Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZMIZ1 Gene 0 89.91 398.38 257.64 188.48 221.60 490.17 259.68 479.77 637.06 268.34 52.69 32.89 29.94 144.10 5.24 46.57 33.53 541.78 264.62 392.01 219.18 266.94 266.85 2 372347 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 394592 Transcript 0 36.23 116.95 180.83 129.09 56.88 190.97 115.35 358.82 546.17 293.76 31.38 11.10 6.17 17.54 4.70 28.71 24.59 380.87 187.86 252.28 187.62 205.25 118.83 4 334512 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 472035 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 360331 Transcript 0 0.94 7.68 8.17 4.24 17.24 5.50 6.33 7.68 4.53 2.29 0.00 0.96 0.00 0.18 0.00 0.00 0.00 0.21 0.00 1.18 0.00 0.93 3.26 7 478357 Transcript 0 1.86 11.17 11.39 5.61 7.10 28.58 13.63 39.33 72.01 29.59 6.81 3.20 1.67 18.76 0.36 7.84 7.21 96.50 49.83 58.12 53.27 46.43 55.64 8 446377 Transcript 0 10.59 26.05 48.64 26.84 37.78 121.58 80.91 87.61 152.63 89.37 26.16 18.01 6.82 41.62 0.00 28.03 9.54 80.42 64.28 71.84 181.81 42.07 90.66 9 ER1a ExonRegion 0 0.46 5.63 1.83 0.65 0.00 7.88 3.39 10.66 13.91 5.39 3.73 0.18 1.67 1.54 0.96 4.63 6.87 46.43 31.33 26.25 64.00 12.34 63.10 10 E1a_E2a KnownJunction 0 0.00 5.92 4.08 5.16 0.00 30.21 15.90 28.59 37.33 15.58 0.00 6.00 0.00 2.47 0.00 0.00 4.77 133.69 43.20 48.58 98.60 48.68 144.69 11 ER2a ExonRegion 0 6.29 23.44 15.90 17.38 15.98 88.72 26.60 58.03 89.80 42.90 7.13 1.34 4.43 6.57 1.71 21.94 25.00 183.52 78.42 142.59 184.95 84.76 154.68 12 E2a_E3a KnownJunction 0 6.59 35.06 39.53 29.13 40.83 94.89 21.68 103.47 146.01 73.92 12.21 0.00 14.93 7.00 4.45 38.79 31.32 280.14 114.92 263.79 198.74 135.69 223.91 13 ER3a ExonRegion 0 10.87 25.82 38.06 29.16 18.37 45.00 27.79 94.33 150.01 86.08 16.15 11.32 12.36 9.64 5.83 52.29 41.02 295.68 175.26 221.32 245.39 233.46 319.36 14 E3a_E4a KnownJunction 0 23.93 38.22 44.56 36.63 32.26 75.24 40.19 124.54 241.72 110.48 16.32 13.50 13.31 2.47 0.00 50.24 66.85 409.77 248.95 274.97 305.12 369.48 430.66 15 E3a_E5a NovelJunction 0 0.00 0.00 1.09 3.40 0.00 5.22 0.00 4.68 8.94 9.75 0.00 0.00 0.00 0.00 0.00 7.35 0.00 19.69 18.45 8.37 3.15 5.45 3.59 16 ER4a ExonRegion 0 15.23 33.77 43.19 38.72 14.24 51.96 42.71 117.96 219.26 106.28 15.49 9.41 21.42 6.52 1.79 37.61 48.01 234.73 181.09 237.40 328.49 271.68 296.31 17 E4a_E5a KnownJunction 0 17.41 36.24 44.82 43.25 40.32 109.37 40.01 156.12 251.15 130.09 28.06 17.11 13.64 7.00 4.45 27.00 34.88 232.84 164.80 281.75 359.11 241.02 269.58 18 ER5a ExonRegion 0 22.49 57.63 56.29 