Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC022400.1 Gene 0 25.14 24.97 17.54 16.59 25.25 30.97 29.47 27.91 30.69 14.89 25.45 22.35 23.97 29.41 25.98 47.93 34.73 66.93 34.19 45.50 21.92 21.60 35.68 2 449532 Transcript 0 5.41 9.12 4.41 4.03 9.06 10.39 12.54 6.70 7.67 3.45 10.39 6.02 6.06 11.64 9.43 20.39 12.33 14.78 9.31 13.15 8.18 5.40 11.89 3 IG36 Intergenic 0 13.80 16.06 4.36 6.50 13.44 13.15 11.58 11.16 24.98 8.52 12.14 19.70 17.31 18.35 18.04 18.18 13.37 23.74 13.03 25.17 9.19 15.02 15.47 4 IG36_AR1 ActiveIntergenicRegion 0 13.83 16.09 4.37 6.51 13.46 13.17 11.60 11.18 25.01 8.53 12.16 19.74 17.33 18.37 18.07 18.21 13.39 23.78 13.05 25.20 9.21 15.05 15.49 5 ER1a ExonRegion 0 0.00 17.32 4.14 2.83 18.60 18.94 29.29 3.05 4.77 0.00 14.71 0.00 3.52 21.11 19.76 34.60 17.69 6.21 8.46 16.49 13.64 4.98 16.84 6 E1_Da NovelBoundary 0 177.74 42.56 7.48 4.56 23.68 33.16 25.61 14.21 19.24 14.24 20.79 0.00 6.82 17.01 10.01 103.31 58.16 38.18 46.02 14.51 14.95 37.35 132.57 7 E1a_E2a KnownJunction 0 0.00 57.42 12.06 9.72 65.45 73.25 112.53 9.32 13.28 0.00 44.70 0.00 6.82 62.98 23.36 130.31 62.65 14.76 31.06 55.67 46.89 0.00 56.51 8 Ix_AR1 ActiveIntronRegion 0 2.49 2.77 2.83 1.16 1.42 2.44 3.28 5.12 4.02 1.33 4.11 1.76 5.20 5.46 4.97 14.09 12.21 6.57 4.53 3.39 6.44 3.43 7.28 9 ER2a ExonRegion 0 0.00 3.63 3.90 2.78 4.28 4.49 10.09 4.09 4.87 0.00 10.59 0.00 0.96 18.27 11.34 26.88 19.54 6.60 7.71 14.76 11.96 0.00 13.32 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 8.64 0.69 0.35 9.14 11.81 20.61 0.00 0.45 0.00 0.00 0.00 0.86 0.44 0.20 5.05 0.00 2.47 0.64 0.48 0.00 0.00 1.75 12 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER4a ExonRegion 0 0.00 2.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 0.00 14 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 Ix Intron 0 7.01 3.84 3.99 3.99 8.47 3.96 9.55 8.97 7.67 2.26 8.30 38.31 34.53 14.55 11.00 14.95 9.64 2.57 2.66 8.30 2.92 5.01 2.52 16 Ix_SR4 SilentIntronRegion 0 7.73 3.13 13.59 4.51 7.95 5.25 9.04 8.63 10.42 4.28 10.40 23.33 17.48 21.04 7.19 19.38 17.06 4.92 3.70 9.87 4.68 10.72 3.35 17 Ix_AR5 ActiveIntronRegion 0 12.88 4.31 5.76 7.08 12.93 6.86 13.32 15.03 12.98 3.70 9.89 57.68 55.46 18.56 17.55 19.52 9.70 2.86 2.81 10.64 1.81 9.17 4.27 18 Ix_SR1 SilentIntronRegion 0 6.77 4.30 3.02 3.32 8.03 2.28 9.52 8.58 6.94 1.82 9.84 36.72 34.69 13.95 11.11 14.90 9.09 2.09 2.77 8.66 4.04 4.13 2.55 19 Ix_AR2 