Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZMYND17 Gene 0 37.41 50.38 17.54 26.66 29.54 37.59 24.43 24.04 37.88 11.27 9.45 14.47 16.45 18.89 27.18 26.42 17.94 42.14 15.64 29.18 25.11 18.13 20.29 2 299432 Transcript 0 0.00 2.03 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 3.19 1.10 0.00 0.00 3 487126 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 372912 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 IG33 Intergenic 0 7.40 17.60 5.28 15.42 13.74 15.43 12.25 7.08 16.68 5.03 4.33 12.66 18.61 5.29 6.14 11.10 9.71 13.63 6.37 19.08 8.18 10.20 8.21 6 IG33_SR1 SilentIntergenicRegion 0 7.43 17.75 5.28 15.64 13.86 15.66 12.35 7.06 16.92 5.11 4.37 12.72 18.94 5.24 6.12 10.73 9.88 13.48 6.34 19.14 7.90 10.26 8.17 7 IG33_AR1 ActiveIntergenicRegion 0 6.35 11.88 5.66 6.84 8.94 6.12 8.69 8.26 7.26 1.90 3.02 10.48 5.63 7.54 7.25 26.87 3.10 20.36 7.90 17.19 20.05 8.00 10.28 8 ER1a ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 3.19 1.10 0.00 0.00 9 ER1b ExonRegion 0 2.52 3.59 3.68 1.10 8.08 5.42 4.68 3.13 6.54 0.73 5.51 5.62 3.49 3.94 1.36 6.20 6.53 6.57 5.29 14.49 4.74 2.88 1.50 10 E1_Da NovelBoundary 0 0.00 6.45 11.38 11.49 4.16 14.37 14.57 11.42 12.93 2.53 0.00 6.00 13.15 0.00 0.00 4.36 3.83 5.97 4.80 5.88 11.18 3.12 0.00 11 E1a_E2a KnownJunction 0 10.59 5.46 6.74 8.49 16.21 18.40 8.66 16.59 17.27 5.88 9.79 6.30 15.10 9.71 4.45 20.17 14.31 21.89 12.89 17.90 8.28 8.63 4.35 12 I1_SR1 SilentIntronRegion 0 1.94 7.89 3.24 8.82 6.78 7.37 9.01 3.99 11.46 3.25 1.17 5.85 6.99 1.42 4.43 4.72 5.14 3.61 0.00 15.23 3.63 8.02 1.67 13 I1_AR1 ActiveIntronRegion 0 2.85 7.56 5.13 7.57 8.82 10.57 8.29 4.18 7.44 2.27 2.84 5.15 9.27 4.07 4.00 7.81 9.70 5.83 4.20 12.54 11.37 6.25 4.80 14 I1_SR2 SilentIntronRegion 0 4.91 9.95 6.72 8.62 8.83 6.65 10.49 5.38 8.62 1.83 2.02 7.03 11.09 2.56 5.09 4.83 5.47 4.63 2.82 13.17 3.76 7.88 3.53 15 I1_AR2 ActiveIntronRegion 0 11.19 16.59 4.06 5.52 11.47 4.17 9.20 8.98 6.58 0.52 1.00 3.60 11.09 4.09 3.96 8.65 12.26 8.35 0.66 9.39 13.39 6.09 5.15 16 E2_Aa NovelBoundary 0 3.70 12.43 10.50 6.09 3.99 26.52 10.82 4.60 16.15 6.45 0.00 0.00 15.10 9.65 0.00 16.41 0.00 12.52 0.00 3.00 3.15 6.25 4.10 17 E2_Ab NovelBoundary 0 12.59 28.09 16.03 12.29 19.52 22.77 3.58 20.09 24.13 4.67 0.00 6.30 8.12 5.06 9.15 32.47 4.02 37.31 19.67 40.14 34.35 7.23 7.34 18 ER2a ExonRegion 0 8.47 19.79 7.27 3.00 22.48 22.37 8.39 6.91 20.34 4.74 6.70 9.81 9.38 10.07 9.28 24.17 13.86 27.35 15.29 28.09 20.86 6.25 4.70 19 