	14.40	6.18	3.13	5.19
10	ER2a	ExonRegion	0	8.81	30.87	2.69	11.90	16.72	43.00	22.98	6.45	9.51	9.09	29.37	20.87	34.09	44.03	13.16	67.67	77.04	8.97	15.81	29.29	14.40	31.14	40.22
11	E2_Da	NovelBoundary	0	3.41	14.54	15.20	22.04	4.33	2.61	2.12	8.71	11.95	3.73	2.68	12.60	33.11	0.00	0.00	0.00	0.00	19.48	9.51	8.82	0.00	5.39	4.35
12	E2a_E3b	KnownJunction	0	2.74	19.14	2.90	12.62	22.58	52.58	5.87	10.68	13.05	4.30	21.74	25.21	33.76	18.60	4.45	8.72	21.69	12.77	13.08	28.83	0.00	10.16	0.00
13	I2	Intron	1	19.25	17.04	18.78	14.24	22.21	9.28	21.19	6.24	7.28	5.57	7.33	23.78	39.41	5.97	23.84	20.36	16.75	16.45	15.12	26.22	5.51	5.97	16.56
14	I2_SR1	SilentIntronRegion	0	7.00	8.26	5.94	5.72	9.14	6.06	14.42	3.49	2.49	2.04	3.77	15.49	26.55	6.29	12.11	17.40	15.39	12.40	13.81	13.96	3.70	3.61	15.60
15	I2_SR2	SilentIntronRegion	1	12.24	16.43	10.37	10.86	13.02	6.48	14.66	5.35	7.31	3.64	7.57	30.09	29.70	5.17	17.26	9.91	14.71	8.78	5.85	19.22	3.37	6.11	11.30
16	I2_AR2	ActiveIntronRegion	1	29.18	34.08	23.71	17.20	24.16	8.42	21.87	6.15	7.84	9.09	14.67	45.46	53.01	6.55	32.49	20.58	12.45	7.61	17.95	42.78	5.41	11.74	10.81
17	I2_SR3	SilentIntronRegion	1	11.16	17.27	13.76	11.65	16.22	10.81	13.14	3.31	4.60	3.73	8.86	23.13	35.49	6.12	24.30	17.09	12.03	19.72	11.81	28.79	3.43	6.15	12.54
18	I2_AR3	ActiveIntronRegion	1	45.77	32.21	34.23	23.84	40.79	15.76	34.49	15.35	14.56	11.83	12.54	25.81	65.46	8.00	42.83	24.02	29.70	20.75	18.30	56.88	4.96	7.50	25.68
19	I2_SR4	SilentIntronRegion	1	22.61	17.20	25.51	17.81	28.87	10.23	25.28	6.17	8.21	6.76	7.18	24.05	43.56	5.59	27.32	25.93	15.94	20.44	19.39	26.56	7.82	6.47	17.86
20	I2	Intron	0	8.91	12.36	9.14	8.54	10.24	5.37	12.57	7.39	5.99	3.70	4.46	15.48	28.45	4.50	13.38	13.20	10.18	13.07	9.93	23.19	4.84	3.75	10.94
21	I2_SR1	SilentIntronRegion	1	10.77	9.04	10.38	10.59	11.96	7.15	12.72	5.56	3.56	3.35	3.98	14.92	26.92	3.11	17.35	18.74	12.70	12.74	14.08	21.50	5.14	3.98	14.00
22	I2_SR2	SilentIntronRegion	0	8.45	12.72	8.25	7.92	9.73	5.26	13.57	6.85	6.50	3.42	4.63	17.70	32.36	4.89	13.36	12.73	9.99	13.56	9.50	25.42	5.28	3.89	11.08
23	I2_AR2	ActiveIntronRegion	0	11.70	39.04	14.36	12.58	12.41	2.46	13.74	18.84	9.71	3.84	8.74	13.83	19.28	3.10	12.67	8.50	9.74	9.60	9.54	30.56	2.60	4.50	9.72
24	ER3a	ExonRegion	0	0.71	8.13	1.23	5.00	5.35	15.89	3.09	4.03	3.71	5.73	13.53	10.10	18.76	6.50	0.97	3.96	11.00	4.31	3.19	9.93	5.14	4.17	0.00
25	ER3b	ExonRegion	0	32.17	80.38	39.43	32.61	43.61	70.27	47.04	54.93	51.45	40.74	98.50	201.33	204.06	89.79	39.23	67.92	112.31	34.27	37.02	88.48	16.24	81.24	40.73
26	E3_Ac	KnownBoundary	1	60.23	72.36	21.14	34.39	40.75	108.40	30.83	42.27	19.50	14.64	61.33	43.66	35.55	0.00	5.32	0.00	61.43	18.03	9.60	29.21	11.86	2.69	4.18
27	ER3c	ExonRegion	0	42.69	79.16	54.41	41.87	50.51	76.04	58.53	56.75	45.81	36.48	56.69	103.63	115.65	42.37	23.14	46.05	67.58	26.48	28.01	48.38	10.62	55.03	27.41
28	E3_Da	NovelBoundary	0	9.48	6.25	6.80	9.56	4.33	5.17	13.51	4.39	6.05	1.56	2.68	12.60	12.82	2.88	0.00	8.03	0.00	11.98	8.47	9.52	6.12	9.12	21.43
29	E3a_E4a	KnownJunction	0	71.12	183.59	113.57	60.30	205.09	159.74	156.03	88.97	47.13	53.62	108.13	270.39	248.85	155.98	88.63	125.52	129.78	53.81	66.92	104.63	15.81	129.57	54.38
