Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TLL2 Gene 0 1.54 132.95 0.54 0.54 1.25 0.19 0.53 0.54 0.88 0.22 6.16 6.52 2.02 6.32 5.04 1.30 1.99 15.53 1.33 98.58 0.38 2.43 0.85 2 469598 Transcript 0 0.00 1.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.55 0.00 0.00 0.74 1.42 0.07 0.37 1.29 1.12 3.00 0.25 0.00 0.00 3 357947 Transcript 0 0.66 64.35 0.19 0.37 0.34 0.14 0.09 0.52 0.85 0.03 4.83 3.84 0.46 6.28 5.06 1.57 1.71 20.20 0.52 95.73 0.36 3.37 0.34 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.00 1.62 0.00 1.60 0.00 0.00 0.00 5 ER1b ExonRegion 0 0.27 16.41 0.23 0.00 0.35 0.10 0.00 1.29 0.88 0.00 9.93 0.94 3.99 8.63 9.36 2.83 1.87 9.01 1.22 65.81 1.12 1.74 0.74 6 E1a_E2a KnownJunction 0 3.26 71.04 0.00 0.00 0.00 2.90 0.00 5.09 1.48 0.00 28.38 0.00 6.17 9.30 0.00 4.36 8.98 19.40 0.00 109.81 0.00 5.33 0.00 7 ER2a ExonRegion 0 0.00 52.84 0.00 0.00 4.80 0.51 0.00 1.28 0.22 0.00 34.60 3.90 8.11 17.21 25.09 8.09 4.49 33.41 0.00 159.77 1.01 6.10 1.51 8 E2a_E3a KnownJunction 0 0.00 42.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.27 18.46 5.84 17.54 30.04 22.39 14.12 31.88 0.00 139.40 0.00 8.76 0.00 9 ER3a ExonRegion 0 1.38 47.58 0.00 1.31 0.10 2.35 0.00 0.71 0.24 0.00 29.69 6.49 5.17 13.93 21.83 4.42 5.63 22.95 2.08 149.02 0.00 7.24 3.46 10 E3_Da NovelBoundary 0 0.00 5.99 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 8.46 0.00 47.23 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 58.87 0.00 0.00 0.00 0.00 0.00 2.55 1.33 0.00 22.90 19.81 0.00 11.95 19.53 4.02 4.77 28.52 0.00 132.05 2.41 2.39 0.00 12 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 I3 Intron 0 0.25 13.85 0.12 0.21 0.17 0.00 0.26 0.08 0.43 0.04 1.28 3.28 2.70 1.18 0.92 1.31 1.18 4.81 0.30 30.39 0.00 0.20 0.31 14 I3_SR1 SilentIntronRegion 0 0.25 8.43 0.00 0.30 0.20 0.00 0.21 0.04 0.54 0.05 1.16 3.47 2.58 1.21 0.81 1.39 1.16 5.13 0.42 30.08 0.00 0.15 0.34 15 I3_SR2 SilentIntronRegion 0 0.24 27.70 0.41 0.00 0.10 0.00 0.40 0.19 0.14 0.00 1.59 2.80 2.99 1.12 1.21 1.11 1.24 4.02 0.00 31.22 0.00 0.31 0.22 16 E4_Aa NovelBoundary 0 0.00 24.01 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.47 5.40 0.00 0.00 0.00 0.00 8.04 6.76 0.00 37.46 0.00 0.00 0.00 17 ER4a ExonRegion 0 0.69 77.63 1.38 0.66 1.39 0.00 1.30 2.16 1.76 0.00 21.21 10.13 0.00 28.13 23.02 6.86 8.48 29.30 3.84 157.65 0.72 5.70 1.05 18 E4a_E5a KnownJunction 0 0.00 88.27 1.63 0.00 4.16 0.00 0.00 4.89 3.47 0.00 17.95 0.00 0.00 29.08 21.26 8.03 9.26 40.91 4.42 172.32 0.00 13.29 0.00 19 I4 Intron 0 0.48 12.48 0.00 0.15 0.00 0.05 0.27 0.07 0.51 0.09 1.56 1.57 0.82 1.12 0.80 1.43 1.08 3.46 0.40 