Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PSAP Gene 0 1258.07 575.99 1143.53 826.98 1183.48 2698.85 731.01 1351.22 2170.16 925.48 2032.28 1191.78 1153.54 2980.55 2707.21 2521.92 1047.05 1378.13 1066.03 674.43 5357.29 3756.82 3194.71 2 394936 Transcript 0 107.94 7.41 2.18 3.41 13.38 19.72 2.77 9.51 7.88 2.29 12.56 6.49 4.69 9.78 20.31 10.40 11.55 4.76 1.59 4.26 25.44 4.14 24.15 3 357471 Transcript 0 0.00 0.00 0.00 0.05 0.00 0.20 0.00 0.19 0.09 0.00 0.07 0.00 0.17 0.36 0.00 0.00 0.12 0.21 0.00 0.00 1.06 0.00 0.00 4 394934 Transcript 1 33.49 61.83 106.15 100.39 37.86 272.00 30.38 99.93 240.51 66.91 44.17 0.00 0.00 5.77 17.68 17.43 23.47 188.32 102.97 83.28 572.99 185.42 182.93 5 373120 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 402059 Transcript 0 174.64 363.46 542.47 406.98 311.67 1554.44 222.39 510.28 1311.08 314.31 340.69 187.56 145.44 424.13 382.41 348.80 182.11 1143.35 903.94 529.57 4090.88 1443.56 1333.52 7 394929 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 404083 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 394940 Transcript 0 68.98 38.22 22.97 6.16 63.67 179.44 50.70 13.68 24.28 6.96 76.70 129.94 118.01 276.06 295.82 161.07 56.57 19.69 60.80 38.99 282.08 155.41 196.08 10 493143 Transcript 1 163.93 57.22 50.92 37.67 72.52 139.56 48.82 80.79 88.69 45.70 145.10 78.45 41.80 203.92 110.55 183.13 88.10 76.48 72.75 40.86 144.67 100.24 98.93 11 495196 Transcript 0 17.30 16.19 23.32 14.31 15.94 55.44 18.27 21.58 30.33 16.33 28.00 15.38 13.49 32.43 27.64 35.72 17.88 33.43 18.97 13.33 63.28 42.60 35.40 12 ER1a ExonRegion 0 0.00 0.59 0.68 0.00 0.00 8.27 0.24 0.00 0.93 0.00 0.00 0.00 0.00 0.07 0.00 0.00 0.00 2.14 0.00 0.00 0.20 2.04 1.31 13 E1_Ab KnownBoundary 0 0.00 2.96 1.63 0.00 0.00 23.74 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.96 0.00 0.00 2.47 2.63 4.27 14 ER1b ExonRegion 0 82.35 114.86 34.38 21.25 89.29 516.04 119.79 41.48 77.79 33.13 132.22 12.91 31.01 121.63 109.87 184.27 124.21 267.62 393.98 93.34 276.08 192.34 253.75 15 E1_Ac KnownBoundary 0 283.75 361.78 22.83 25.07 255.77 1396.70 335.77 41.36 47.19 29.12 394.94 11.55 72.24 363.83 345.63 593.43 372.88 268.95 1266.39 269.35 751.15 520.85 808.90 16 E1_Ad KnownBoundary 0 685.83 455.45 251.47 152.69 524.11 2056.37 507.16 342.27 585.24 222.20 561.56 30.61 45.94 596.04 807.22 1253.86 555.68 1404.11 1878.64 570.72 1772.64 1703.21 1562.66 17 ER1c ExonRegion 1 455.05 432.14 164.93 102.22 414.34 1925.12 458.36 254.17 401.60 154.83 591.95 28.57 72.70 593.94 585.62 1050.20 560.49 1105.23 1786.19 468.40 1521.33 1310.95 1365.25 18 ER1d ExonRegion 1 843.63 400.44 249.80 157.40 578.81 3695.77 735.55 386.35 707.77 301.32 1083.43 64.00 99.51 2301.89 1426.45 2232.97 799.77 991.14 1193.77 439.65 3732.16 3269.34 3026.36 19 E1a_E2a KnownJunction 0 331.91 124.25 217.70 175.34 186.08 1341.22 302.21 306.33 685.24 319.76 198.73 179.31 185.86 317.09 289.76 438.35 177.93 376.52 75.58 103.99 855.31 880.72 647.39 20 ER2a ExonRegion 0 122.03 109.46 381.02 239.85 78.75 425.51 82.69 476.76 