Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BMS1P4 Gene 0 0.57 0.47 0.07 0.08 0.51 0.56 0.61 0.10 0.07 0.07 1.78 4.56 3.31 1.62 0.65 1.37 2.02 0.42 0.37 0.90 0.42 0.40 0.11 2 441263 Transcript 0 0.47 0.33 0.03 0.03 0.33 0.40 0.43 0.10 0.03 0.12 1.48 4.09 2.88 1.23 0.66 1.06 1.29 0.26 0.22 0.56 0.42 0.35 0.11 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER3a ExonRegion 0 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 Ix Intron 0 7.01 3.84 3.99 3.99 8.47 3.96 9.55 8.97 7.67 2.26 8.30 38.31 34.53 14.55 11.00 14.95 9.64 2.57 2.66 8.30 2.92 5.01 2.52 10 Ix_SR4 SilentIntronRegion 0 7.73 3.13 13.59 4.51 7.95 5.25 9.04 8.63 10.42 4.28 10.40 23.33 17.48 21.04 7.19 19.38 17.06 4.92 3.70 9.87 4.68 10.72 3.35 11 Ix_AR5 ActiveIntronRegion 0 12.88 4.31 5.76 7.08 12.93 6.86 13.32 15.03 12.98 3.70 9.89 57.68 55.46 18.56 17.55 19.52 9.70 2.86 2.81 10.64 1.81 9.17 4.27 12 Ix_SR1 SilentIntronRegion 0 6.77 4.30 3.02 3.32 8.03 2.28 9.52 8.58 6.94 1.82 9.84 36.72 34.69 13.95 11.11 14.90 9.09 2.09 2.77 8.66 4.04 4.13 2.55 13 Ix_AR2 ActiveIntronRegion 0 2.12 0.66 1.87 0.31 6.22 3.03 5.20 0.00 4.38 0.00 8.84 37.56 17.35 6.86 2.97 0.74 0.00 0.00 0.00 4.68 0.00 2.55 0.00 14 Ix_AR1 ActiveIntronRegion 0 1.11 2.67 1.44 2.40 4.92 4.82 5.92 4.06 2.90 1.35 1.52 25.64 17.62 10.15 5.27 9.77 9.55 3.02 2.09 4.47 0.87 0.83 0.39 15 ER4a ExonRegion 0 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 3.29 1.58 2.84 2.81 3.93 2.54 5.38 4.45 6.05 3.55 5.85 4.69 5.75 6.69 4.01 7.96 11.98 5.32 2.75 7.91 6.10 1.80 4.57 18 Ix_AR2 ActiveIntronRegion 0 3.26 0.44 3.11 0.85 2.30 2.25 4.80 2.72 5.62 2.40 6.64 5.34 3.60 8.24 4.18 8.38 13.58 4.75 3.51 6.60 6.29 0.77 3.96 19 Ix_AR1 ActiveIntronRegion 0 3.65 1.36 5.72 9.69 2.68 0.31 4.41 14.21 14.48 9.37 1.18 0.00 7.04 3.25 2.90 1.16 7.52 7.70 0.00 3.66 4.53 2.08 0.82 20 Ix_SR1 SilentIntronRegion 0 5.88 5.84 2.85 13.00 15.49 6.54 10.25 13.54 10.04 10.51 5.55 4.28 19.26 4.15 5.39 10.45 12.04 11.46 1.91 17.00 9.72 6.89 10.40 21 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 22 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.07 0.00 0.00 0.00 1.24 0.00 0.74 0.00 0.00 0.00 0.00 0.00 24 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E7_Aa NovelBoundary 0 0.00 9.27 2.51 1.73 19.52 2.56 17.05 6.94 8.33 11.31 7.58 6.30 7.63 2.47 0.00 8.03 11.97 19.44 0.00 24.35 2.66 2.94 3.93 26 ER7a ExonRegion 0 1.08 1.65 0.50 0.55 2.18 1.99 2.15 0.00 0.50 0.46 3.66 5.76 5.24 4.54 0.00 3.23 8.95 1.27 1.73 4.04 0.00 0.57 0.00 27 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER8a ExonRegion 0 0.11 0.03 0.00 0.00 0.00 0.03 0.00 0.01 0.00 0.00 0.03 0.22 0.13 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 Ix Intron 0 8.96 8.61 0.26 2.87 8.12 4.01 11.39 9.08 7.53 2.53 12.82 33.63 33.84 15.53 7.79 14.05 12.81 5.38 1.12 9.46 5.60 11.76 10.36 31 Ix_SR1 SilentIntronRegion 0 5.02 6.51 0.12 2.53 4.87 2.95 6.25 4.64 3.64 1.10 14.51 21.39 17.99 13.04 3.93 9.85 13.26 5.30 0.77 6.73 6.10 7.54 8.46 32 Ix_AR1 ActiveIntronRegion 0 14.60 11.61 0.45 3.35 12.77 5.54 18.75 15.43 13.09 4.58 10.44 51.15 56.52 19.14 13.30 20.07 12.21 5.52 1.64 13.37 4.90 17.79 13.09 33 Ix Intron 0 7.67 9.92 2.54 2.26 9.69 6.38 11.99 7.54 3.33 1.66 24.78 61.04 52.12 24.93 11.99 20.70 19.31 1.54 3.11 13.04 5.22 11.03 8.59 34 Ix_SR1 SilentIntronRegion 0 7.70 9.97 2.56 2.28 9.74 6.42 12.06 7.58 3.35 1.67 24.91 61.36 52.40 25.06 12.05 20.81 19.41 1.55 3.12 13.11 5.25 11.09 8.63 35 E9_Aa NovelBoundary 0 13.56 6.25 5.17 12.69 28.44 7.89 30.65 4.15 22.57 5.00 29.38 155.00 73.53 37.55 21.14 6.66 21.32 4.81 0.00 8.82 0.00 14.14 14.85 36 ER9a ExonRegion 0 5.51 3.94 0.00 0.00 3.50 4.75 5.19 1.66 0.00 0.00 21.44 63.55 43.59 15.89 11.16 13.60 12.95 1.80 2.08 5.56 7.20 5.45 1.92