46.38 32.99 143.12 70.04 185.47 308.74 144.25 22.82 29.31 24.78 10.85 5.30 56.80 47.09 293.71 302.49 312.34 358.40 393.44 437.94 19 E5a_E6a KnownJunction 0 17.04 76.43 67.80 68.72 86.93 255.14 96.05 215.23 376.07 182.10 18.69 36.31 24.84 11.77 4.45 107.32 56.66 590.46 572.72 395.97 419.41 656.79 879.15 20 I5_AR2 ActiveIntronRegion 0 21.17 4.07 1.23 5.45 18.73 1.83 5.30 4.32 10.29 11.28 0.00 0.00 0.00 0.00 2.90 2.97 3.30 34.18 18.05 10.64 4.41 2.08 16.15 21 ER6a ExonRegion 0 9.82 54.16 42.33 36.38 32.91 126.61 65.30 150.89 303.47 139.53 21.89 21.34 15.26 17.04 6.06 44.53 52.24 411.04 272.99 249.10 423.25 382.64 484.19 22 E6a_E7a KnownJunction 0 13.56 64.92 46.80 47.51 35.57 161.84 86.51 139.20 271.47 157.44 26.38 12.15 6.33 11.77 9.27 67.33 72.28 492.09 354.74 239.88 443.31 423.06 426.30 23 ER7a ExonRegion 0 12.80 66.61 40.69 45.44 29.36 147.24 77.51 159.60 322.55 147.11 24.34 13.19 27.26 14.43 5.75 69.56 53.97 500.83 334.64 268.37 420.70 448.13 465.21 24 E7a_E9b KnownJunction 0 7.19 70.84 45.00 45.68 37.95 174.16 83.07 180.64 345.19 153.49 28.27 6.30 13.64 24.31 0.00 55.37 55.91 524.76 341.66 307.83 454.19 435.06 464.12 25 E8_Aa NovelBoundary 0 0.00 5.85 21.88 5.46 3.31 82.11 20.80 66.83 106.89 45.42 15.53 0.00 13.31 47.74 4.45 4.10 12.90 88.71 25.69 62.96 0.00 0.00 0.00 26 ER8a ExonRegion 0 0.00 10.81 20.11 2.69 8.75 48.62 15.40 75.14 112.59 43.43 15.44 6.68 3.62 59.79 0.00 2.80 2.40 164.90 38.32 84.38 4.47 0.80 4.15 27 E8a_E9b KnownJunction 0 0.00 32.56 56.89 19.11 22.41 89.04 51.36 205.78 325.34 125.69 28.22 19.96 6.82 160.75 0.00 8.46 0.00 431.74 117.46 215.02 2.59 3.12 0.00 28 ER9a ExonRegion 0 3.53 30.50 29.00 14.08 18.73 82.52 31.78 110.62 201.74 83.34 19.97 8.66 4.69 54.68 0.97 22.79 19.81 277.16 128.48 158.16 149.12 134.04 150.75 29 ER9b ExonRegion 0 17.04 92.67 124.15 86.20 65.05 299.07 123.06 434.66 821.18 347.94 83.20 48.41 44.62 211.12 7.01 89.66 58.04 1207.38 438.65 560.15 446.37 406.98 523.68 30 E9a_E10a KnownJunction 0 19.26 101.23 200.79 112.31 74.53 363.37 174.22 695.59 1237.02 459.04 109.08 30.91 53.08 253.40 0.00 105.36 48.81 1616.56 486.32 711.40 485.01 339.54 422.12 31 ER10a ExonRegion 0 26.52 125.12 156.45 90.71 80.90 427.06 174.49 606.53 1102.16 416.29 128.14 38.46 74.07 310.21 6.49 114.60 68.83 1455.48 639.23 911.95 520.92 432.51 492.06 32 E10_Da KnownBoundary 0 30.67 161.48 152.21 87.73 96.94 490.68 200.32 642.23 1131.67 416.74 144.62 54.92 101.94 363.18 18.67 101.85 85.83 1439.30 784.96 1052.59 512.32 446.15 553.67 33 E10a_E25b