ActiveIntronRegion 0 2.12 0.66 1.87 0.31 6.22 3.03 5.20 0.00 4.38 0.00 8.84 37.56 17.35 6.86 2.97 0.74 0.00 0.00 0.00 4.68 0.00 2.55 0.00 20 Ix_AR1 ActiveIntronRegion 0 1.11 2.67 1.44 2.40 4.92 4.82 5.92 4.06 2.90 1.35 1.52 25.64 17.62 10.15 5.27 9.77 9.55 3.02 2.09 4.47 0.87 0.83 0.39 21 ER5a ExonRegion 0 0.57 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 22 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 Ix Intron 0 3.29 1.58 2.84 2.81 3.93 2.54 5.38 4.45 6.05 3.55 5.85 4.69 5.75 6.69 4.01 7.96 11.98 5.32 2.75 7.91 6.10 1.80 4.57 24 Ix_AR2 ActiveIntronRegion 0 3.26 0.44 3.11 0.85 2.30 2.25 4.80 2.72 5.62 2.40 6.64 5.34 3.60 8.24 4.18 8.38 13.58 4.75 3.51 6.60 6.29 0.77 3.96 25 Ix_AR1 ActiveIntronRegion 0 3.65 1.36 5.72 9.69 2.68 0.31 4.41 14.21 14.48 9.37 1.18 0.00 7.04 3.25 2.90 1.16 7.52 7.70 0.00 3.66 4.53 2.08 0.82 26 Ix_SR1 SilentIntronRegion 0 5.88 5.84 2.85 13.00 15.49 6.54 10.25 13.54 10.04 10.51 5.55 4.28 19.26 4.15 5.39 10.45 12.04 11.46 1.91 17.00 9.72 6.89 10.40 27 ER6a ExonRegion 0 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER7a ExonRegion 0 0.00 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 2.66 0.00 0.00 0.00 0.00 30 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER8a ExonRegion 0 0.30 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.41 0.00 0.00 0.00 2.32 1.08 0.00 0.00 0.00 0.00 0.80 0.00 0.00 32 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 Ix Intron 0 8.96 8.61 0.26 2.87 8.12 4.01 11.39 9.08 7.53 2.53 12.82 33.63 33.84 15.53 7.79 14.05 12.81 5.38 1.12 9.46 5.60 11.76 10.36 34 Ix_SR1 SilentIntronRegion 0 5.02 6.51 0.12 2.53 4.87 2.95 6.25 4.64 3.64 1.10 14.51 21.39 17.99 13.04 3.93 9.85 13.26 5.30 0.77 6.73 6.10 7.54 8.46 35 Ix_AR1 ActiveIntronRegion 0 14.60 11.61 0.45 3.35 12.77 5.54 18.75 15.43 13.09 4.58 10.44 51.15 56.52 19.14 13.30 20.07 12.21 5.52 1.64 13.37 4.90 17.79 13.09 36 ER9a ExonRegion 0 0.43 0.69 0.00 0.00 0.66 0.62 0.28 0.00 0.16 0.00 0.00 0.00 0.00 0.44 0.10 1.89 0.00 0.12 0.00 0.00 0.00 0.00 0.00 37 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 Ix Intron 0 7.67 9.92 2.54 2.26 9.69 6.38 11.99 7.54 3.33 1.66 24.78 61.04 52.12 24.93 11.99 20.70 19.31 1.54 3.11 13.04 5.22 11.03 8.59 39 Ix_SR1 SilentIntronRegion 0 7.70 9.97 2.56 2.28 9.74 6.42 12.06 7.58 3.35 1.67 24.91 61.36 52.40 25.06 12.05 20.81 19.41 1.55 3.12 13.11 5.25 11.09 8.63 40 Ix Intron 0 12.66 11.10 5.71 5.40 