ER2b ExonRegion 0 13.51 32.77 13.97 13.98 30.59 43.24 18.92 16.49 28.62 12.39 7.45 13.28 15.73 10.98 15.47 28.39 18.24 62.02 20.08 30.25 34.53 12.67 20.48 20 E2a_E3a KnownJunction 0 13.34 34.73 16.06 15.95 30.81 33.39 6.40 14.09 23.64 18.99 9.48 18.91 6.82 11.71 19.53 26.32 21.22 40.58 4.80 9.40 39.29 14.27 19.46 21 ER3a ExonRegion 0 14.03 17.95 11.80 18.10 19.76 40.16 12.19 16.66 35.18 13.42 6.75 9.60 7.37 10.83 10.81 21.91 17.27 43.16 10.17 17.08 28.20 10.44 14.49 22 E3_Da NovelBoundary 0 0.00 2.83 2.75 3.43 19.52 2.90 2.25 4.64 2.52 3.52 0.00 0.00 6.82 4.77 4.70 11.79 3.74 14.92 0.00 0.00 8.83 3.12 0.00 23 E3a_E4a KnownJunction 0 10.82 2.96 11.21 15.12 7.05 46.17 18.86 14.54 29.63 10.80 2.05 0.00 6.82 11.95 6.30 11.02 4.21 23.38 7.15 19.37 26.07 5.45 7.17 24 I3 Intron 0 13.36 10.55 9.47 7.20 7.63 8.88 8.81 7.79 7.80 3.10 2.51 3.52 7.81 2.07 4.28 7.19 5.42 10.49 9.64 8.65 2.29 3.96 4.83 25 I3_SR1 SilentIntronRegion 0 13.45 10.62 9.53 7.25 7.68 8.94 8.87 7.84 7.85 3.12 2.52 3.55 7.87 2.09 4.31 7.24 5.46 10.56 9.70 8.71 2.30 3.99 4.86 26 E4_Aa NovelBoundary 0 6.96 15.59 9.64 0.00 7.13 11.07 17.62 10.43 7.12 1.53 2.47 0.00 0.00 7.42 6.30 4.36 4.77 16.95 0.00 6.07 8.34 0.00 0.00 27 ER4a ExonRegion 0 7.18 8.36 5.49 12.35 17.38 19.42 8.41 14.82 33.22 11.85 6.05 5.51 5.44 9.63 9.91 22.37 7.84 25.94 5.99 17.89 15.20 6.08 9.42 28 E4_Da NovelBoundary 0 6.67 14.67 23.36 12.92 11.80 30.61 6.36 11.13 16.46 9.51 2.21 0.00 0.00 2.41 8.90 4.36 9.26 24.62 0.00 11.19 5.87 11.76 4.35 29 E4a_E5a KnownJunction 0 5.63 5.79 2.72 6.76 11.54 26.23 3.97 1.89 18.52 6.23 2.21 6.30 0.00 4.53 4.45 0.00 0.00 8.33 8.38 9.27 5.87 2.63 4.35 30 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 I4 Intron 0 7.07 12.68 8.95 5.43 18.47 24.50 13.27 7.46 13.94 4.19 6.89 3.97 4.67 8.34 7.22 15.87 5.15 29.05 4.26 9.48 12.76 6.96 13.07 32 I4_AR1 ActiveIntronRegion 0 8.15 10.23 8.63 4.08 25.06 25.30 10.10 8.72 14.97 4.28 7.91 1.96 3.63 10.38 7.05 17.18 6.73 31.57 5.70 10.82 14.63 7.32 19.41 33 I4_SR1 SilentIntronRegion 0 5.82 16.10 9.54 7.28 10.30 23.97 17.64 5.97 12.89 4.14 5.70 6.65 6.06 5.87 7.59 14.50 3.20 26.37 2.48 7.93 10.57 6.63 5.10 34 E5_Aa NovelBoundary 0 3.11 19.34 11.71 8.82 0.00 20.84 14.66 6.16 21.21 5.69 9.79 6.30 0.00 2.47 4.45 20.76 11.87 33.41 4.42 21.35 17.24 0.00 40.12 35 ER5a ExonRegion 0 16.17 16.49 14.63 16.35 13.30 32.67 16.41 19.71 40.09 8.41 10.48 5.82 5.09 15.31 15.77 25.19 19.39 54.35 13.78 27.77 30.19 13.51 18.13 36 E5_Ab KnownBoundary 0 