Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	DNAJB12	Gene	0	18.51	16.37	24.60	15.84	13.77	24.91	14.77	22.55	24.49	15.29	44.34	15.38	17.42	45.23	59.89	47.83	44.98	41.78	26.16	28.76	41.04	34.36	33.42
2	444643	Transcript	0	1.37	0.00	4.96	2.83	3.62	0.69	0.82	1.18	3.19	4.21	1.20	0.00	0.00	0.00	0.00	0.00	0.00	5.72	0.00	2.72	0.00	1.14	0.47
3	394903	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	338820	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	461919	Transcript	0	8.95	7.09	12.64	14.50	7.22	7.08	6.44	16.23	18.14	9.58	6.45	3.77	10.18	10.87	9.91	11.27	5.94	17.04	21.35	20.21	13.98	9.81	8.36
6	463786	Transcript	0	7.76	10.17	23.28	16.81	27.65	61.74	22.07	17.86	23.06	19.12	62.50	10.10	14.07	47.10	44.49	53.50	62.72	49.27	29.73	34.04	56.56	38.89	34.26
7	473051	Transcript	0	6.90	6.18	16.96	5.32	10.89	10.27	12.31	13.35	7.39	7.77	7.33	4.74	1.46	16.53	16.18	14.28	18.89	27.50	6.95	20.45	10.53	10.55	11.30
8	IG19_AR1	ActiveIntergenicRegion	0	3.51	5.96	6.05	2.07	5.46	4.44	5.57	9.86	14.32	2.61	0.00	0.45	0.00	0.51	0.89	1.14	1.68	5.74	2.44	6.24	1.69	1.06	3.37
9	ER1a	ExonRegion	0	1.37	0.00	4.96	2.83	3.62	0.69	0.82	1.18	3.19	4.21	1.20	0.00	0.00	0.00	0.00	0.00	0.00	5.72	0.00	2.72	0.00	1.14	0.47
10	E1_Ab	KnownBoundary	0	5.70	2.63	7.04	7.09	3.31	5.17	0.00	2.18	4.22	6.42	2.11	0.00	0.00	0.00	4.94	0.00	7.48	8.83	0.00	8.25	0.00	4.78	7.00
11	ER1b	ExonRegion	0	34.97	24.74	13.53	8.85	11.31	40.40	15.34	22.69	20.92	10.35	50.87	5.24	3.09	39.05	47.60	67.32	68.38	40.58	54.81	30.75	40.56	37.81	62.61
12	E1a_E3a	KnownJunction	1	3.56	5.79	17.98	14.52	15.87	19.70	8.44	48.80	48.93	40.43	146.72	25.51	6.33	105.01	106.81	38.79	149.79	45.27	66.92	59.89	124.54	42.56	67.10
13	I1_SR1	SilentIntronRegion	0	0.09	0.00	0.00	0.36	0.00	0.00	0.68	0.31	2.06	0.00	0.00	1.25	0.00	0.97	4.06	2.84	7.85	2.71	13.24	1.04	0.98	1.16	8.29
14	E2_Aa	NovelBoundary	0	0.00	3.16	8.01	4.03	0.00	14.08	1.94	17.09	14.70	10.10	2.05	0.00	13.80	0.00	14.46	7.52	8.88	6.92	9.04	15.21	0.00	2.57	7.00
15	ER2a	ExonRegion	0	4.26	3.19	3.59	2.49	3.15	3.24	5.07	10.75	8.22	3.44	4.46	5.00	3.60	5.13	7.97	7.59	8.92	10.47	8.60	13.79	8.22	3.17	10.67
16	E2_Da	NovelBoundary	0	0.00	5.26	10.20	10.09	0.00	8.29	11.53	19.22	7.26	4.35	14.58	6.30	0.00	4.89	4.45	8.12	9.16	6.09	3.67	19.24	11.12	2.33	4.35
17	E2a_E3a	NovelJunction	0	0.00	0.00	3.43	0.00	4.33	5.79	2.12	2.05	5.09	4.70	0.00	0.00	0.00	12.36	0.00	0.00	0.00	0.00	8.94	0.00	0.00	2.33	0.00