KnownJunction 0 36.23 116.95 180.83 129.09 56.88 190.97 115.35 358.82 546.17 293.76 31.38 11.10 6.17 17.54 4.70 28.71 24.59 380.87 187.86 252.28 187.62 205.25 118.83 34 ER10b ExonRegion 0 18.92 100.98 132.11 93.23 49.55 329.50 123.78 477.52 922.78 359.83 98.46 41.58 59.58 293.14 5.59 68.69 59.78 1148.64 415.55 704.10 469.23 322.92 418.89 35 E10b_E11a KnownJunction 0 48.90 128.92 186.21 106.51 43.72 308.29 170.11 550.43 1030.57 424.42 91.76 60.92 54.70 332.57 0.00 91.51 56.10 1290.82 411.96 765.02 468.64 417.80 536.85 36 ER11a ExonRegion 0 19.60 118.60 145.59 97.18 56.55 340.87 160.00 480.32 856.39 327.05 84.26 44.97 50.04 265.63 6.81 77.53 59.10 1171.79 430.93 655.38 397.73 295.20 388.45 37 E11_Da KnownBoundary 0 21.11 108.20 133.41 98.92 24.70 289.09 118.36 409.47 698.05 285.27 66.65 37.21 27.27 176.35 4.45 27.51 20.20 1020.29 349.66 483.73 354.11 175.19 294.67 38 ER11b ExonRegion 0 11.56 90.53 110.08 67.11 43.84 286.78 126.21 327.11 586.53 257.25 63.17 34.54 35.05 269.64 3.76 48.08 45.52 852.67 301.80 488.57 272.07 222.36 282.95 39 E11b_E12a KnownJunction 0 16.23 108.53 132.14 79.84 56.11 281.54 135.14 377.51 704.10 312.14 53.22 54.92 20.29 262.76 0.00 43.24 25.62 1245.22 338.46 478.80 273.67 279.04 370.13 40 ER12a ExonRegion 0 17.06 82.86 67.44 27.98 29.58 225.70 110.91 181.95 350.24 167.45 44.88 21.86 20.79 167.46 4.58 23.36 25.69 443.96 210.54 322.55 203.26 183.38 149.52 41 E12a_E13a KnownJunction 0 10.08 47.49 59.43 32.53 17.15 319.08 180.49 182.08 368.72 134.77 50.22 35.11 19.97 148.27 0.00 30.08 13.09 249.22 124.05 153.66 117.50 129.45 112.94 42 E12a_E13b KnownJunction 0 22.37 94.19 62.74 40.42 71.22 503.63 180.05 218.23 349.74 177.21 31.06 31.36 0.00 107.66 8.90 20.42 4.11 432.19 180.71 400.38 158.03 168.88 177.13 43 E13_Ab NovelBoundary 0 6.00 18.42 45.36 23.37 27.25 200.23 121.76 101.66 256.86 73.09 15.42 6.75 11.69 80.82 0.00 11.71 4.21 121.87 25.04 76.96 51.09 39.56 39.27 44 ER13a ExonRegion 0 7.46 41.31 51.92 27.33 30.98 288.10 146.96 153.20 338.94 121.33 45.88 25.98 19.75 135.31 0.46 27.06 11.29 208.89 86.51 149.16 102.18 107.58 93.35 45 ER13b ExonRegion 0 10.42 79.40 63.06 40.18 35.66 243.23 94.91 250.36 482.35 225.37 57.58 21.95 24.90 182.91 3.62 32.44 28.32 547.95 264.77 321.06 223.24 191.77 197.50 46 E13_Da KnownBoundary 0 0.00 0.00 1.71 0.00 7.81 2.44 15.10 2.38 8.