11.75 6.63 9.98 11.40 9.88 3.83 22.81 41.86 39.21 22.10 15.38 21.70 21.71 7.28 4.78 12.27 8.32 10.84 10.08 41 Ix_SR4 SilentIntronRegion 0 14.72 22.36 5.67 7.71 13.56 5.97 14.76 16.24 14.17 5.03 25.35 74.59 58.30 28.49 17.96 28.25 25.39 5.62 4.59 17.79 6.82 15.57 10.82 42 Ix_AR8 ActiveIntronRegion 0 30.31 17.64 15.88 11.88 25.18 16.80 22.57 26.61 22.21 9.70 58.71 82.37 84.57 53.56 35.85 50.81 57.04 20.67 13.54 30.14 26.51 24.34 25.06 43 Ix_AR7 ActiveIntronRegion 0 44.20 22.49 9.88 12.03 19.52 6.80 15.11 23.89 26.01 6.54 52.76 59.34 28.97 38.79 24.06 59.09 55.14 24.35 15.93 26.78 14.00 20.84 30.92 44 Ix_AR6 ActiveIntronRegion 0 33.20 18.41 11.03 11.00 19.94 7.61 16.21 7.93 12.57 3.42 32.30 30.31 24.99 29.95 15.78 38.68 24.33 10.53 8.07 11.77 8.81 9.33 23.25 45 ER10a ExonRegion 0 6.33 1.10 0.09 2.95 1.06 2.17 2.81 5.04 3.86 1.29 9.65 8.66 8.51 12.02 12.37 15.44 7.40 4.47 6.64 7.57 2.89 6.86 10.65 46 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER11a ExonRegion 0 4.53 8.42 4.53 1.92 2.45 1.03 0.78 4.72 8.05 4.32 23.40 10.61 3.78 16.15 15.72 17.96 14.06 9.66 4.66 5.51 10.88 12.88 16.55 48 E11a_E12a KnownJunction 0 3.78 7.96 1.69 1.53 4.16 0.00 0.00 8.50 10.59 8.86 36.69 24.61 12.99 24.55 32.39 51.95 23.38 6.51 9.22 12.66 14.64 8.94 15.45 49 Ix Intron 0 26.60 15.38 14.59 10.14 20.74 11.04 12.94 14.66 23.77 7.50 11.00 21.50 28.31 10.53 11.43 15.24 12.34 8.86 12.56 13.54 5.85 7.72 9.72 50 Ix_SR3 SilentIntronRegion 0 9.83 5.62 6.03 8.00 9.81 5.71 6.66 5.73 14.32 4.34 4.56 15.87 18.96 4.68 4.68 4.72 3.38 1.11 3.44 5.15 0.70 3.85 2.42 51 Ix_AR2 ActiveIntronRegion 0 50.60 30.80 18.37 19.80 37.47 17.16 15.53 28.03 48.64 20.26 27.59 47.40 62.39 27.16 24.43 37.92 41.62 23.90 24.22 30.61 18.56 20.27 27.45 52 Ix_SR2 SilentIntronRegion 0 88.95 53.44 24.15 21.98 37.57 25.22 28.32 26.41 43.02 10.80 6.02 45.90 50.11 10.35 15.42 11.93 7.66 7.63 11.72 12.27 0.15 12.37 12.35 53 Ix_AR1 ActiveIntronRegion 0 66.48 34.33 61.60 21.95 56.48 29.12 40.62 46.79 57.40 12.73 14.41 26.19 57.60 13.00 17.00 31.38 15.68 23.70 39.24 29.24 9.49 12.24 18.06 54 E12_Aa NovelBoundary 0 20.67 48.81 66.23 63.36 35.99 67.40 86.87 148.20 153.73 49.67 73.28 127.99 112.01 45.21 23.86 111.77 103.88 153.05 90.17 129.30 27.24 43.23 103.80 55 ER12a ExonRegion 0 108.47 99.45 74.27 70.61 102.50 126.61 111.95 119.26 130.38 64.94 97.74 94.60 101.95 111.68 99.39 183.74 137.02 289.12 143.18 189.31 86.37 90.57 142.44