Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CBARA1 Gene 0 68.64 126.80 111.17 63.63 89.87 237.89 85.19 91.32 98.97 53.00 112.97 80.22 63.86 120.45 107.74 86.46 99.31 115.95 61.93 100.16 170.83 166.90 108.65 2 476605 Transcript 0 1.85 5.18 3.63 4.31 4.29 10.86 4.75 8.04 4.93 3.20 4.34 3.77 4.17 8.02 3.29 1.72 2.75 3.26 3.74 3.75 3.62 0.71 4.07 3 361114 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398761 Transcript 0 0.47 1.36 0.07 0.00 0.74 0.51 0.29 0.38 0.14 0.00 0.54 0.72 2.61 1.35 0.32 0.50 0.18 0.00 0.53 1.06 0.37 1.62 0.00 5 398763 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 401998 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 398765 Transcript 0 0.35 2.07 2.44 4.75 10.60 157.05 5.97 15.26 19.32 0.35 0.11 0.48 0.00 0.09 0.00 0.33 0.00 2.57 0.00 0.12 0.12 1.04 0.33 8 489666 Transcript 0 1.19 4.70 4.21 5.28 4.15 4.54 5.10 5.95 4.89 0.58 1.62 1.85 4.15 0.07 0.73 0.55 1.12 0.81 0.02 5.49 0.40 1.20 1.08 9 418483 Transcript 0 0.00 0.00 0.00 0.00 0.05 10.58 0.00 0.00 6.08 1.25 0.00 1.46 0.00 0.00 0.00 1.31 5.91 0.00 0.00 0.00 2.07 0.00 0.00 10 ER1a ExonRegion 0 2.12 0.00 0.18 0.97 0.76 15.19 3.22 0.49 0.35 1.15 0.00 0.00 1.34 7.42 8.29 1.27 1.89 0.00 3.19 1.22 4.72 1.79 3.78 11 ER1b ExonRegion 0 2.12 0.00 1.23 1.36 5.35 16.50 5.96 2.59 4.32 1.15 0.97 0.00 9.38 22.74 24.66 2.97 4.95 0.00 3.19 4.26 11.02 5.21 5.87 12 ER1c ExonRegion 1 44.42 71.96 48.11 20.59 70.32 197.62 92.19 34.66 42.72 33.21 55.89 5.63 18.71 38.14 93.59 46.28 80.29 31.17 38.98 47.17 180.47 100.30 79.19 13 E1a_E2a KnownJunction 0 54.38 143.86 109.69 65.03 90.83 265.36 112.70 89.87 107.06 70.54 68.54 13.20 12.99 47.21 68.24 73.91 69.47 129.50 66.73 78.68 217.83 108.20 97.74 14 ER2a ExonRegion 1 13.99 55.22 104.38 47.10 25.37 70.48 29.30 74.82 83.58 58.35 181.43 41.53 52.89 143.99 116.53 114.24 178.39 133.68 76.04 141.57 344.72 156.80 161.97 15 E2a_E3a KnownJunction 1 20.97 63.80 167.94 96.72 58.15 94.55 53.00 140.80 117.13 80.18 135.61 65.57 91.23 213.20 230.67 287.96 87.80 389.83 191.16 197.57 168.41 390.30 457.03 16 ER3a ExonRegion 0 50.31 143.22 144.59 87.67 212.73 588.62 211.90 126.03 97.54 63.91 169.99 169.03 91.36 193.92 133.84 158.74 161.67 177.56 95.00 165.24 190.69 255.50 212.03 17 E3a_E4a KnownJunction 0 197.89 321.52 191.74 119.00 172.67 433.39 241.70 187.54 148.87 97.88 241.48 264.24 179.05 264.47 140.80 147.48 323.42 90.82 116.33 212.08 321.43 413.94 192.49 18 ER4a ExonRegion 0 119.69 270.08 180.24 104.85 133.51 247.07 123.88 166.19 131.19 85.92 196.99 229.75 118.83 235.16 133.56 150.67 215.35 101.78 95.27 177.81 282.60 352.23 161.16 19 E4a_E5a KnownJunction 0 123.28 332.51 161.14 85.97 151.27 332.14 177.71 116.65 137.27 76.23 178.41 249.53 96.42 183.24 144.63 124.58 184.10 50.78 68.14 177.63 250.69 430.04 159.12 20 ER5a ExonRegion 