Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AP3M1	Gene	0	101.47	239.63	105.12	84.84	162.62	191.42	160.55	140.88	205.25	97.35	207.44	317.36	242.39	209.18	166.70	186.36	216.07	112.07	122.15	155.49	79.23	111.35	70.66
2	355264	Transcript	1	59.90	51.48	13.79	7.25	64.34	107.50	91.14	23.88	51.37	29.40	140.26	9.41	18.67	84.92	39.79	180.05	189.77	70.98	79.09	65.55	57.23	66.57	68.63
3	372745	Transcript	1	55.92	67.38	28.48	21.35	100.27	223.34	152.63	65.26	125.04	66.59	225.94	57.72	60.57	152.12	93.91	166.95	322.99	151.87	102.41	190.58	148.88	28.12	84.82
4	487653	Transcript	0	3.22	2.59	4.33	2.22	2.44	1.45	2.26	5.95	7.74	3.24	7.50	1.01	4.37	7.51	4.82	8.23	10.24	7.39	5.01	14.64	3.44	1.91	1.25
5	425908	Transcript	0	38.59	100.99	46.66	38.50	69.76	75.24	55.42	65.84	95.01	43.17	56.50	41.12	31.19	48.41	37.17	52.39	80.82	50.41	51.03	75.29	37.77	30.65	34.13
6	480373	Transcript	0	5.07	10.48	7.50	4.06	10.27	13.60	13.98	8.59	15.65	6.67	19.99	25.79	19.54	25.75	12.60	18.61	24.25	11.85	10.33	11.38	9.97	8.47	7.40
7	ER1a	ExonRegion	0	4.38	3.30	4.31	0.79	4.74	6.32	5.46	3.36	11.63	4.09	11.18	2.46	0.00	9.97	4.30	12.25	17.32	5.71	9.28	10.94	9.68	4.55	7.33
8	E1_Ab	KnownBoundary	0	0.00	0.00	3.13	1.86	3.99	0.00	0.00	2.22	21.18	7.63	17.37	0.00	0.00	23.96	8.90	38.88	16.08	15.75	20.89	17.58	5.93	14.33	14.85
9	ER1b	ExonRegion	1	74.73	80.77	14.10	10.36	98.28	280.08	207.41	33.90	65.07	39.67	151.97	14.36	18.04	208.77	126.02	230.43	255.57	127.04	125.47	109.56	126.08	87.36	108.86
10	E1a_E2a	KnownJunction	1	125.43	129.12	24.42	21.74	220.46	548.04	373.22	70.48	127.17	65.68	245.11	31.66	12.66	176.64	112.37	244.98	344.55	246.69	182.78	212.97	174.77	42.80	176.45
11	E1a_E3b	KnownJunction	1	115.43	99.65	23.27	13.72	123.94	208.69	176.83	44.40	91.12	54.72	269.33	16.36	37.34	159.87	75.28	347.86	362.22	136.26	148.90	120.16	104.77	128.59	129.92
12	ER1c	ExonRegion	1	155.56	163.70	35.54	25.89	262.22	540.97	394.54	87.29	167.98	94.05	431.04	25.98	28.14	367.05	166.82	487.43	585.91	329.82	283.50	251.06	239.10	138.55	233.46
13	ER1d	ExonRegion	0	6.43	5.19	8.65	4.45	4.88	2.90	4.52	11.89	10.14	3.53	6.21	2.01	8.74	10.19	9.64	12.09	15.80	13.24	10.03	16.69	4.47	0.93	2.50
14	E1b_E2a	NovelJunction	0	0.00	0.00	1.83	0.00	0.00	0.00	4.28	7.48	9.35	1.07	15.21	0.00	0.00	4.59	5.07	11.71	0.00	6.14	0.00	20.96	0.00	3.00	0.00
15	E1b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.35	2.95	8.79	0.00	0.00	4.83	0.00	4.36	4.68	1.53	0.00	12.59	2.41	2.88	0.00
16	I1_SR1	SilentIntronRegion	0	20.34	17.05	11.72	10.54	16.27	3.70	12.89	13.41	13.73	5.77	2.24	11.75	12.37	2.53	10.05	13.14	10.54	7.34	10.94	11.25	1.15	1.21	3.39