25.46 0.11 0.05 0.00 20 I4_SR1 SilentIntronRegion 0 0.48 12.49 0.00 0.15 0.00 0.05 0.27 0.07 0.51 0.09 1.56 1.57 0.82 1.12 0.80 1.43 1.08 3.46 0.40 25.49 0.11 0.05 0.00 21 E5_Aa NovelBoundary 0 0.00 22.50 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 4.31 0.00 38.54 0.00 0.00 0.00 22 ER5a ExonRegion 0 3.66 90.61 1.19 0.89 3.95 0.00 0.00 2.24 0.95 0.00 29.83 6.49 2.50 27.44 23.23 4.18 12.98 27.94 6.29 122.32 0.93 3.96 4.95 23 E5_Da NovelBoundary 0 9.71 57.95 0.00 2.00 0.00 0.00 0.00 4.35 1.30 1.21 6.84 0.00 6.82 26.13 18.67 3.85 8.98 17.41 0.00 102.08 0.00 0.00 0.00 24 E5a_E6a KnownJunction 0 0.00 44.53 1.30 0.00 0.00 0.00 0.00 0.00 1.59 0.00 5.26 0.00 6.17 4.65 15.08 0.00 0.00 10.11 4.14 52.92 0.00 0.00 0.00 25 I5 Intron 0 0.32 41.97 0.00 0.15 0.60 0.00 0.00 0.39 0.28 0.13 5.93 4.34 1.44 4.94 3.62 1.78 2.47 7.21 0.95 45.03 0.00 1.09 0.66 26 I5_SR1 SilentIntronRegion 0 0.32 42.10 0.00 0.15 0.60 0.00 0.00 0.39 0.28 0.13 5.94 4.35 1.45 4.96 3.64 1.78 2.48 7.23 0.96 45.16 0.00 1.10 0.66 27 E6_Aa NovelBoundary 0 3.78 26.18 0.00 0.00 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 6.82 4.89 0.00 0.00 0.00 1.95 0.00 37.33 0.00 0.00 0.00 28 ER6a ExonRegion 0 0.60 71.46 0.96 0.85 2.05 0.00 0.38 0.00 3.42 0.00 12.50 7.26 6.00 15.53 11.86 5.70 4.32 28.82 3.22 106.66 0.01 6.73 0.08 29 E6_Da NovelBoundary 0 0.00 56.50 0.00 0.00 3.31 0.00 0.00 0.00 1.07 0.00 4.11 5.85 6.33 2.24 4.82 3.33 0.00 5.10 3.67 26.65 0.00 0.00 0.00 30 E6a_E7a KnownJunction 0 0.00 95.51 1.66 2.06 6.62 0.00 0.00 0.00 0.00 0.00 12.32 12.15 6.82 12.01 9.27 3.85 4.77 18.24 3.76 69.22 0.00 2.94 0.00 31 I6 Intron 0 0.00 39.34 0.20 0.33 0.00 0.00 0.07 0.00 0.30 0.00 0.63 1.97 0.63 0.80 0.22 0.32 0.90 4.76 0.69 23.19 0.24 0.00 0.00 32 I6_SR1 SilentIntronRegion 0 0.00 39.42 0.20 0.33 0.00 0.00 0.07 0.00 0.30 0.00 0.63 1.97 0.63 0.80 0.22 0.32 0.90 4.77 0.70 23.23 0.24 0.00 0.00 33 E7_Aa NovelBoundary 0 0.00 8.29 0.00 2.06 0.00 0.00 0.00 2.55 0.00 0.00 0.00 6.15 0.00 0.00 0.00 0.00 0.00 7.34 3.76 48.26 0.00 0.00 4.35 34 ER7a ExonRegion 0 0.00 87.04 0.29 2.44 1.69 0.00 0.51 0.00 2.28 0.00 23.78 12.13 6.06 20.88 17.98 4.26 5.82 31.90 1.83 111.46 0.00 7.82 0.17 35 E7a_E8a KnownJunction 0 0.00 57.69 0.00 0.00 0.00 0.00 4.24 0.00 3.96 0.00 30.38 0.00 0.00 9.89 14.83 3.33 3.93 24.21 0.00 110.19 0.00 6.18 0.00 36 I7 Intron 0 1.13 27.17 0.14 0.27 0.12 0.02 0.09 0.20 0.18 0.07 0.99 1.77 0.94 1.03 0.64 0.55 0.40 3.41 0.10 28.58 0.07 0.11 0.19 37 I7_SR1 SilentIntronRegion 0 1.13 27.18 0.14 0.27 0.12 0.02 0.09 0.20 0.18 0.07 0.99 1.77 0.94 1.03 0.64 0.55 0.40 3.41 0.10 28.60 0.07 0.11 0.19 38 E8_Aa NovelBoundary 0 0.00 63.