30	ER4a	ExonRegion	0	65.96	91.94	98.63	52.76	94.02	92.03	75.55	94.23	62.62	51.12	106.51	200.20	191.12	134.32	72.61	107.57	122.56	66.59	91.93	100.31	25.10	107.01	80.08
31	E4a_E5a	KnownJunction	0	66.38	95.31	77.44	37.42	71.14	44.63	43.59	32.57	58.33	43.73	127.30	118.99	157.62	89.06	54.39	52.12	56.10	32.79	26.82	65.39	16.43	66.56	32.95
32	I4_AR2	ActiveIntronRegion	1	1.96	3.30	1.78	5.49	0.00	1.88	2.32	2.29	4.11	0.00	0.00	16.45	29.66	0.00	0.00	1.41	0.00	1.71	3.58	5.27	0.00	6.25	8.37
33	E5_Aa	NovelBoundary	0	0.00	12.30	1.27	10.69	7.98	15.62	23.63	4.44	6.74	1.07	0.00	24.61	45.13	4.83	8.90	0.00	3.55	2.11	0.00	17.77	10.69	12.25	4.35
34	ER5a	ExonRegion	0	113.69	206.00	96.62	79.62	108.75	151.06	99.41	75.69	84.48	60.21	124.80	187.43	154.51	170.67	82.28	108.67	138.15	79.57	78.34	119.21	35.68	104.49	73.25
35	E5a_E6a	KnownJunction	0	154.47	204.44	115.67	98.12	155.18	245.31	150.20	83.42	81.65	54.64	125.87	185.16	180.67	186.47	112.00	111.59	150.72	79.55	54.78	133.97	29.22	92.83	69.74
36	ER6a	ExonRegion	0	75.25	104.71	88.30	78.54	55.42	109.86	80.94	82.25	67.85	52.98	100.84	102.27	93.45	108.43	60.39	78.53	139.25	78.93	43.18	105.91	28.24	97.37	47.07
37	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E6a_E8a	KnownJunction	0	37.34	84.00	36.84	28.10	45.59	50.54	18.46	14.21	16.26	17.11	55.12	19.51	20.45	55.09	13.35	30.85	56.38	24.66	21.46	30.10	8.65	41.88	25.27
39	ER7a	ExonRegion	0	81.91	106.49	62.35	37.75	47.90	77.12	63.09	64.11	63.35	40.39	86.78	61.70	46.18	54.18	43.98	51.82	105.13	41.35	33.92	48.75	19.66	74.00	29.00
40	E7a_E8a	KnownJunction	0	148.77	82.09	56.12	37.69	43.29	134.58	73.09	62.06	61.75	44.97	83.55	119.44	83.27	94.41	109.52	75.28	107.06	50.45	38.87	27.04	17.73	95.10	59.41
41	ER8a	ExonRegion	0	101.27	115.14	101.30	66.17	72.20	115.15	80.26	84.98	77.41	69.83	125.06	99.92	109.90	109.65	84.52	97.85	120.91	62.39	51.33	82.11	28.04	99.58	46.33
42	E8a_E9a	KnownJunction	0	120.32	73.61	115.25	69.75	97.54	148.83	104.58	105.68	80.18	62.16	95.66	74.27	62.33	125.61	88.02	105.44	93.13	66.12	58.07	71.52	26.26	67.30	52.16
43	ER9a	ExonRegion	0	156.39	119.21	130.62	79.28	126.91	202.40	134.15	104.90	93.51	70.24	142.18	155.52	131.20	157.65	117.80	132.95	123.27	111.63	58.65	95.41	46.66	86.23	83.67
44	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	I9_AR1	ActiveIntronRegion	0	6.68	12.98	21.56	11.85	10.23	11.16	9.72	19.64	14.31	6.39	17.70	18.32	15.01	10.56	8.74	12.29	15.23	7.28	7.77	18.17	2.68	13.37	5.11
46	I9_AR2	ActiveIntronRegion	0	8.12	15.58	7.00	5.45	11.29	14.05	5.08	13.81	12.70	6.55	5.93	2.73	5.92	11.03	6.61	14.82	6.33	14.45	6.11	7.33	4.23	4.79	7.86
47	E10_Aa	NovelBoundary	0	56.16	56.96	52.95	18.18	20.80	39.86	40.19	38.12	23.96	25.49	15.27	17.71	19.48	48.56	39.19	8.72	8.79	31.38	17.60	63.15	11.06	29.82	24.58
48	ER10a	ExonRegion	0	124.96	111.04	135.89	95.25	89.49	153.91	88.03	115.62	85.51	58.65	80.15	97.44	60.17	83.47	88.41	76.73	72.74	46.84	42.87	73.07	23.11	86.07	43.80
49	ER10b	ExonRegion	0	12.70	2.44	0.00	4.09	2.68	5.87	4.24	2.42	4.69	0.00	2.71	0.00	2.81	0.97	4.06	1.78	1.32	0.00	0.00	0.00	0.00	2.92	0.00
50	IG17_AR4	ActiveIntergenicRegion	0	11.32	10.74	5.22	8.92	14.02	37.51	9.56	12.40	4.65	9.62	0.00	0.00	0.00	3.53	3.91	2.97	0.00	7.95	17.31	15.54	6.75	1.72	2.75