17	ER2a	ExonRegion	0	24.47	36.96	21.95	16.65	67.36	102.62	60.64	55.75	96.34	48.95	136.94	50.41	75.23	93.54	57.13	115.49	196.56	131.85	53.57	112.31	96.74	20.55	46.61
18	E2_Da	NovelBoundary	0	3.26	21.31	18.27	27.10	14.18	2.27	16.03	29.04	16.52	15.34	2.11	0.00	6.49	4.77	14.09	4.36	33.47	6.59	12.52	5.69	14.33	0.00	15.28
19	E2a_E3b	KnownJunction	1	17.86	36.05	39.06	25.67	12.99	19.36	24.02	69.54	151.62	85.13	295.76	91.08	93.83	186.18	112.24	140.39	427.86	77.06	70.87	246.46	175.14	21.00	31.41
20	ER3a	ExonRegion	0	13.61	15.69	6.83	4.87	20.64	26.98	28.75	16.05	33.88	17.37	80.08	10.51	17.42	60.56	25.28	59.44	119.30	34.84	40.95	48.94	39.04	19.05	25.59
21	ER3b	ExonRegion	0	35.76	70.80	45.70	40.92	87.75	99.51	97.68	116.37	229.08	120.24	363.31	209.36	192.55	288.05	151.39	292.21	450.78	242.69	171.66	222.31	165.21	81.06	132.64
22	E3_Da	KnownBoundary	1	54.97	98.07	48.82	51.64	146.35	186.54	169.72	137.56	290.56	147.69	507.44	282.39	199.01	289.37	153.78	227.63	647.97	194.54	201.23	231.96	186.94	115.36	106.70
23	ER3c	ExonRegion	0	37.78	139.96	63.02	60.13	137.95	307.64	234.87	135.96	252.99	136.45	425.20	395.46	237.90	370.95	162.37	346.52	438.97	178.54	175.45	252.76	147.26	146.22	110.49
24	E3b_E4a	KnownJunction	0	78.24	170.30	61.38	58.50	187.18	294.09	297.13	140.97	215.51	123.27	351.93	545.28	316.38	323.15	187.65	322.74	332.02	132.69	76.05	198.08	149.19	92.10	84.42
25	ER4a	ExonRegion	0	82.32	177.13	92.29	64.34	186.88	212.60	206.05	141.90	257.96	116.06	346.09	503.00	340.55	413.28	181.46	315.20	398.10	161.81	132.60	214.93	145.56	156.63	90.46
26	E4a_E5a	KnownJunction	0	102.83	210.55	115.52	64.19	185.65	202.21	171.66	150.21	240.42	114.65	320.03	448.20	307.77	286.54	170.84	375.03	317.62	236.99	113.98	209.39	122.69	144.14	102.95
27	ER5a	ExonRegion	0	75.17	176.02	98.40	55.13	150.62	190.97	181.98	141.42	254.30	114.91	408.57	536.54	354.98	451.91	201.07	432.51	408.00	256.68	190.73	222.37	170.12	177.91	115.40
28	E5a_E6b	KnownJunction	0	112.09	208.65	94.79	50.91	276.06	340.83	308.39	171.89	310.50	135.41	390.63	572.59	454.84	550.48	259.84	447.23	514.26	201.46	220.71	231.64	189.16	130.86	174.23
29	ER6a	ExonRegion	0	7.16	16.11	10.37	4.72	16.67	23.70	21.79	12.76	26.41	11.20	34.79	43.96	33.55	47.22	20.31	32.69	44.18	20.18	19.11	18.33	18.48	11.86	11.97
30	ER6b	ExonRegion	0	95.64	204.82	105.01	73.19	208.33	304.26	237.57	151.29	302.17	125.65	440.81	608.32	375.37	449.56	198.58	449.11	414.48	298.07	248.31	212.41	188.27	161.56	123.75
31	E6a_E7a	KnownJunction	0	156.92	350.20	121.20	81.28	262.99	480.12	382.93	145.20	342.94	117.74	605.26	690.83	422.21	554.01	244.02	672.30	513.51	440.61	376.67	274.78	181.87	229.69	147.08