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 7.21 0.00 29.08 0.00 0.00 0.00 39 ER8a ExonRegion 0 5.42 116.06 0.00 0.44 2.18 0.00 0.65 0.00 0.43 0.00 21.54 11.12 5.40 13.79 8.96 1.76 5.07 22.23 3.31 100.87 0.90 5.35 1.06 40 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.84 0.00 0.00 0.00 6.30 0.00 0.00 0.00 4.80 6.07 0.00 0.00 0.00 41 E8a_E10a KnownJunction 0 3.33 177.53 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 24.64 6.00 6.82 14.72 29.17 7.01 0.00 29.10 0.00 115.50 0.00 8.51 0.00 42 ER9a ExonRegion 0 0.00 4.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 1.34 0.77 0.00 1.87 2.46 0.81 4.07 1.25 0.00 0.00 43 E9a_E10a KnownJunction 0 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 2.36 0.00 3.26 0.00 0.00 0.00 44 ER10a ExonRegion 0 2.52 125.61 0.23 0.60 0.00 0.00 0.00 0.00 0.81 0.00 18.48 9.07 0.73 17.00 13.83 3.89 2.50 20.18 0.00 103.41 0.00 3.38 2.68 45 E10a_E11a KnownJunction 0 0.00 132.94 3.13 1.47 0.00 0.00 0.00 0.00 0.00 0.00 17.21 7.65 0.00 10.18 18.91 3.25 4.77 24.04 0.00 101.76 0.00 0.00 0.00 46 ER11a ExonRegion 0 0.02 118.80 1.52 1.84 3.69 0.00 2.44 0.00 1.82 0.00 16.10 9.16 7.88 17.42 21.83 6.06 3.27 20.95 0.00 91.47 2.16 4.17 2.39 47 E11a_E12a KnownJunction 0 0.00 92.22 0.00 0.00 11.88 0.00 1.99 0.00 0.00 0.00 24.06 6.30 12.99 25.90 4.82 10.77 8.32 8.87 0.00 98.11 0.00 8.39 3.76 48 ER12a ExonRegion 0 2.64 114.47 1.20 0.89 0.25 0.00 0.84 0.00 0.45 0.74 14.41 9.99 4.97 15.57 20.51 3.56 5.95 20.21 2.67 91.65 0.96 4.45 2.43 49 E12a_E13a KnownJunction 0 0.00 176.61 5.03 0.00 0.00 0.00 1.77 0.00 1.79 0.00 22.11 18.91 0.00 22.25 4.45 0.00 3.65 26.24 0.00 80.92 0.00 0.00 4.27 50 ER13a ExonRegion 0 3.10 120.04 1.73 0.62 0.53 0.00 1.57 0.00 1.07 1.45 20.77 12.04 4.05 11.69 16.10 2.91 2.49 23.70 1.20 108.15 0.77 2.58 1.25 51 E13a_E14a KnownJunction 0 0.00 95.97 6.18 1.37 4.33 0.00 3.71 0.00 1.39 2.53 17.58 12.30 0.00 9.30 9.89 3.50 0.00 42.90 0.00 154.87 0.00 5.57 3.33 52 ER14a ExonRegion 0 1.05 62.01 1.37 0.07 1.03 0.00 0.86 0.00 1.71 1.18 6.36 9.43 2.07 6.98 8.12 0.95 0.89 22.64 0.86 101.48 0.59 3.15 0.12 53 E14_Da NovelBoundary 0 0.00 41.24 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.37 0.00 54.97 0.00 2.20 0.00 54 E14b_E15a KnownJunction 0 0.00 52.95 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 7.06 0.00 0.00 0.00 18.49 0.00 85.71 0.00 8.21 0.00 55 ER14b ExonRegion 0 1.76 57.28 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.97 0.00 0.00 4.87 2.90 0.00 0.00 17.55 0.00 88.65 0.00 6.25 0.00 56 ER15a ExonRegion 0 0.37 40.45 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.78 1.03 0.00 2.13 0.07 0.00 0.00 10.47 0.00 52.75 0.00 1.19 0.00 57 E15a_E16a KnownJunction 0 3.78 23.