Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CHCHD1 Gene 0 72.34 68.39 108.70 54.06 75.92 72.14 59.42 77.69 71.27 53.78 132.94 63.61 29.87 119.62 209.75 116.52 101.25 41.82 81.49 72.14 51.06 68.07 53.22 2 372837 Transcript 0 49.98 44.59 28.44 14.01 38.76 52.60 44.76 16.19 13.87 9.33 32.76 11.26 6.08 27.29 91.80 63.56 29.68 7.22 46.18 29.49 17.87 18.84 29.25 3 372833 Transcript 0 20.45 26.30 134.48 63.69 126.17 82.31 45.47 109.15 91.13 70.20 146.87 80.48 22.73 107.81 211.01 167.69 94.73 107.44 79.20 77.96 59.07 69.46 64.58 4 IG39 Intergenic 0 44.98 28.60 31.99 28.56 43.55 35.99 31.61 37.56 49.67 22.68 54.76 29.98 7.64 26.97 23.94 16.94 21.44 11.12 12.11 31.02 16.06 48.95 28.41 5 IG39_AR2 ActiveIntergenicRegion 0 88.70 52.76 60.00 52.03 84.72 68.74 59.40 71.15 99.60 44.38 116.82 61.31 15.53 49.81 42.13 26.39 38.42 18.78 20.22 57.90 33.11 105.47 58.53 6 IG39_AR3 ActiveIntergenicRegion 0 10.49 11.22 11.53 12.11 12.38 11.20 10.96 12.84 10.41 6.08 3.27 4.19 1.38 10.61 10.90 12.43 9.70 6.38 7.35 11.36 2.35 1.85 4.18 7 ER1a ExonRegion 1 58.02 58.85 25.66 4.01 34.78 72.81 65.19 5.80 4.58 6.27 47.75 0.00 0.00 28.66 153.08 104.37 48.54 3.48 83.38 43.30 31.37 30.27 51.30 8 ER1b ExonRegion 1 153.87 169.19 101.08 25.85 87.28 156.87 162.67 38.94 34.20 44.00 182.15 8.21 6.07 143.71 397.07 241.51 185.97 19.67 167.86 104.25 122.87 95.46 116.62 9 E1a_E2a KnownJunction 1 92.09 37.16 113.24 45.68 20.46 33.16 16.08 92.09 79.54 77.04 429.32 12.30 6.49 118.49 235.74 86.90 289.01 23.05 24.00 97.47 191.63 43.41 4.35 10 E2_Aa NovelBoundary 0 16.30 35.72 13.99 0.00 10.95 2.33 13.43 15.65 7.73 7.20 13.21 0.00 0.00 19.95 29.05 11.28 17.77 7.83 7.72 9.27 12.48 11.27 6.49 11 ER2a ExonRegion 1 75.39 58.17 281.92 117.47 105.25 68.30 38.61 172.13 162.94 126.49 427.01 66.18 37.05 426.50 782.19 588.81 400.46 237.41 397.15 242.98 210.67 208.68 272.47 12 E2_Da KnownBoundary 0 17.86 22.56 15.91 16.18 3.31 5.39 14.53 10.35 13.40 7.25 2.53 0.00 0.00 12.01 13.35 7.95 0.00 13.76 7.72 17.64 2.29 9.37 0.00 13 E2a_E2b KnownJunction 0 19.56 30.46 222.58 97.32 223.34 146.00 76.71 182.98 140.88 114.16 279.70 132.49 37.17 203.49 401.01 323.25 178.03 203.58 135.25 132.12 112.74 126.32 114.56 14 ER2b ExonRegion 0 41.95 30.32 31.22 24.01 42.74 32.39 24.33 26.58 23.16 12.39 17.76 22.52 12.17 25.92 30.52 22.75 10.81 10.95 8.98 15.68 4.37 7.41 7.20 15 E2_Ab KnownBoundary 0 42.90 25.78 33.53 20.01 83.96 55.31 47.03 27.27 26.74 12.68 16.00 32.41 20.94 20.90 27.44 27.09 11.31 10.57 16.28 16.43 0.00 15.31 14.26 16 ER2c ExonRegion 0 147.65 151.79 271.66 131.19 176.41 170.20 137.71 210.71 186.17 146.11 355.43 212.41 97.78 292.23 458.42 169.34 223.32 70.43 125.11 156.70 98.08 183.13 71.03 17 E2_Db KnownBoundary 0 31.26 41.70 88.70 61.10 60.95 36.74 30.52 74.34 57.99 54.34 9.90 24.61 26.30 12.42 47.47 11.11 16.83 13.02 42.26 59.38 5.68 17.82 15.71 18 ER2d ExonRegion 1 21.34 22.14 46.39 30.05 29.00 18.63 14.22 35.31 41.38 26.24 14.04 28.47 8.28 12.14 21.01 12.13 11.44 11.30 23.15 23.81 5.39 12.59 14.61