965.13 417.14 1253.86 411.53 358.72 1181.17 908.37 838.41 818.92 529.35 817.02 504.67 3546.01 1739.26 1059.01 21 E2a_E3a KnownJunction 0 84.39 197.53 852.36 611.74 146.86 555.36 120.74 1101.89 2062.91 868.66 2614.93 933.30 945.23 4260.19 2971.39 3394.15 1381.67 1959.54 2718.38 1057.64 6038.86 6479.18 4210.28 22 ER3a ExonRegion 0 191.08 237.55 814.61 602.25 430.22 1228.01 247.10 1052.33 2023.02 841.80 2243.68 1433.75 1069.70 3401.36 2410.79 3232.52 1101.75 1628.98 1244.33 877.30 5472.60 4982.81 4066.15 23 E3a_E4a KnownJunction 0 424.89 435.65 958.98 673.81 984.64 2504.13 451.52 1107.32 2220.03 909.44 2615.93 2142.10 2192.23 2406.33 1791.59 2430.05 1284.90 1551.97 877.77 770.65 6199.48 3115.62 2798.97 24 E4a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4a ExonRegion 0 294.40 363.53 893.00 642.50 922.11 2921.77 531.48 1040.28 2114.58 905.07 2675.50 2018.36 1764.12 2407.64 1522.74 2181.97 1334.66 1558.18 835.32 758.05 6407.76 3284.52 2542.29 26 ER4b ExonRegion 0 258.72 555.84 1048.37 821.99 840.36 4470.78 926.48 1254.54 2658.52 1050.48 3013.54 2169.72 2410.27 3495.54 2359.96 3004.03 1587.39 2009.65 1188.78 974.46 7770.93 4959.75 3205.53 27 E4b_E5a KnownJunction 0 567.73 693.82 1216.49 1016.42 619.02 3009.52 615.50 1381.40 3003.33 1274.22 3415.29 1707.86 1837.70 4355.90 2685.46 2928.04 1916.41 2155.58 1348.74 1184.58 9093.13 4839.41 3418.62 28 ER5a ExonRegion 0 653.92 420.33 1234.72 948.85 662.77 2197.32 444.84 1429.60 2810.35 1176.44 2859.76 2041.05 2043.99 4379.60 2706.88 3799.99 1633.07 2478.60 1406.93 971.78 8305.24 5091.19 4201.46 29 E5a_E6a KnownJunction 0 744.80 434.33 1145.08 792.31 983.36 2833.37 591.65 1382.18 2565.51 1129.89 2519.27 1802.09 1949.39 4700.54 3083.63 2842.16 1490.79 1938.53 1213.31 866.59 8397.09 3958.75 3619.57 30 ER6a ExonRegion 0 613.78 594.57 1474.47 1067.04 933.46 3270.86 667.55 1626.26 3053.71 1252.52 2679.01 1719.70 2307.46 4375.33 2849.59 3943.29 1422.64 2381.31 1493.16 1004.46 7635.53 4964.40 4525.84 31 E6a_E7a KnownJunction 0 644.11 654.23 1327.33 1064.23 1352.46 4195.60 744.10 1633.68 2997.63 1253.73 3552.90 1302.57 1599.73 3988.36 2592.75 3265.04 1740.72 1863.16 1527.86 965.34 9079.11 4641.62 3783.55 32 ER7a ExonRegion 0 748.43 620.56 1315.27 1031.66 1460.44 3859.50 730.69 1641.55 3106.92 1283.29 3817.85 1396.59 1858.73 4507.76 2722.65 3621.67 1818.33 1865.03 1578.43 935.20 9214.71 5190.45 4331.75 33 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E7a_E9a KnownJunction 1 172.92 323.69 456.40 300.59 310.44 1504.25 213.39 450.58 1030.31 244.79 321.45 87.48 75.16 316.15 258.11 293.60 161.10 798.97 656.77 439.94 3295.33 1061.61 1041.43 35 E7a_E10b KnownJunction 0 33.49 61.83 106.15 100.39 37.86 272.00 30.38 99.93 240.51 66.91 44.17 0.00 0.00 5.77 17.68 17.43 23.47 188.32 102.97 83.28 572.99 185.42 182.93 36 E7a_E10c KnownJunction 0 855.78 104.13 430.77 413.27 1001.53 939.91 498.73 764.06 982.19 752.97 2426.40 1142.62 1767.42 4290.97 2972.38 3534.37 1302.76 132.40 186.64 54.90 1654.27 3463.73 2867.26 37 