18	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	0	7.43	5.21	9.47	5.27	6.00	3.68	7.41	12.60	11.64	5.87	6.21	9.24	10.66	5.05	11.71	11.62	10.53	11.98	10.06	12.61	6.11	4.07	11.25
20	I2_SR1	SilentIntronRegion	0	10.13	6.65	11.16	5.97	8.18	4.66	9.61	15.46	13.90	6.00	7.67	14.44	13.77	5.27	10.75	12.45	14.04	9.68	9.57	15.12	6.29	3.15	10.39
21	I2_AR1	ActiveIntronRegion	0	3.98	4.02	10.80	4.64	5.65	0.65	7.17	12.88	10.99	7.10	5.76	9.81	9.94	3.70	14.27	13.23	12.03	12.71	7.63	15.50	6.49	4.08	9.72
22	I2_SR2	SilentIntronRegion	0	6.63	4.68	8.44	5.02	4.97	3.67	6.37	11.15	10.64	5.62	5.56	6.60	9.24	5.15	11.80	10.97	8.58	13.02	10.68	10.94	5.96	4.53	11.91
23	E3_Aa	NovelBoundary	0	3.19	3.16	10.41	7.16	4.33	16.41	2.03	11.25	16.72	5.26	2.47	0.00	0.00	2.47	8.90	0.00	8.70	16.25	8.19	18.15	5.62	8.94	4.35
24	ER3a	ExonRegion	0	16.96	25.31	49.50	38.11	30.44	57.99	22.63	65.98	79.38	50.23	160.63	31.40	47.11	153.71	228.03	184.76	192.38	121.73	110.79	113.47	139.58	141.16	136.57
25	E3_Da	NovelBoundary	0	0.00	0.00	4.97	7.03	0.00	5.68	5.92	3.90	4.57	1.67	0.00	0.00	0.00	0.00	8.90	7.01	3.83	4.19	3.48	2.75	0.00	3.00	12.98
26	E3a_E4b	KnownJunction	0	40.82	27.43	78.59	55.07	117.23	171.55	71.19	58.49	79.86	61.14	175.04	34.06	28.89	146.57	135.73	170.38	185.41	129.62	102.78	108.91	153.39	115.67	88.95
27	ER4a	ExonRegion	0	7.76	10.17	23.28	16.81	27.65	61.74	22.07	17.86	23.06	19.12	62.50	10.10	14.07	47.10	44.49	53.50	62.72	49.27	29.73	34.04	56.56	38.89	34.26
28	ER4b	ExonRegion	0	78.56	103.70	82.62	55.93	52.96	124.65	62.55	83.29	103.07	73.59	240.49	91.46	93.28	196.89	243.37	191.06	223.64	193.77	91.30	124.43	187.57	139.06	124.39
29	E4a_E5a	KnownJunction	0	178.62	95.05	123.09	97.62	32.00	79.73	36.74	91.96	101.27	83.59	241.75	110.59	168.50	237.21	311.14	349.82	217.02	308.79	163.77	163.56	216.59	215.17	157.41
30	ER5a	ExonRegion	0	53.32	44.43	99.41	65.66	40.44	73.38	39.08	69.09	93.78	64.79	193.65	73.97	92.64	200.10	222.71	207.79	174.42	173.55	97.44	104.67	172.81	142.18	110.71
31	E5a_E6a	KnownJunction	0	76.53	67.82	120.81	64.49	74.11	107.55	56.26	80.34	102.23	65.54	163.67	64.67	59.74	150.27	229.68	167.48	186.26	127.97	84.71	96.64	179.46	89.09	124.72
32	ER6a	ExonRegion	0	63.55	50.89	80.68	45.67	44.32	60.10	49.23	70.33	76.81	54.91	149.39	56.23	72.64	207.16	230.69	137.83	158.24	93.57	56.74	107.26	138.03	116.73	80.10
33	E6_Da	NovelBoundary	0	0.00	6.12	19.75	9.82	3.99	10.22	4.11	13.51	9.90	8.76	2.68	5.40	0.00	11.95	26.58	7.35	8.23	35.44	8.56	36.11	10.81	13.78	3.67
34	E6a_E7a	KnownJunction	0	90.83	61.37	79.42	57.14	30.39	33.28	33.61	79.52	73.03	74.33	146.77	52.37	31.98	230.39	237.35	160.81	199.44	140.24	71.91	74.91	129.42	88.05	114.30