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 2.47 0.00 0.00 0.00 17.20 0.00 41.35 0.00 2.88 0.00 58 ER16a ExonRegion 0 1.05 38.84 0.00 0.85 0.00 0.00 0.00 0.00 0.64 0.00 0.61 0.32 1.22 2.73 0.65 0.00 0.66 23.38 0.00 84.41 0.89 0.83 0.00 59 E16a_E17a KnownJunction 0 0.00 62.88 0.00 1.83 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 4.19 4.68 21.56 0.00 117.99 2.78 2.69 0.00 60 I16 Intron 0 0.21 7.21 0.00 0.00 0.00 0.00 0.00 0.39 0.28 0.00 0.10 0.91 0.00 0.27 0.20 0.00 0.16 3.22 0.64 22.21 0.00 0.10 0.00 61 I16_SR1 SilentIntronRegion 0 0.21 7.22 0.00 0.00 0.00 0.00 0.00 0.39 0.28 0.00 0.10 0.91 0.00 0.27 0.20 0.00 0.17 3.22 0.64 22.25 0.00 0.10 0.00 62 ER17a ExonRegion 0 0.00 32.94 0.00 1.00 0.00 0.00 0.00 0.00 0.59 0.00 1.63 8.35 0.00 2.07 1.15 0.00 1.28 13.70 0.00 94.37 0.45 1.25 0.00 63 E17a_E18a KnownJunction 0 0.00 37.43 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 25.74 0.00 94.60 0.00 3.12 0.00 64 ER18a ExonRegion 0 0.00 37.52 0.00 0.77 0.00 0.00 0.00 0.00 0.94 0.00 1.56 7.39 0.00 1.16 0.00 0.00 0.18 12.30 0.00 83.55 0.00 0.51 0.00 65 E18a_E19a KnownJunction 0 0.00 43.54 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 11.85 0.00 4.94 0.00 0.00 3.55 19.28 0.00 101.63 0.00 0.00 0.00 66 ER19a ExonRegion 0 0.02 32.78 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 1.54 1.22 0.00 3.51 0.00 0.09 1.13 23.17 0.00 95.98 0.00 0.83 0.00 67 E19a_E20a KnownJunction 0 0.00 38.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 18.74 0.00 107.83 0.00 0.00 0.00 68 ER20a ExonRegion 0 0.49 42.48 0.44 0.00 0.00 0.35 0.00 0.61 0.00 0.41 0.92 0.00 0.00 2.38 1.72 1.97 0.00 16.92 0.00 69.55 0.00 1.18 0.00 69 E20a_E21a KnownJunction 0 0.00 57.69 0.00 0.00 0.00 2.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.58 0.00 68.39 0.00 3.06 0.00 70 I20 Intron 0 0.12 13.50 0.27 0.12 0.08 0.00 0.00 0.15 0.27 0.05 0.23 0.93 0.00 0.54 0.47 0.00 0.48 3.00 0.19 20.88 0.00 0.12 0.34 71 I20_SR1 SilentIntronRegion 0 0.14 14.45 0.24 0.13 0.09 0.00 0.00 0.16 0.30 0.00 0.25 1.04 0.00 0.53 0.27 0.00 0.54 3.31 0.21 21.57 0.00 0.14 0.38 72 ER21a ExonRegion 0 0.43 52.88 0.00 0.00 0.00 0.07 0.00 0.00 0.00 0.00 0.91 0.72 0.00 1.85 1.32 0.69 0.67 14.69 1.23 85.54 0.00 0.71 0.88 73 E21a_E22a KnownJunction 0 0.00 100.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 4.89 4.45 0.00 0.00 22.51 0.00 57.46 0.00 6.25 4.35 74 ER22a ExonRegion 0 2.03 198.16 0.59 0.57 1.58 0.26 0.69 0.62 0.83 0.24 1.79 7.56 1.55 3.06 1.00 0.17 1.21 12.11 1.35 103.05 0.22 2.00 0.81