Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRPS16 Gene 0 159.28 166.22 146.11 86.57 168.98 178.73 151.58 158.72 159.05 115.68 230.30 156.34 108.53 310.15 355.29 251.97 244.14 154.05 175.09 155.73 122.77 138.97 109.33 2 372940 Transcript 1 25.41 0.00 16.53 0.00 16.13 5.79 6.58 12.65 2.92 2.47 5.26 17.41 6.82 14.13 66.01 8.12 22.44 2.57 4.05 0.00 3.15 11.08 3.84 3 372945 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 416782 Transcript 0 0.00 0.00 0.04 0.00 0.00 0.04 0.01 0.00 0.01 0.00 0.00 0.00 0.00 0.02 0.03 0.00 0.05 0.02 0.00 0.01 0.00 0.04 0.00 5 473427 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 2.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 479005 Transcript 1 0.78 0.68 11.91 3.60 1.87 0.86 1.63 3.63 3.92 9.72 29.93 3.17 2.35 19.25 20.41 13.23 39.98 6.59 7.11 6.17 22.03 5.42 9.62 7 471251 Transcript 0 1.85 4.97 3.18 1.42 6.08 3.86 3.47 1.80 3.21 0.60 3.38 1.38 0.00 8.48 6.02 9.34 3.47 6.11 1.13 3.72 5.76 2.18 5.16 8 ER1a ExonRegion 0 1.39 3.37 1.81 0.00 4.93 4.46 6.53 0.47 2.95 0.31 10.85 0.00 3.20 9.01 20.84 10.61 3.53 3.74 4.85 2.13 3.86 5.07 8.14 9 E1_Ab KnownBoundary 0 7.56 10.00 4.88 3.53 20.46 17.09 16.91 4.60 2.89 0.00 33.01 0.00 8.28 7.30 55.75 48.88 17.86 24.08 17.98 6.52 5.93 15.00 31.76 10 E1_Ac KnownBoundary 0 3.33 0.00 0.00 2.06 0.00 2.90 10.86 2.26 3.50 0.00 2.53 0.00 0.00 0.00 12.61 16.58 9.26 2.40 0.00 3.26 3.15 0.00 0.00 11 E1_Ad KnownBoundary 0 17.93 11.84 4.32 2.53 51.53 57.41 52.02 5.96 8.68 13.40 43.06 0.00 6.98 18.60 70.59 51.35 98.55 15.71 8.28 8.37 27.55 36.13 20.32 12 ER1b ExonRegion 0 3.44 9.41 4.60 0.00 19.40 23.50 28.63 2.59 7.57 2.15 26.09 0.00 4.69 36.04 69.09 35.85 24.34 7.39 11.55 6.52 8.54 13.80 11.38 13 ER1c ExonRegion 1 39.74 32.99 21.92 6.06 108.81 165.45 114.30 13.44 22.23 16.57 88.91 1.44 2.61 127.22 216.63 83.88 161.38 7.80 21.59 43.50 68.80 69.68 50.58 14 ER1d ExonRegion 1 146.22 109.33 90.45 38.88 217.48 468.57 221.13 52.86 68.42 67.84 214.05 21.18 11.95 263.51 479.99 252.15 392.13 110.13 129.13 101.01 177.86 147.28 114.09 15 E1_Da KnownBoundary 1 70.61 95.05 120.58 50.08 42.02 106.70 90.27 64.12 69.04 62.75 183.15 43.81 31.82 119.02 281.11 260.62 91.26 256.68 171.39 72.87 57.33 46.41 72.39 16 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 2.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER1e ExonRegion 1 33.32 40.77 110.68 37.77 18.17 40.73 34.00 71.40 62.63 57.59 263.40 31.35 34.65 128.57 253.30 193.14 260.66 165.49 138.72 75.67 184.54 44.93 84.17 18 E1b_E3a KnownJunction 0 0.00 0.00 6.83 1.66 0.00 0.00 0.00 0.00 1.42 5.45 14.64 0.00 0.00 4.94 8.90 3.67 12.62 0.00 0.00 0.00 6.30 0.00 4.35 19 E1b_E3b KnownJunction 1 7.11 9.74 120.43 43.02 3.74 25.21 12.32 91.64 81.60 84.83 477.70 37.96 19.48 255.23 349.59 117.06 581.86 90.12 76.90 122.21 365.66 54.99 49.51 20 ER2a ExonRegion 0 3.70 9.93 6.35 2.84 12.15 7.71 6.94 3.60 6.43 1.19 6.75 2.76 0.00 16.95 12.04 18.69 6.94 12.23 2.27 7.43 11.52 4.37 10.32 21 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3a ExonRegion 1 1.55 1.36 16.99 5.54 3.75 1.71 3.27 7.26 