35	I6	Intron	0	7.86	15.20	7.67	7.34	8.50	6.45	11.45	10.32	6.56	5.09	4.06	6.47	1.89	8.85	10.48	10.31	7.10	8.93	8.87	13.41	5.38	9.06	11.48
36	I6_SR1	SilentIntronRegion	0	4.57	10.65	3.58	3.07	5.23	5.84	8.14	5.25	4.04	4.27	3.61	2.50	1.43	8.54	9.37	8.16	3.74	6.85	7.13	10.28	3.11	6.37	11.59
37	I6_AR1	ActiveIntronRegion	0	14.26	24.08	15.63	15.66	14.87	7.67	17.92	20.19	11.49	6.72	4.95	14.20	2.77	9.48	12.69	14.51	13.63	13.01	12.28	19.53	9.81	14.31	11.32
38	E7_Aa	NovelBoundary	0	34.30	44.99	18.86	16.15	24.70	4.88	10.38	32.78	16.87	14.16	7.58	6.30	0.00	9.83	22.99	8.20	16.46	28.73	29.84	48.39	24.53	17.64	28.34
39	ER7a	ExonRegion	0	71.17	71.69	94.50	63.42	53.30	90.57	69.86	73.21	89.89	62.26	182.29	49.55	43.96	184.16	254.44	202.00	157.36	167.39	84.88	109.63	152.14	117.59	120.56
40	E7_Da	NovelBoundary	0	7.11	20.13	18.15	14.68	37.86	16.92	49.06	17.79	21.06	2.95	0.00	5.70	8.28	7.95	32.26	11.36	8.32	39.17	12.80	11.76	24.22	7.84	11.78
41	E7a_E8b	KnownJunction	0	71.72	39.20	75.22	60.30	28.18	52.19	35.02	66.87	98.93	60.12	75.07	67.97	38.15	124.20	238.33	105.87	134.64	98.24	27.77	62.00	90.50	88.97	120.79
42	I7	Intron	0	8.95	8.33	20.67	7.27	6.61	8.59	13.69	14.07	14.73	8.45	8.05	4.47	3.84	12.88	15.21	20.11	18.47	27.78	17.20	20.76	12.61	18.43	17.57
43	I7_AR1	ActiveIntronRegion	0	8.97	8.36	20.72	7.28	6.63	8.61	13.73	14.11	14.76	8.47	8.07	4.48	3.85	12.92	15.25	20.16	18.51	27.86	17.24	20.81	12.64	18.48	17.62
44	E8_Aa	NovelBoundary	0	18.82	8.75	19.51	11.09	8.57	8.29	15.41	9.08	11.72	5.24	7.95	5.40	0.00	9.54	19.66	22.39	16.18	37.06	9.22	19.30	11.68	24.13	12.21
45	ER8a	ExonRegion	0	6.90	6.18	16.96	5.32	10.89	10.27	12.31	13.35	7.39	7.77	7.33	4.74	1.46	16.53	16.18	14.28	18.89	27.50	6.95	20.45	10.53	10.55	11.30
46	E8_Ab	KnownBoundary	0	13.41	2.70	25.16	10.55	4.07	9.99	20.01	14.54	15.36	8.84	2.53	0.00	0.00	14.89	14.46	11.19	28.42	28.81	13.08	12.21	14.27	0.00	8.71
47	ER8b	ExonRegion	0	63.61	69.13	117.26	80.62	83.55	118.39	62.32	106.93	121.90	71.91	173.23	74.31	73.84	204.78	268.64	178.43	180.23	146.53	79.32	114.06	166.43	135.30	112.99
48	E8a_E9a	KnownJunction	0	72.46	65.19	134.06	91.66	107.47	102.61	85.01	120.80	152.23	66.27	208.84	42.91	47.72	188.53	381.24	195.76	191.30	145.54	74.26	109.04	192.87	121.67	147.59
49	I8	Intron	0	2.92	1.58	7.55	5.77	1.84	2.37	4.22	6.43	1.74	3.98	4.83	2.39	2.66	4.19	5.18	8.96	4.83	11.63	8.78	7.33	5.31	8.62	9.61