0 137.09 300.28 171.08 83.79 235.16 374.80 196.31 152.54 139.68 98.92 214.73 236.35 173.00 247.57 138.73 118.07 188.53 80.21 57.55 133.85 208.80 395.11 168.99 21 E5a_E6a KnownJunction 0 0.00 6.71 7.78 2.06 8.66 5.79 4.50 0.00 1.68 6.15 14.37 7.65 6.82 25.55 4.94 3.59 7.39 4.73 9.60 3.26 5.81 0.00 3.76 22 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E5a_E9a KnownJunction 0 0.00 2.83 0.00 2.00 16.64 131.63 8.70 6.94 12.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.00 0.00 0.00 24 E5a_E10a KnownJunction 0 191.14 354.34 155.73 72.65 276.32 261.95 233.40 124.37 79.89 91.04 222.42 264.39 243.33 307.73 167.13 101.17 177.75 92.48 55.72 114.35 147.46 350.93 155.02 25 E6_Aa NovelBoundary 0 14.89 6.71 20.90 24.01 0.00 16.87 34.01 29.04 20.11 6.61 0.00 6.30 0.00 2.47 0.00 0.00 0.00 11.19 14.02 23.33 0.00 0.00 0.00 26 ER6a ExonRegion 0 1.59 9.20 6.32 8.76 9.11 13.71 14.01 12.56 19.63 7.77 9.42 11.59 8.93 11.63 5.63 5.83 7.40 6.58 3.47 8.45 5.69 2.25 12.44 27 E6_Da NovelBoundary 0 7.56 17.30 19.57 18.51 0.00 29.87 35.68 14.46 32.81 10.74 9.11 0.00 6.66 4.83 8.90 7.95 22.53 10.49 12.61 17.26 17.48 7.96 11.87 28 E6a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 I6 Intron 0 14.04 25.31 14.63 25.52 17.48 14.22 19.64 24.04 28.47 9.17 1.16 11.65 9.86 3.11 4.41 3.83 3.06 4.48 3.29 13.94 2.42 6.37 6.51 30 I6_SR2 SilentIntronRegion 0 44.95 74.42 18.11 26.26 15.84 15.04 15.97 22.34 21.34 5.91 2.10 18.16 7.46 3.07 7.75 3.73 6.16 3.85 2.77 16.15 3.06 6.30 10.32 31 I6_AR1 ActiveIntronRegion 0 3.08 8.30 13.59 18.43 12.19 10.88 18.30 22.60 31.32 7.79 1.27 12.67 9.21 1.94 4.57 3.59 0.26 3.05 2.11 13.56 0.18 9.83 4.86 32 I6_SR3 SilentIntronRegion 0 3.85 9.06 2.78 12.32 10.02 9.97 25.54 11.38 15.74 4.48 1.19 17.71 13.56 0.00 2.69 4.38 0.00 0.00 2.95 4.37 0.00 7.05 0.96 33 I6_AR2 ActiveIntronRegion 0 15.20 14.61 2.62 0.00 15.38 10.54 9.51 0.00 1.32 1.23 1.39 2.56 0.00 2.74 0.00 4.27 2.37 1.98 0.00 4.58 4.75 2.99 0.00 34 I6_AR3 ActiveIntronRegion 1 26.25 47.44 26.75 47.57 33.42 23.70 28.90 49.26 51.78 18.66 0.32 13.42 16.73 3.46 5.76 4.00 2.67 5.50 4.97 16.01 1.50 9.67 4.61 35 I6_SR4 SilentIntronRegion 0 10.27 21.58 21.58 70.64 49.30 22.21 32.54 67.15 63.45 25.04 1.11 9.62 9.03 1.80 2.15 4.57 6.54 11.05 9.26 13.28 1.18 9.14 7.18 36 I6_AR4 ActiveIntronRegion 0 7.41 19.25 16.60 32.81 19.34 17.01 23.10 21.60 28.15 10.52 0.10 12.07 15.22 0.98 1.75 2.36 2.14 3.22 2.88 13.76 1.33 3.89 5.36 37 E7a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER7a ExonRegion 0 1.41 4.07 0.20 0.00 2.23 1.53 0.88 1.15 0.41 0.00 1.61 2.16 7.82 4.06 0.97 1.49 0.55 0.00 1.59 3.19 1.10 4.86 0.00 39 I7_AR1 ActiveIntronRegion 0 8.92 1.95 4.93 3.71 4.67 3.75 9.83 5.26 5.02 1.10 0.00 7.55 15.17 1.24 2.22 0.00 2.74 0.08 0.00 3.21 1.97 3.81 3.00 40 ER8a ExonRegion 0 2.37 6.65 