E8a_E10c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER8a ExonRegion 0 0.00 0.00 0.00 0.15 0.00 0.61 0.00 0.58 0.27 0.00 0.21 0.00 0.52 1.08 0.00 0.00 0.37 0.62 0.00 0.00 3.18 0.00 0.00 39 E9a_E10c KnownJunction 0 158.18 316.59 422.99 369.28 233.02 1201.18 191.18 365.64 1069.06 256.45 246.59 174.06 153.24 326.62 337.23 291.46 133.61 1010.18 867.98 464.61 3514.08 1417.07 1206.27 40 ER9a ExonRegion 0 192.84 450.10 748.02 551.06 391.55 1957.89 262.59 714.62 1833.87 441.69 454.02 301.14 207.92 629.62 551.88 461.34 251.60 1620.89 1187.08 684.16 5463.24 1852.02 1752.85 41 ER10a ExonRegion 0 163.93 57.22 50.92 37.67 72.52 139.56 48.82 80.79 88.69 45.70 145.10 78.45 41.80 203.92 110.55 183.13 88.10 76.48 72.75 40.86 144.67 100.24 98.93 42 E10_Ab KnownBoundary 0 112.98 52.16 30.01 33.46 39.81 70.13 22.88 46.21 67.48 26.16 70.23 24.61 6.82 61.16 35.60 118.00 42.54 49.91 16.19 34.07 68.08 65.52 46.61 43 E10_Ac KnownBoundary 0 128.91 33.42 46.57 24.11 45.33 92.50 36.96 60.58 62.56 40.64 76.39 29.86 47.40 105.66 75.78 80.75 56.76 31.42 42.73 17.32 50.04 42.50 66.07 44 ER10b ExonRegion 0 375.33 199.97 438.27 357.76 307.26 923.62 186.24 510.76 947.54 369.11 714.21 341.31 388.49 1089.51 699.69 906.99 357.05 739.10 468.78 296.10 2188.65 1206.01 1140.40 45 ER10c ExonRegion 0 879.92 659.07 1475.13 1210.50 1124.16 3390.27 726.43 1823.11 3255.94 1361.35 3351.51 1913.89 2136.94 4737.58 3169.61 4143.96 1761.49 2442.65 1833.77 947.84 8832.70 5678.32 5041.83 46 E10a_E11a KnownJunction 0 1169.24 738.22 1475.49 1350.21 1525.38 4211.04 1023.38 1879.88 3045.57 1253.27 2998.55 2831.12 2494.32 4508.17 3040.74 3502.76 1620.57 1922.36 1509.50 843.71 8213.18 5452.41 4542.17 47 ER11a ExonRegion 0 1230.56 797.18 1543.92 1381.94 1656.37 4302.72 975.21 1907.49 3232.08 1344.45 3195.08 2667.54 2418.10 4555.54 3343.18 4168.81 1603.72 2409.68 1635.12 968.79 8011.88 5714.55 5082.23 48 E11a_E12a KnownJunction 0 1824.40 1060.21 1783.53 1435.18 2135.57 5257.99 1175.79 2220.30 3544.58 1465.05 3523.95 2152.30 2604.54 5804.96 4726.26 4936.06 2004.86 2409.39 2095.68 1254.89 9456.45 6841.01 6155.36 49 ER12a ExonRegion 0 1096.54 759.16 1577.96 1265.08 1132.36 3517.74 880.03 1717.94 2804.24 1240.52 2654.74 1952.26 1830.26 4288.54 3512.31 3221.10 1480.40 1854.34 1271.58 922.16 7598.97 4953.43 4235.93 50 E12_Ab KnownBoundary 0 955.43 706.52 993.55 767.47 805.43 2928.77 718.22 1131.47 1865.14 846.58 1847.68 2132.95 1210.47 3389.27 3276.60 2466.79 1170.08 1246.83 861.77 786.37 5989.69 4147.71 3273.85 51 ER12b ExonRegion 0 884.37 656.02 1187.23 957.21 737.50 2633.34 575.10 1386.44 2325.34 958.20 2149.32 1763.58 936.54 3202.61 2965.35 2583.06 1117.66 1626.31 951.83 858.44 6579.73 4058.11 3500.66 52 E12_Da KnownBoundary 0 1218.73 763.09 1161.37 937.18 812.82 2602.71 552.87 1331.70 2154.00 801.80 2055.42 1444.07 752.87 3107.08 3133.45 2555.57 947.26 1536.64 998.24 801.65 6010.13 4000.32 3639.11 53 ER12c ExonRegion 0 1069.93 721.37 1282.00 985.66 868.97 2770.77 582.19 1476.29 2458.78 993.53 2105.71 1307.62 914.56 3320.84 3189.65 