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.16 4.42 0.00 0.00 3.12 16.22 47 E13a_E13c KnownJunction 0 54.90 164.97 78.26 62.76 119.44 570.69 322.74 426.96 725.74 318.93 59.07 12.90 27.60 164.22 0.00 36.14 31.04 380.92 275.11 360.75 263.91 160.80 151.26 48 ER13c ExonRegion 0 1.64 0.79 3.23 0.43 0.61 0.00 6.05 4.64 8.53 2.56 0.00 0.00 0.00 1.03 0.77 0.00 2.55 10.12 9.89 0.69 4.11 4.07 9.59 49 E13_Db KnownBoundary 0 0.00 0.00 0.00 3.33 0.00 0.00 0.00 6.45 14.06 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.15 8.85 5.43 2.41 3.12 7.26 50 ER13d ExonRegion 0 1.70 1.90 3.84 2.75 2.10 2.90 6.73 5.87 10.68 3.71 0.46 0.94 0.32 1.39 0.12 0.75 1.82 11.00 13.28 11.10 9.93 4.87 13.26 51 E13_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 4.07 26.63 4.50 11.67 4.80 7.87 0.00 0.00 6.82 0.00 0.00 0.00 0.00 9.49 8.19 8.95 14.27 0.00 16.48 52 ER13e ExonRegion 0 11.86 90.84 68.99 59.73 35.84 361.83 145.23 335.87 554.00 273.12 56.03 41.80 45.69 174.53 3.12 52.16 18.15 557.61 387.04 440.11 265.24 265.76 330.94 53 E13_Dc KnownBoundary 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 1.89 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 2.68 0.00 0.00 4.27 54 E13c_E14a KnownJunction 0 19.26 136.09 106.92 73.82 41.85 231.00 88.06 496.01 770.25 366.42 79.02 75.77 103.56 253.11 11.13 84.59 44.97 657.70 525.38 560.75 378.57 333.91 381.74 55 ER13f ExonRegion 0 0.35 1.10 1.32 0.00 0.48 0.33 2.39 1.49 3.63 1.72 0.00 0.00 0.00 0.21 0.00 0.00 0.00 1.33 7.74 5.11 0.77 0.38 2.92 56 ER14a ExonRegion 0 23.25 132.05 116.39 105.59 51.59 230.33 127.13 528.02 878.51 397.74 98.55 30.97 46.12 223.17 13.17 62.83 61.45 687.69 520.64 694.76 384.07 399.66 429.05 57 E14a_E15a KnownJunction 0 18.60 194.57 169.45 181.53 108.15 421.52 166.76 764.96 1243.01 549.38 84.50 41.71 18.83 233.15 10.63 54.86 52.45 1280.29 465.43 888.26 408.04 378.12 535.65 58 ER15a ExonRegion 0 25.11 129.06 134.30 111.58 109.93 498.73 198.19 523.54 860.20 379.47 96.62 56.38 70.43 250.35 8.37 76.61 72.43 991.34 562.86 787.28 428.87 432.36 480.72 59 E15a_E16a KnownJunction 0 10.15 110.31 142.43 114.37 60.53 376.89 135.62 424.71 763.42 299.75 83.86 18.46 27.43 185.59 13.35 31.87 34.41 876.78 254.22 663.59 322.17 239.30 251.82 60 ER16a ExonRegion 0 9.99 99.09 132.78 91.86 47.71 296.17 133.09 411.48 704.86 305.76 64.48 46.25 42.24 202.83 4.13 34.85 43.86 718.70 265.98 680.29 314.15 220.34 252.03 61 E16a_E17a KnownJunction 0 37.04 196.48 138.82 122.76 95.76 332.76 200.50 487.30 892.32 345.74 79.70 68.72 55.84 202.37 10.38 53.32 70.97 916.95 282.08 852.91 308.58 289.70 309.87 62 ER17a ExonRegion 0 20.43 121.30 156.71 95.78 62.53 359.31 156.99 422.63 708.15 283.30 71.01 45.98 37.43 191.11 