Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BMS1P5 Gene 0 6.40 8.85 11.62 12.55 5.05 10.42 4.33 15.84 16.83 6.26 2.27 1.84 3.15 3.39 4.00 5.79 3.95 9.59 4.52 6.95 3.24 4.94 4.76 2 449800 Transcript 0 0.47 0.92 0.49 0.34 0.64 0.66 0.59 0.46 0.96 0.32 0.24 0.41 0.45 0.27 0.41 0.51 0.43 0.78 0.46 0.60 0.22 0.31 0.46 3 436180 Transcript 0 0.53 3.56 0.31 1.33 0.00 2.75 1.32 1.47 0.93 0.86 0.00 1.08 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.00 0.73 4 445434 Transcript 0 1.58 3.35 3.82 2.65 0.00 4.39 1.27 5.06 8.32 3.43 1.26 2.32 0.46 2.11 1.10 1.67 1.20 7.05 1.32 2.13 1.64 1.84 2.82 5 425187 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.35 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.00 0.40 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER5a ExonRegion 0 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER6a ExonRegion 0 0.00 2.44 0.00 0.00 0.00 0.00 1.41 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E6_Ab KnownBoundary 0 56.97 82.29 50.23 44.18 20.54 108.01 145.65 79.97 94.50 117.31 81.02 28.51 22.24 17.07 6.30 158.33 118.47 142.39 31.15 66.41 33.11 33.62 68.46 18 ER6b ExonRegion 0 0.00 2.06 0.40 0.00 0.00 1.05 4.44 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 0.00 0.00 0.00 0.00 1.72 19 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER7a ExonRegion 0 0.08 1.61 2.40 0.34 0.00 1.91 1.45 0.85 1.34 1.87 0.00 0.00 0.00 0.97 0.75 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.13 21 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER8a ExonRegion 0 2.71 0.92 1.26 2.87 1.47 2.29 2.85 2.04 1.01 0.05 0.44 0.00 0.00 4.28 2.53 5.05 1.81 6.36 5.69 1.33 0.00 3.36 6.98 23 E8_Da KnownBoundary 0 6.89 18.55 2.99 9.09 3.48 14.65 6.36 6.65 4.05 1.07 7.48 6.30 13.64 11.95 10.75 11.02 8.13 5.06 8.85 8.31 0.00 14.27 17.41 24 E8a_E9c KnownJunction 0 0.00 0.00 0.00 3.96 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 25 ER8b ExonRegion 0 5.60 7.80 4.69 4.03 5.93 7.96 5.70 5.47 11.55 3.88 2.87 3.62 5.35 3.20 4.94 6.16 5.17 9.40 5.47 7.22 2.60 3.74 5.55 26 I8_SR1 SilentIntronRegion 0 3.03 6.09 19.06 9.53 9.06 14.89 6.11 12.78 47.31 5.14 11.90 4.14 19.39 10.17 6.52 20.06 16.24 25.69 10.17 22.98 6.89 6.57 9.89 27 I8_AR3 ActiveIntronRegion 0 0.00 0.00 18.24 19.28 0.00 0.00 0.00 30.37 19.16 14.61 1.93 0.74 3.22 7.52 0.00 5.94 3.58 8.97 1.55 13.01 2.27 3.81 21.31 28 E9_Aa NovelBoundary 0 0.00 0.00 4.08 1.56 7.81 29.47 4.37 20.33 33.39 21.06 12.42 0.00 0.00 17.31 8.90 24.61 17.95 12.68 22.40 9.78 14.33 28.29 41.66 29 ER9a ExonRegion 0 3.33 5.30 11.06 6.12 0.00 9.50 0.71 13.44 22.48 9.16 3.79 1.18 1.38 6.33 3.30 5.01 3.59 20.54 3.97 6.38 4.91 4.82 7.48 30 E9_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER9b ExonRegion 0 0.13 0.59 14.51 4.06 0.00 