Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-137L10.2 Gene 0 13.74 2.24 2.78 3.42 10.97 2.89 6.05 4.53 4.99 1.62 6.55 10.53 19.71 21.27 18.34 17.41 14.92 2.20 2.09 4.87 5.62 6.68 7.87 2 422977 Transcript 0 27.48 2.90 2.54 2.25 21.19 4.74 15.10 3.92 6.85 1.15 8.67 8.86 15.70 26.33 25.11 24.04 27.14 2.48 3.39 5.30 8.45 7.28 12.30 3 442133 Transcript 0 21.70 1.28 0.75 3.59 8.31 0.92 4.25 3.66 3.66 2.54 4.65 5.06 25.30 23.69 12.53 22.28 13.49 0.25 2.75 3.06 7.01 8.44 9.77 4 439792 Transcript 0 9.33 0.76 1.27 1.73 7.47 1.50 2.32 2.99 1.59 0.06 0.23 7.38 2.55 10.99 9.87 5.21 6.97 0.21 0.36 1.64 0.98 0.98 2.74 5 ER1a ExonRegion 0 13.58 1.98 1.74 0.71 6.46 6.89 4.82 2.88 5.96 2.38 5.22 0.62 0.67 7.05 14.03 11.50 17.30 5.90 3.71 11.48 12.46 7.16 7.77 6 E1_Da NovelBoundary 0 5.85 7.30 0.00 0.00 0.00 6.98 3.49 1.68 2.34 0.00 0.00 6.00 6.66 24.49 0.00 7.09 7.76 1.82 0.00 11.12 16.80 2.69 4.35 7 E1a_E2a KnownJunction 0 62.97 3.03 1.83 0.00 54.41 8.69 40.50 2.55 6.80 0.00 7.79 0.00 6.01 34.20 44.38 34.01 40.86 0.00 4.42 0.00 9.45 8.63 20.32 8 ER2a ExonRegion 0 13.82 2.91 1.61 3.83 11.04 1.63 9.00 1.83 8.39 0.62 11.38 5.49 21.93 19.57 15.26 20.03 32.99 2.76 2.65 6.05 7.90 3.48 8.19 9 E2_Ab KnownBoundary 0 0.00 12.63 6.24 5.06 10.70 5.79 10.78 6.49 9.69 2.55 17.53 37.96 63.31 44.26 15.45 36.57 61.80 1.62 0.00 0.00 6.18 8.39 7.85 10 ER2b ExonRegion 0 14.65 4.09 4.79 8.27 25.09 8.56 19.39 8.95 7.51 2.43 15.89 25.09 37.75 42.07 31.74 31.39 25.65 2.74 3.23 8.45 6.21 9.19 13.92 11 E2_Da KnownBoundary 0 34.75 3.35 3.73 14.92 28.27 5.11 11.97 7.64 5.21 1.64 19.79 43.51 84.09 42.38 43.51 26.49 8.23 0.00 0.00 14.19 3.15 21.43 8.11 12 E2a_E4a KnownJunction 0 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 13 ER2c ExonRegion 0 19.55 3.70 4.99 4.48 12.85 1.77 6.08 8.45 6.27 1.60 10.30 29.33 34.19 44.49 26.75 30.61 17.43 1.28 2.76 3.68 3.99 9.84 12.92 14 E2_Db NovelBoundary 0 45.12 8.62 8.57 8.49 40.83 5.51 26.50 5.01 5.87 0.00 2.00 30.76 42.21 24.37 14.71 27.26 12.81 2.36 0.00 8.76 11.43 6.06 24.41 15 I2 Intron 0 9.24 3.28 1.72 3.14 13.48 1.11 4.27 3.81 5.57 1.26 4.93 21.24 27.24 16.05 10.27 11.58 11.09 1.79 4.92 3.15 4.00 3.92 7.70 16 I2_AR1 ActiveIntronRegion 0 11.06 4.45 2.10 2.23 11.82 1.53 3.64 2.21 5.06 0.91 3.23 24.74 23.93 18.44 12.13 11.07 12.22 2.05 3.72 3.59 4.64 5.28 6.52 17 I2_SR1 SilentIntronRegion 0 6.93 1.77 1.23 4.35 15.74 0.57 5.12 5.92 6.25 1.73 7.18 16.76 31.73 13.02 7.92 12.32 9.68 1.46 6.53 2.58 3.19 2.16 9.28 18 E3_Aa NovelBoundary 1 167.36 170.04 129.06 110.21 149.83 106.70 243.82 115.01 84.29 79.83 103.03 39.76 36.52 41.09 96.05 133.13 194.67 99.65 126.22 177.75 107.86 53.64 133.00 19 ER3a ExonRegion 0 3.91 0.00 0.30 0.39 3.71 0.25 0.73 1.22 0.25 0.00 0.63 1.44 2.93 7.15 6.54 3.98 2.22 0.01 0.00 0.00 0.36 1.05 1.18 20 