32	ER7a	ExonRegion	0	87.39	205.15	104.23	96.89	176.44	288.39	227.93	169.66	336.93	148.02	476.49	770.32	620.80	547.36	254.10	456.13	455.97	282.43	227.54	262.34	176.72	219.41	151.17
33	E7_Da	KnownBoundary	0	16.52	6.58	2.84	5.83	21.31	2.84	17.97	2.14	4.20	1.58	0.00	18.91	13.64	4.94	15.70	15.64	13.00	1.62	3.86	3.20	0.00	0.00	8.02
34	E7a_E8a	KnownJunction	0	102.98	274.56	148.96	135.01	180.90	277.91	267.41	214.28	385.04	174.04	450.27	687.97	647.68	598.98	370.23	446.63	451.43	215.72	276.15	336.08	147.83	199.38	153.23
35	E7a_E9a	NovelJunction	0	0.00	12.37	0.00	4.26	0.00	0.00	0.00	5.09	0.00	0.00	4.32	0.00	19.97	0.00	0.00	7.69	0.00	2.57	0.00	0.00	0.00	0.00	0.00
36	ER7b	ExonRegion	0	2.97	4.85	4.62	3.40	3.87	3.49	6.17	4.41	4.88	2.13	5.19	7.62	5.53	4.27	4.89	4.54	4.32	3.53	1.55	4.42	1.47	5.08	2.82
37	ER8a	ExonRegion	0	124.82	503.70	122.06	110.02	195.75	241.96	239.98	207.75	334.19	160.00	531.31	751.27	700.35	531.34	274.27	416.35	514.57	238.22	239.07	302.63	167.56	191.17	128.32
38	E8a_E9a	KnownJunction	1	98.83	598.64	98.05	86.20	145.93	149.97	154.75	151.60	248.06	134.36	353.04	781.90	773.81	441.82	265.78	218.23	357.08	110.31	233.79	202.23	160.13	143.53	91.42
39	ER9a	ExonRegion	0	135.84	621.29	151.47	114.13	254.21	261.25	255.91	216.45	302.71	157.62	358.39	782.98	703.54	456.23	310.89	397.59	454.95	186.72	223.26	300.06	185.39	213.34	125.69
40	E9a_E10a	KnownJunction	1	172.48	694.61	200.82	121.36	356.71	306.87	372.51	192.76	283.82	137.83	239.06	719.93	679.83	400.44	278.63	260.62	300.89	97.29	193.32	299.64	131.15	179.23	109.18
41	ER10a	ExonRegion	0	155.45	358.58	138.08	106.05	249.92	305.43	266.82	217.00	293.29	143.79	372.13	578.44	511.72	386.77	296.48	330.44	373.34	151.44	199.62	218.78	121.62	200.09	119.44
42	E10_Da	KnownBoundary	0	102.61	270.48	132.73	126.99	203.74	210.33	244.71	208.25	305.52	144.03	271.44	558.63	276.77	249.57	280.12	166.88	259.09	63.13	113.13	198.91	71.72	154.55	61.63
43	ER10b	ExonRegion	0	202.53	381.00	196.89	162.96	267.77	284.65	247.51	206.41	287.17	137.59	248.57	450.09	279.39	220.63	293.16	192.24	236.91	103.11	154.94	193.03	64.68	162.71	67.54
44	E10_Db	KnownBoundary	1	39.41	87.62	61.20	87.30	112.39	155.59	147.90	142.28	204.16	62.16	32.64	116.74	104.70	41.03	27.44	67.16	44.69	71.51	59.86	105.53	17.85	37.90	33.29
45	ER10c	ExonRegion	0	63.57	186.28	86.49	72.13	118.88	123.50	82.08	115.64	156.14	68.97	32.92	71.73	44.96	36.27	49.06	45.34	42.33	65.98	61.10	101.64	36.51	42.26	42.67
46	IG45	Intergenic	0	0.00	4.28	0.96	1.07	1.41	2.89	10.44	6.77	1.94	0.00	0.00	1.87	0.00	2.71	4.76	1.56	1.74	0.00	3.35	6.71	1.16	9.86	3.09
47	IG45_SR1	SilentIntergenicRegion	0	0.00	4.41	0.99	1.07	1.45	2.98	10.75	6.97	1.97	0.00	0.00	1.93	0.00	2.80	4.88	1.61	1.79	0.00	3.42	6.93	1.20	10.11	3.19