7.48 0.44 11.37 17.98 4.53 1.25 0.16 0.12 3.57 0.97 3.01 2.01 22.24 4.77 5.63 3.00 0.92 3.30 32 E9_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER9c ExonRegion 0 2.48 2.66 2.93 2.97 0.00 9.79 0.89 3.20 3.96 1.26 0.00 0.97 0.95 2.31 3.07 3.99 0.00 13.34 2.88 1.67 0.14 0.91 3.06 34 E9_Da NovelBoundary 0 3.48 3.35 16.03 52.07 8.57 10.73 3.84 53.36 51.65 38.36 0.00 0.00 0.00 4.65 0.00 7.18 3.83 19.44 0.00 22.63 5.44 13.35 7.68 35 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E9a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 I9 Intron 0 4.11 7.05 7.59 19.14 5.93 12.71 2.57 22.85 25.00 10.66 1.34 1.98 3.25 1.13 2.98 6.59 2.29 7.13 3.09 8.26 7.33 7.80 8.95 38 I9_SR1 SilentIntronRegion 0 4.13 7.08 7.63 19.24 5.97 12.78 2.58 22.97 25.13 10.72 1.35 1.99 3.27 1.13 3.00 6.63 2.29 7.17 3.11 8.31 7.37 7.84 9.00 39 ER10a ExonRegion 0 2.62 11.99 0.99 2.18 2.04 4.11 1.64 2.24 2.41 0.72 0.00 2.78 0.00 0.00 0.00 1.06 0.00 1.88 0.00 0.00 0.00 0.00 2.72 40 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E10b_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER10b ExonRegion 0 2.12 14.24 1.23 1.36 0.00 11.00 5.30 3.46 3.71 3.44 0.00 4.33 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 2.94 43 ER11a ExonRegion 0 1.41 4.75 0.41 1.82 0.00 3.67 3.09 1.73 2.47 1.15 0.00 5.77 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.69 0.98 44 ER11b ExonRegion 0 2.24 4.28 6.43 8.32 0.00 6.96 6.81 8.34 13.33 3.54 0.00 1.85 0.00 0.14 0.64 0.31 0.00 2.09 0.00 0.44 0.00 1.44 0.86 45 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER12a ExonRegion 0 2.06 3.08 20.62 40.89 0.00 7.13 2.23 40.89 40.86 5.96 0.00 1.36 0.00 2.23 4.81 4.50 0.00 4.38 2.55 6.75 0.00 9.70 11.66 47 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E12a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER13a ExonRegion 0 0.00 0.00 0.00 0.11 1.27 0.00 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER14a ExonRegion 0 5.64 3.33 22.91 67.54 0.30 3.51 1.18 71.01 51.33 11.76 0.00 3.73 0.00 6.41 9.75 17.34 1.47 9.19 8.32 11.05 0.00 10.76 20.72 52 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER15a ExonRegion 0 11.33 2.27 17.25 43.77 0.00 0.43 0.00 50.16 37.59 12.77 1.48 0.00 0.00 7.52 5.86 5.07 8.48 8.26 5.12 20.40 0.00 10.50 3.34 54 E15_Da NovelBoundary 0 12.74 2.57 6.15 5.19 13.84 0.00 11.35 0.00 10.50 1.53 9.21 0.00 0.00 2.24 0.00 15.12 8.42 1.53 3.86 0.00 0.00 0.00 3.67 55 E15b_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER15b ExonRegion 0 21.17 6.10 12.25 14.99 0.00 0.00 0.00 22.47 22.23 12.62 1.93 0.00 0.00 0.00 0.00 0.00 3.30 3.70 0.00 6.38 0.00 4.17 0.00 57 ER16a ExonRegion 0 13.85 18.86 31.57 35.93 9.46 22.84 6.23 44.09 36.48 14.70 3.26 0.48 3.07 5.53 5.73 9.83 5.56 13.85 6.45 12.21 7.16 11.00 6.11