6.92 53.63 42.90 835.06 267.19 660.08 317.31 217.92 283.50 63 E17a_E18a KnownJunction 0 56.16 159.71 170.10 120.66 63.24 454.68 178.68 526.98 775.02 296.45 71.44 38.26 12.99 131.62 8.90 72.89 36.47 1079.32 339.68 654.70 327.85 245.18 323.61 64 ER18a ExonRegion 0 35.06 232.96 175.60 116.57 115.84 450.80 224.65 437.15 706.43 288.78 89.37 38.64 24.03 228.68 9.61 73.32 38.30 827.62 277.16 644.16 329.04 233.92 330.46 65 E18a_E19a KnownJunction 1 49.34 330.27 207.30 178.27 233.11 667.57 363.33 529.69 898.57 370.37 119.24 12.60 27.11 302.84 18.54 83.14 60.50 1106.14 339.68 821.46 400.81 284.92 451.06 66 ER19a ExonRegion 0 38.96 288.84 216.01 165.44 150.37 554.98 271.42 552.60 947.52 414.41 108.04 43.11 27.12 267.68 8.72 68.82 61.69 1177.90 375.00 754.88 382.38 310.61 390.14 67 E19a_E20a KnownJunction 1 42.45 423.87 275.12 209.93 266.47 969.61 496.34 649.71 1215.73 564.24 141.30 36.61 6.66 309.91 6.06 77.33 66.85 1238.21 404.53 971.61 427.62 347.44 463.78 68 ER20a ExonRegion 0 27.48 253.51 253.90 191.73 207.13 764.42 346.18 679.49 1214.43 531.54 118.93 34.25 69.52 291.65 6.74 79.24 59.37 1278.26 480.29 873.34 435.30 399.36 449.18 69 E20a_E21a KnownJunction 0 26.75 288.30 315.60 245.06 279.46 857.57 422.81 762.54 1346.11 554.70 102.55 48.92 78.89 304.02 13.47 63.74 44.69 1496.38 538.46 986.63 389.14 455.82 556.74 70 ER21a ExonRegion 0 38.86 310.40 310.20 260.98 194.48 577.35 355.09 836.25 1351.61 571.56 136.70 67.20 46.42 324.42 5.72 118.37 54.73 1820.68 762.64 965.98 467.19 568.05 671.30 71 E21a_E22a KnownJunction 1 65.12 431.04 345.76 282.15 231.66 605.67 365.40 965.28 1431.87 645.28 149.83 12.60 55.68 306.02 0.00 171.75 53.11 1856.95 1070.90 1216.79 584.60 711.78 730.03 72 ER22a ExonRegion 0 20.90 222.36 228.30 172.62 124.88 497.58 199.70 670.86 1131.50 501.72 108.19 44.53 51.71 262.12 9.05 73.68 41.22 1281.56 570.13 785.07 445.74 414.94 454.59 73 E22_Ab KnownBoundary 0 20.30 271.46 214.45 153.63 168.68 635.43 217.68 727.67 1236.47 506.67 102.24 32.26 45.13 259.52 8.90 63.32 34.32 1118.58 432.86 706.03 467.84 350.75 329.33 74 ER22b ExonRegion 0 31.95 240.40 160.55 126.77 103.78 520.10 211.04 525.07 854.46 380.65 75.57 51.61 45.00 232.04 5.07 72.25 41.92 993.71 497.55 591.69 400.81 373.45 432.18 75 E22a_E23a KnownJunction 0 76.16 274.29 148.13 93.99 112.82 565.53 249.30 491.04 914.72 398.34 76.12 24.91 32.30 187.00 5.56 69.30 95.09 853.61 579.22 789.76 525.97 511.54 454.47 76 ER23a ExonRegion 0 33.48 156.82 114.65 62.46 79.98 363.97 147.70 358.82 610.32 283.27 66.32 