E3_Da NovelBoundary 0 24.82 29.27 24.42 27.47 27.67 40.72 17.22 18.40 41.98 15.74 24.22 6.30 6.82 17.07 22.99 20.08 31.51 39.92 52.80 28.19 29.04 20.64 40.38 21 E3a_E4a KnownJunction 0 18.45 0.00 0.00 1.50 12.82 2.21 2.25 3.94 1.30 0.00 0.00 11.85 0.00 24.37 19.66 8.20 13.56 0.00 0.00 0.00 0.00 0.00 4.35 22 Ix Intron 0 20.99 0.52 4.00 2.88 10.00 3.54 5.63 2.32 8.30 0.66 2.24 6.17 13.18 8.49 7.21 8.80 14.46 1.78 0.41 1.92 1.98 2.95 6.05 23 Ix_SR1 SilentIntronRegion 0 21.25 0.53 4.04 2.91 10.11 3.59 5.70 2.35 8.40 0.67 2.27 6.25 13.35 8.60 7.28 8.92 14.61 1.80 0.42 1.94 2.01 2.99 6.11 24 E4_Aa NovelBoundary 0 13.34 3.35 0.00 2.06 3.48 0.00 10.33 6.00 2.46 2.63 0.00 5.70 6.49 13.42 14.34 0.00 0.00 0.00 0.00 2.49 9.02 0.00 8.71 25 ER4a ExonRegion 0 34.49 4.35 5.63 6.99 26.33 2.15 12.72 7.87 7.67 2.16 13.76 25.88 54.18 47.51 53.06 52.71 33.64 7.02 4.64 11.11 7.76 17.27 17.74 26 E4_Da KnownBoundary 0 6.74 12.23 12.12 13.62 0.00 6.93 17.40 11.13 11.78 6.74 0.00 23.11 6.82 7.12 5.19 9.74 16.36 13.27 0.00 10.55 7.35 3.12 11.52 27 E4a_E5a KnownJunction 0 48.60 0.00 0.00 8.99 17.32 2.33 9.49 4.52 5.73 4.24 8.00 6.30 61.03 42.85 10.51 58.02 38.15 0.00 4.80 5.88 5.81 18.19 20.06 28 ER4b ExonRegion 0 5.65 2.28 3.52 3.30 5.89 2.02 3.98 3.81 3.23 0.17 0.06 8.85 4.72 1.45 3.42 3.44 5.13 0.64 1.08 4.93 2.57 1.89 2.68 29 E4_Db NovelBoundary 0 11.34 0.00 3.67 3.13 4.07 5.79 2.03 3.86 7.09 2.79 0.00 0.00 6.49 2.47 0.00 8.29 4.21 0.00 0.00 0.00 0.00 2.27 0.00 30 E5_Aa NovelBoundary 0 16.37 5.79 12.42 7.49 4.33 0.00 3.80 6.28 3.12 0.00 0.00 0.00 6.82 2.41 4.45 11.62 17.20 0.00 0.00 2.36 2.59 4.78 0.00 31 ER5a ExonRegion 0 40.67 5.83 1.05 5.94 15.90 1.05 5.07 6.18 4.33 4.86 10.38 10.70 39.15 45.44 35.04 30.52 17.39 0.00 3.65 5.57 14.34 12.27 16.46 32 E5_Da NovelBoundary 0 20.60 6.71 2.78 3.53 37.10 2.84 23.85 10.97 14.12 6.45 0.00 5.70 20.45 22.66 8.90 11.88 9.07 1.95 8.56 6.39 8.03 3.00 4.01 33 E5a_E6a KnownJunction 0 6.96 0.00 0.00 0.00 0.00 0.00 4.20 4.35 3.59 1.67 2.42 6.30 7.30 17.13 5.32 15.21 4.49 0.00 4.71 0.00 11.61 5.57 8.71 34 Ix Intron 0 33.28 7.60 5.60 6.04 17.44 7.74 11.93 6.67 10.23 2.29 2.59 20.17 33.72 16.51 14.46 23.07 11.39 7.22 2.75 5.30 6.13 6.39 7.60 35 Ix_AR1 ActiveIntronRegion 0 34.50 7.87 5.85 6.27 18.07 7.90 12.45 6.96 10.56 2.40 2.66 20.72 34.37 17.04 14.90 23.69 11.87 7.39 2.87 5.54 6.10 6.66 7.86 36 E6_Aa NovelBoundary 0 31.41 9.21 8.40 7.49 28.27 20.05 14.40 12.49 12.21 2.58 7.32 17.86 26.13 22.19 39.68 36.23 9.54 8.54 0.00 17.39 2.35 5.76 12.29 37 Ix_SR1 SilentIntronRegion 0 6.65 1.84 0.00 0.97 3.82 4.54 0.44 0.08 3.18 0.00 1.20 8.87 21.22 5.18 5.25 10.33 0.79 3.87 0.00 0.00 7.14 0.40 1.96 38 ER6a ExonRegion 0 8.40 0.55 2.72 3.00 8.33 1.24 2.51 3.23 4.67 1.95 2.47 2.00 19.01 10.52 11.79 7.66 7.44 1.24 0.60 0.57 3.27 6.17 3.63