6.42 13.99 45.23 6.35 4.69 33.57 31.91 22.79 67.34 13.18 14.23 12.34 37.76 10.83 14.88 23 ER3b ExonRegion 1 67.57 126.98 174.32 89.97 178.82 274.29 160.61 136.61 142.85 128.37 512.59 60.98 38.58 632.04 803.91 408.43 476.10 284.35 257.39 227.43 309.09 191.36 175.23 24 E3a_E4a KnownJunction 0 243.60 286.53 216.43 133.58 166.55 148.78 168.39 206.19 193.26 156.01 617.63 207.37 158.59 650.01 995.24 372.98 454.51 213.40 281.33 358.19 290.79 235.01 107.22 25 E3a_E4b KnownJunction 1 25.41 0.00 16.53 0.00 16.13 5.79 6.58 12.65 2.92 2.47 5.26 17.41 6.82 14.13 66.01 8.12 22.44 2.57 4.05 0.00 3.15 11.08 3.84 26 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 Ix_SR1 SilentIntronRegion 0 8.39 21.76 9.41 13.95 20.14 12.60 34.81 14.97 18.97 11.74 14.81 13.29 11.92 34.83 18.06 17.28 25.30 23.93 8.00 15.18 9.32 6.88 8.15 28 E4_Aa NovelBoundary 0 28.60 40.06 24.22 24.11 24.45 8.18 26.23 28.59 35.04 9.91 27.38 31.21 0.00 46.44 38.45 20.85 11.87 47.09 3.95 11.70 5.25 3.12 7.09 29 ER4a ExonRegion 0 233.53 289.63 243.95 160.20 223.51 213.58 211.14 271.14 262.12 193.08 535.75 279.13 221.21 682.61 729.48 469.80 507.01 286.92 295.11 309.58 248.43 270.91 176.64 30 E4_Da KnownBoundary 0 126.62 112.94 124.01 68.09 135.48 108.12 110.41 168.44 118.92 101.67 136.03 94.08 47.40 99.12 88.88 231.56 133.43 166.81 125.65 144.20 55.23 87.44 100.56 31 E4_Db KnownBoundary 1 74.38 105.77 122.47 49.28 103.65 51.05 81.61 112.91 144.27 90.09 64.60 131.29 39.45 111.43 180.36 289.50 129.78 194.67 254.60 110.13 103.29 143.78 110.72 32 ER4b ExonRegion 0 241.28 257.59 257.33 133.56 239.03 177.27 190.65 308.82 266.37 224.03 273.18 290.07 168.84 446.63 561.88 673.68 330.09 431.76 499.04 296.45 193.93 293.08 282.90 33 ER4c ExonRegion 0 188.34 193.34 156.01 100.80 184.82 197.64 170.55 177.27 184.52 130.45 206.18 184.22 134.74 293.78 306.57 276.48 232.45 154.67 202.55 161.12 102.60 146.00 122.65 34 E4_Ab KnownBoundary 1 303.68 213.38 201.00 130.72 315.96 177.11 226.25 262.91 233.74 133.77 150.88 293.65 147.88 210.73 390.01 200.63 106.31 123.41 114.36 144.71 22.18 166.31 48.91 35 ER4d ExonRegion 1 207.34 186.09 186.67 89.15 219.05 139.03 171.67 226.00 192.66 133.12 152.84 233.70 125.73 250.80 318.08 167.74 161.56 134.63 132.36 158.62 86.56 139.23 79.00 36 E4_Dc KnownBoundary 1 279.01 288.24 160.40 61.03 262.39 133.33 179.70 145.69 136.51 103.61 103.97 202.42 138.63 268.06 296.93 113.47 130.53 94.10 99.49 160.18 90.94 70.54 60.44 37 ER4e ExonRegion 0 220.16 152.73 65.24 31.53 159.00 91.34 107.71 74.03 100.19 62.65 84.32 113.61 56.68 116.34 128.51 68.52 70.71 53.06 47.24 84.86 25.80 53.23 30.20 38 E4_Dd NovelBoundary 1 63.64 113.53 22.32 25.14 53.82 89.95 97.07 76.27 135.88 63.34 44.27 93.93 12.99 36.08 46.73 16.83 17.20 45.72 49.22 59.06 5.75 34.05 15.19 39 E5_Aa NovelBoundary 0 66.83 125.57 80.42 49.21 70.80 80.35 74.33 87.24 145.72 135.28 37.33 26.41 0.00 60.16 18.67 40.76 29.08 82.70 12.14 95.11 35.95 10.59 35.08 40 ER5a ExonRegion 0 0.00 0.00 0.09 0.00 0.00 0.07 0.03 0.00 0.03 0.00 0.00 0.00 0.00 0.05 0.06 0.00 0.10 0.04 0.00 0.02 0.00 0.09 0.00