2655.72 1095.18 1883.66 1111.18 887.92 6396.59 4115.29 3698.58 54 E12b_E13a KnownJunction 0 1511.30 843.73 1479.13 1096.13 1300.09 3505.88 770.11 1628.46 2617.33 1125.49 2110.22 1182.39 1139.70 4019.15 3705.31 2816.36 1185.23 2047.67 1232.41 1022.61 6505.22 4230.26 4013.52 55 ER13a ExonRegion 0 1635.49 926.53 1672.83 1205.21 1489.70 4112.19 1070.44 1799.97 2983.96 1290.41 2805.03 1353.64 1337.94 4311.08 3872.00 3434.40 1385.48 2189.77 1341.60 1006.76 7477.20 4917.38 4526.82 56 E13a_E14b KnownJunction 0 1678.52 941.02 1613.93 1088.84 2088.71 4977.13 1406.23 1660.17 2925.69 1200.06 2631.98 1645.14 1736.74 3934.45 3810.50 2990.50 1376.16 1799.08 1139.61 1006.82 7374.49 3950.05 4237.68 57 ER14a ExonRegion 0 17.30 16.19 23.32 14.31 15.94 55.44 18.27 21.58 30.33 16.33 28.00 15.38 13.49 32.43 27.64 35.72 17.88 33.43 18.97 13.33 63.28 42.60 35.40 58 E14_Ab KnownBoundary 0 24.30 9.34 20.90 14.02 11.97 27.94 20.80 23.37 19.68 13.97 7.90 0.00 18.99 9.77 16.94 23.75 13.46 16.42 4.80 9.08 23.66 8.88 3.76 59 ER14b ExonRegion 0 1711.76 823.78 1712.30 1137.82 1592.70 4244.58 1015.05 1833.13 3024.83 1272.68 2892.10 1171.77 1422.55 3979.40 3642.09 3315.07 1423.55 1868.93 1252.01 911.86 7431.82 4848.77 4510.06 60 E14a_E15a KnownJunction 0 2545.64 1072.97 1961.20 1473.97 1735.74 4799.40 1193.14 2243.42 3494.81 1449.47 3588.33 1233.25 1960.75 5129.87 4839.00 4781.48 1791.58 2353.10 1906.69 1060.13 8466.22 6851.97 6315.93 61 ER15a ExonRegion 0 1547.85 752.37 1753.04 1331.06 1404.66 3814.19 871.85 2097.66 3275.88 1389.51 2926.78 1441.71 1735.08 4513.77 3846.16 4819.63 1549.18 2366.43 2126.28 926.64 7653.10 7113.74 6226.28 62 E15_Da NovelBoundary 0 634.04 213.12 857.63 541.66 281.92 913.28 282.82 1010.22 1403.37 607.62 882.86 308.80 274.82 682.21 536.50 1005.46 525.57 712.63 482.65 259.38 2251.48 1579.58 1382.71 63 E15b_E16a KnownJunction 0 2150.75 851.62 1872.32 1291.04 1635.06 3975.44 1061.89 2367.43 3623.46 1512.11 3402.12 1167.98 1763.52 3367.08 3476.00 3546.33 1845.44 1732.17 1462.63 743.04 7377.02 4375.26 4633.68 64 ER15b ExonRegion 0 1598.82 692.64 1700.08 1203.43 1394.06 3567.47 884.94 2120.81 3406.45 1405.65 3248.43 1242.56 1480.17 3460.35 3176.29 3516.62 1682.80 1776.06 1481.19 726.38 7361.27 4502.07 4570.00 65 E16a_E16c KnownJunction 0 68.98 38.22 22.97 6.16 63.67 179.44 50.70 13.68 24.28 6.96 76.70 129.94 118.01 276.06 295.82 161.07 56.57 19.69 60.80 38.99 282.08 155.41 196.08 66 ER16a ExonRegion 0 1556.61 726.92 1617.59 1127.28 1409.67 3810.02 941.23 2156.39 3361.62 1416.52 3025.47 1159.03 1544.97 3652.71 3396.16 3579.55 1599.42 1631.64 1407.93 767.91 6849.22 4601.63 4602.94 67 ER16b ExonRegion 0 1389.49 729.04 1553.77 1067.14 1407.44 3954.59 968.48 2162.30 3361.36 1431.34 2650.00 1153.80 1435.15 3893.01 3493.11 3615.59 1414.43 1608.47 1399.97 807.44 6287.18 5046.28 4600.25 68 ER16c ExonRegion 0 2692.58 1077.90 1653.31 1193.06 2482.99 4314.21 1364.23 1995.46 2912.75 1278.38 2475.91 1575.19 1311.75 3863.23 4194.23 3148.50 1202.90 1413.10 1305.82 781.75 6113.84 5023.24 4186.83 