37.34 17.04 9.67 23.01 16.38 8.29 12.41 15.98 38.71 8.27 2.47 0.00 6.82 11.77 14.46 24.87 25.62 42.57 14.02 26.91 17.73 11.70 22.28 37 ER5b ExonRegion 0 18.66 18.30 8.50 13.53 19.62 38.97 14.89 18.33 32.73 12.81 7.32 7.76 6.53 15.30 16.72 19.77 22.03 59.59 11.40 23.18 20.42 15.87 21.99 38 E5_Da NovelBoundary 0 3.04 6.18 2.48 13.09 0.00 2.38 1.72 8.13 10.50 4.51 2.32 0.00 0.00 2.18 0.00 0.00 0.00 4.23 0.00 14.64 3.15 0.00 11.27 39 E5a_E6a KnownJunction 0 29.41 18.29 1.57 9.76 28.52 39.75 18.46 23.49 30.64 9.51 7.00 6.60 0.00 21.60 15.95 22.99 12.16 61.23 8.47 9.59 14.27 15.25 18.87 40 E6_Aa NovelBoundary 0 16.37 54.53 34.65 12.65 8.32 25.89 8.04 28.67 36.17 20.82 2.53 7.65 0.00 2.47 19.90 0.00 8.98 33.16 13.37 22.95 6.30 5.45 10.59 41 ER6a ExonRegion 0 20.11 33.25 5.62 12.48 17.25 34.32 13.20 14.03 17.12 8.10 9.29 2.35 2.10 23.15 26.30 14.64 14.05 45.05 14.33 21.10 25.20 6.78 18.46 42 E6_Da NovelBoundary 0 52.68 20.46 22.18 29.23 55.09 18.28 32.50 20.00 24.39 13.32 10.42 0.00 7.14 2.47 0.00 7.69 9.16 22.26 8.94 39.44 22.80 17.21 15.54 43 E6a_E7a KnownJunction 0 0.00 21.44 3.08 13.35 10.70 11.30 1.77 6.37 15.68 5.94 12.63 0.00 0.00 13.71 22.25 8.72 0.00 16.33 4.33 15.08 11.86 0.00 8.37 44 I6 Intron 0 23.91 33.51 12.89 19.12 35.27 39.43 20.99 23.44 24.84 5.63 6.07 8.43 9.96 10.33 11.06 11.66 11.91 29.42 4.00 16.36 13.13 11.77 11.98 45 I6_AR1 ActiveIntronRegion 0 24.06 33.69 12.97 19.24 35.49 39.67 21.11 23.59 24.99 5.67 6.10 8.48 10.02 10.39 11.13 11.73 11.99 29.60 4.02 16.45 13.22 11.84 12.06 46 E7_Aa NovelBoundary 0 17.41 17.10 13.78 45.18 12.05 10.62 14.00 27.68 45.51 5.16 2.37 0.00 19.48 29.43 28.93 32.21 13.56 26.03 22.40 20.71 19.21 14.45 0.00 47 ER7a ExonRegion 0 35.49 52.95 17.00 34.19 37.63 54.32 29.64 31.57 50.09 14.18 11.99 18.70 13.70 21.05 29.32 25.74 16.90 37.54 13.48 30.72 25.82 25.60 21.67 48 E7_Da KnownBoundary 0 23.04 57.82 20.16 47.88 59.17 37.54 30.65 50.64 27.11 18.43 12.95 41.26 6.49 33.61 24.97 35.03 13.00 34.16 13.46 22.05 13.28 42.37 12.46 49 ER7b ExonRegion 0 71.48 93.65 26.76 41.42 42.16 36.31 36.67 31.42 40.68 11.59 10.07 22.70 30.89 25.88 44.34 31.83 19.69 33.99 20.15 35.64 22.64 24.78 24.75 50 IG32 Intergenic 0 14.43 25.88 5.64 14.03 19.95 14.00 15.77 15.46 18.91 6.69 2.11 7.96 10.35 6.16 10.01 13.24 9.60 15.55 9.85 20.50 6.81 7.39 10.14 51 IG32_SR1 SilentIntergenicRegion 0 14.51 26.01 5.67 14.10 20.02 14.08 15.85 15.54 19.01 6.72 2.12 8.01 10.41 6.19 10.05 13.30 9.65 15.62 9.90 20.61 6.84 7.43 10.19