50	I8_SR1	SilentIntronRegion	0	2.98	1.63	7.79	5.95	1.91	2.45	4.33	6.61	1.81	4.08	4.88	2.48	2.74	4.26	5.37	9.29	5.01	12.02	9.03	7.54	5.51	8.84	9.93
51	ER9a	ExonRegion	0	70.60	61.73	132.44	99.70	66.24	91.47	58.77	98.57	122.91	67.30	198.85	89.59	115.58	193.47	263.07	213.84	139.24	176.99	119.42	84.67	188.08	151.48	133.53
52	E9_Da	KnownBoundary	0	80.01	29.73	100.03	53.34	27.16	98.13	46.55	72.45	76.01	57.89	183.89	30.01	73.70	116.78	243.53	167.48	183.73	136.38	50.92	70.63	150.00	159.64	108.84
53	E9a_E9b	KnownJunction	0	22.60	18.09	34.33	41.02	18.51	18.00	14.26	37.95	46.21	25.30	14.90	6.30	26.95	27.49	21.76	26.23	8.88	40.67	55.44	46.85	33.73	26.27	14.43
54	ER9b	ExonRegion	0	45.27	23.39	97.26	38.36	19.62	47.17	38.93	51.02	54.02	39.70	157.82	42.81	55.85	119.25	187.61	119.71	141.51	93.59	51.26	51.42	119.29	115.75	75.92
55	E9_Db	KnownBoundary	1	16.00	6.51	58.66	17.85	10.10	26.23	19.65	43.87	27.95	13.91	41.12	30.16	13.15	63.92	66.88	72.20	16.64	98.16	42.45	20.20	45.04	64.72	49.68
56	E9b_E9b	KnownJunction	0	28.15	17.17	51.62	20.88	19.78	20.16	20.93	33.15	30.96	19.66	110.03	45.46	67.69	70.22	93.21	69.73	84.81	35.15	9.41	25.50	40.83	35.33	23.30
57	ER9c	ExonRegion	0	20.66	11.70	40.38	17.32	11.84	27.20	13.98	21.29	22.54	14.47	48.17	15.69	11.65	53.19	81.31	51.21	52.98	77.75	29.77	34.89	52.84	46.16	48.03
58	E9_Dc	KnownBoundary	0	27.56	12.56	28.50	11.39	7.30	35.49	4.06	23.58	24.51	7.74	33.01	24.16	0.00	23.19	55.63	45.89	57.69	61.14	4.05	40.72	35.15	39.37	27.57
59	ER9d	ExonRegion	0	14.09	7.40	14.36	7.53	6.80	12.25	8.02	12.87	9.11	5.82	14.50	4.31	5.55	18.71	30.75	18.93	13.64	25.39	9.70	11.35	21.85	17.93	16.84
60	E9_Ab	KnownBoundary	0	3.11	6.38	0.00	0.00	7.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00	0.00
61	ER9e	ExonRegion	0	50.48	37.60	64.20	56.66	35.72	68.12	42.79	43.12	55.53	32.24	82.81	33.90	43.46	82.54	101.02	88.03	67.32	43.44	50.86	34.72	52.54	54.53	34.27
62	E9_Dd	KnownBoundary	0	183.88	88.21	56.80	56.10	121.82	105.34	91.86	30.64	46.67	27.88	89.92	61.67	122.07	107.25	175.78	172.01	94.53	51.90	57.41	26.78	88.03	82.30	56.51
63	ER9f	ExonRegion	0	11.75	14.10	7.53	5.41	7.52	16.33	10.93	6.05	5.73	2.89	7.79	3.47	10.18	9.56	14.07	12.57	6.65	7.92	6.00	4.20	4.22	7.36	6.08
64	E9_De	KnownBoundary	0	13.85	0.00	6.95	2.96	4.16	0.00	0.00	4.52	1.71	1.18	4.84	0.00	0.00	0.00	0.00	0.00	4.30	2.24	4.61	0.00	2.47	2.88	0.00
65	ER9g	ExonRegion	0	0.09	0.25	0.30	0.16	0.22	0.00	0.00	0.31	0.30	0.07	0.00	0.15	0.00	0.23	0.32	0.24	0.00	0.00	0.26	0.00	1.00	0.34	0.00
66	ER9h	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00