26.08 30.08 192.45 8.25 50.79 44.02 532.14 311.54 430.82 330.52 256.53 240.68 77 E23a_E24a KnownJunction 0 18.74 174.71 132.55 53.34 108.57 406.98 152.80 391.44 595.54 235.82 49.01 19.96 12.99 189.36 0.00 43.41 44.79 646.96 343.45 431.19 167.17 204.95 166.88 78 E23a_E25a KnownJunction 0 10.59 26.05 48.64 26.84 37.78 121.58 80.91 87.61 152.63 89.37 26.16 18.01 6.82 41.62 0.00 28.03 9.54 80.42 64.28 71.84 181.81 42.07 90.66 79 I23_AR1 ActiveIntronRegion 0 6.46 18.73 17.47 17.17 26.12 55.28 38.08 46.70 97.68 32.39 5.61 3.53 3.15 19.87 1.79 4.53 3.15 109.53 48.19 77.45 35.94 34.58 71.04 80 E24_Aa NovelBoundary 0 28.82 26.44 32.38 28.43 17.15 47.59 24.55 54.42 119.85 34.33 6.90 0.00 6.82 24.13 0.00 4.36 13.09 132.36 105.32 63.28 51.46 31.23 39.78 81 ER24a ExonRegion 0 12.21 111.76 98.98 52.73 68.89 302.79 107.04 294.61 451.24 192.59 42.61 17.98 25.62 168.96 4.38 31.16 23.16 643.97 259.98 354.89 166.36 164.22 211.21 82 E24a_E25a KnownJunction 0 19.04 142.47 169.54 86.04 75.47 386.60 148.96 552.49 752.34 276.36 59.91 11.40 25.49 166.34 0.00 42.04 38.52 954.80 234.92 559.08 257.92 168.21 202.14 83 ER25a ExonRegion 0 58.46 288.95 260.40 171.94 185.66 649.80 279.19 591.49 900.73 406.39 72.89 33.25 40.63 248.19 6.94 73.33 47.88 883.36 408.49 586.90 340.53 354.89 391.17 84 E25_Da KnownBoundary 0 224.78 653.96 324.23 221.65 392.36 768.25 392.83 881.57 1252.36 487.38 102.45 80.43 94.31 315.50 8.90 54.09 70.03 850.17 461.38 699.32 369.06 366.42 477.52 85 ER25b ExonRegion 0 69.67 367.90 363.53 261.57 284.89 947.13 430.36 871.78 1243.15 521.94 104.70 69.17 59.97 268.10 10.22 86.65 65.83 1197.22 514.82 697.56 410.22 532.61 510.04 86 E25_Ab KnownBoundary 0 151.95 447.35 451.46 347.24 249.07 692.44 423.26 1008.45 1521.02 723.15 108.19 70.22 39.28 127.20 9.15 70.15 78.45 1024.93 574.51 727.44 535.18 683.98 382.26 87 ER25c ExonRegion 0 106.65 405.97 406.33 279.17 289.93 957.86 448.33 746.57 1060.84 463.46 109.06 61.04 41.31 221.11 10.33 75.69 65.90 1070.84 462.14 619.38 403.25 436.37 420.42 88 E25_Db KnownBoundary 0 78.75 463.14 412.35 293.47 368.85 959.11 441.76 747.63 985.78 399.57 77.81 54.92 58.76 192.89 8.90 117.83 63.02 1258.94 422.79 600.63 337.49 352.77 416.91 89 ER25d ExonRegion 0 347.61 1470.97 825.52 619.72 789.23 1288.38 768.07 1227.45 1329.99 532.34 88.71 71.75 55.43 226.69 9.89 80.65 51.48 693.75 396.99 626.79 263.76 532.23 428.53 90 ER25e ExonRegion 0 0.94 7.68 8.17 4.24 17.24 5.50 6.33 7.68 4.53 2.29 0.00 0.96 0.00 0.18 0.00 0.00 0.00 0.21 0.00 1.18 0.00 0.93 3.26