69 E16_Dc KnownBoundary 0 3306.59 1019.29 2265.21 1429.62 1247.11 2144.39 614.83 2689.69 3765.90 1681.91 2531.27 2486.76 1268.10 4007.14 5426.80 2677.50 1376.44 1380.56 1470.16 964.32 6356.03 4651.79 3905.02 70 E16c_E16b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 71 ER16d ExonRegion 0 1700.71 579.54 1600.88 931.64 1442.89 2188.51 698.76 1728.48 2447.59 1106.95 1969.03 990.98 608.02 2815.99 4349.38 2268.29 961.83 1082.18 1028.96 689.19 5128.16 3691.67 3090.65 72 E16_Ab KnownBoundary 0 1366.46 528.59 1383.51 1001.44 4206.37 4517.63 2710.13 1751.68 2192.74 933.99 1743.02 492.31 580.81 2740.14 3808.28 1791.75 760.54 969.72 782.80 599.16 4424.12 2052.30 2399.30 73 ER16e ExonRegion 1 1418.94 486.87 1191.30 786.86 4444.59 3750.40 2817.22 1540.20 1806.46 781.76 1661.28 319.16 600.53 2650.42 3579.89 1589.05 766.02 762.44 727.37 542.78 4466.34 1927.35 2446.93 74 E16_Dd KnownBoundary 1 725.17 384.47 1019.95 567.39 1105.01 1387.61 958.33 1301.43 1333.26 568.94 1180.93 268.89 326.28 1639.13 2666.92 1119.36 613.28 506.85 435.40 422.05 3875.17 1581.54 1817.04 75 ER16f ExonRegion 0 744.64 254.38 1079.44 582.93 523.92 844.50 432.18 1476.35 1571.66 655.99 1150.87 474.46 470.59 1510.63 2600.61 1211.51 442.79 540.83 363.93 413.56 3389.38 1526.22 1710.86 76 E16_Ac KnownBoundary 0 509.42 70.32 461.75 268.66 170.88 257.98 120.65 697.60 747.42 281.94 299.50 48.92 60.06 361.18 500.90 449.63 105.84 217.75 141.46 189.96 1005.86 508.61 653.88 77 E16_Ad KnownBoundary 0 450.82 70.12 396.50 262.74 97.88 183.19 59.13 559.39 592.36 266.98 346.14 58.37 70.61 237.45 471.23 394.94 123.98 157.56 206.97 178.33 1011.11 904.85 529.93 78 ER16g ExonRegion 1 1080.48 184.04 1004.19 575.82 286.30 539.14 199.26 1434.62 1532.16 621.62 1016.70 218.64 286.09 1477.95 2837.43 1179.93 323.49 449.93 441.17 469.15 2814.14 1844.96 1528.52 79 ER16h ExonRegion 0 1086.59 134.02 743.83 410.22 181.27 437.89 107.69 1056.46 1209.21 480.02 816.36 285.44 286.09 928.60 1454.06 545.83 330.90 276.00 259.86 274.58 2306.24 1491.95 762.78 80 E16_De KnownBoundary 0 2031.99 117.02 603.38 298.66 231.15 310.28 106.52 789.81 932.28 359.76 542.03 224.32 292.19 806.17 933.06 382.04 245.25 176.43 143.35 168.04 1466.84 879.86 489.22 81 ER16i ExonRegion 0 3299.10 116.05 443.23 267.43 386.91 459.88 157.65 467.98 520.18 197.43 425.29 246.50 356.26 535.43 896.68 441.92 177.78 168.31 131.05 128.13 1029.08 559.44 641.41 82 ER16j ExonRegion 0 2233.98 35.59 86.39 59.97 264.90 270.49 104.59 53.58 66.70 13.19 90.85 54.12 82.08 144.55 355.40 117.40 62.72 28.64 36.63 36.17 299.70 50.00 231.99 83 ER16k ExonRegion 0 215.88 14.24 3.68 6.81 26.76 31.17 5.30 19.01 14.82 4.59 25.13 12.99 9.38 19.49 40.62 20.80 23.11 7.39 3.19 8.51 50.69 6.25 46.99 84 IG12_AR1 ActiveIntergenicRegion 0 10.58 0.00 6.13 6.23 2.68 0.00 5.30 3.46 1.24 4.10 0.00 4.33 14.07 8.82 6.63 2.97 3.30 1.85 3.19 3.04 4.41 4.17 22.65 85 IG12_SR1 SilentIntergenicRegion 0 3.20 0.47 3.07 3.89 2.19 4.63 9.37 2.62 2.76 2.00 2.22 2.65 3.40 3.54 6.77 3.71 4.16 2.35 4.71 5.18 1.50 0.89 11.40