6.59 7.13 8.30 9.07 10.20 9.51 9.78 1.17 0.92 3.69 8.31 0.14 1.46 1.10 2.24 1.61 0.04 10.98 0.80 2.41 2.17 41 E8_Da NovelBoundary 1 0.00 3.16 0.00 5.09 4.33 5.56 21.29 4.60 11.92 0.00 0.00 23.86 28.24 0.00 0.00 0.00 4.58 0.00 0.00 8.76 3.15 2.82 0.00 42 E8a_E10a KnownJunction 0 0.00 2.76 1.83 3.43 0.00 0.00 0.00 2.38 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 I8 Intron 0 6.63 18.79 6.53 16.55 11.59 25.81 16.56 15.30 24.95 5.69 1.02 7.60 8.32 1.00 2.21 4.02 4.60 4.48 3.32 15.54 2.40 1.69 5.00 44 I8_SR2 SilentIntronRegion 0 7.91 18.51 7.88 18.33 13.96 24.81 17.51 17.17 25.80 5.82 1.01 8.44 9.76 1.05 1.92 4.15 5.27 4.64 3.43 16.15 2.37 1.44 5.66 45 I8_AR2 ActiveIntronRegion 0 18.33 77.54 13.67 31.83 15.65 23.60 28.34 31.64 43.92 12.79 1.81 16.03 9.97 1.05 8.54 5.21 5.79 3.77 5.59 16.43 3.35 2.19 5.15 46 I8_AR3 ActiveIntronRegion 0 4.66 10.66 3.49 17.06 9.76 47.67 12.60 17.99 30.44 7.36 1.14 2.46 2.46 1.06 0.79 1.26 1.38 3.72 2.83 14.04 1.96 2.64 4.16 47 I8_SR4 SilentIntronRegion 0 4.62 13.56 8.92 20.02 9.39 66.19 17.20 15.69 46.45 7.99 1.23 4.57 4.69 1.32 2.13 3.64 0.93 9.41 5.08 20.04 1.76 2.38 3.57 48 E9a_E10a KnownJunction 0 0.00 0.00 2.42 5.89 0.00 134.75 1.94 10.60 14.09 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 49 ER9a ExonRegion 0 1.06 3.39 4.90 6.36 15.16 204.77 7.28 28.23 31.70 0.00 0.32 1.44 0.00 0.27 0.00 0.99 0.00 3.70 0.00 0.35 0.37 3.13 0.98 50 I9 Intron 0 5.36 20.87 9.41 31.68 17.06 94.44 18.38 24.69 57.67 11.05 0.87 6.09 8.76 1.11 2.75 2.69 2.69 3.87 1.73 17.51 1.99 1.88 4.12 51 I9_SR1 SilentIntronRegion 0 4.90 15.20 9.38 30.35 16.38 99.99 19.19 21.79 56.92 10.09 0.73 5.03 6.54 1.22 3.02 2.55 3.60 4.07 2.32 18.02 2.48 1.71 4.86 52 I9_AR1 ActiveIntronRegion 0 6.39 33.30 9.53 34.72 18.63 82.90 16.71 31.13 59.64 13.20 1.20 8.43 13.62 0.87 2.20 3.01 0.73 3.46 0.46 16.49 0.94 2.28 2.53 53 E10_Aa NovelBoundary 1 20.67 39.60 12.42 49.74 32.17 121.12 32.86 34.95 62.99 9.83 2.21 0.00 32.47 0.00 4.57 0.00 0.00 8.29 0.00 14.32 0.00 0.00 0.00 54 ER10a ExonRegion 0 113.81 321.27 208.64 140.83 214.27 428.47 202.09 172.45 194.65 103.73 216.55 245.73 146.49 216.62 155.15 175.74 174.26 169.45 134.37 164.07 131.61 387.37 187.15 55 E10a_E12a KnownJunction 0 131.80 286.92 230.27 132.05 269.10 564.67 266.96 181.75 224.27 106.83 255.96 277.14 174.18 213.73 159.59 137.40 174.57 128.71 133.18 225.56 230.99 365.87 191.64 56 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.09 4.46 0.00 0.00 3.68 1.03 0.00 2.91 0.00 0.00 0.00 2.61 8.37 0.00 0.00 0.00 0.99 0.00 0.00 57 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 16.69 0.00 0.00 8.48 1.48 0.00 0.00 0.00 0.00 0.00 0.00 3.46 0.00 0.00 0.00 3.15 0.00 0.00 58 ER12a ExonRegion 0 102.03 306.58 203.32 128.93 208.16 467.99 180.30 166.93 215.42 118.42 239.49 173.13 136.58 198.40 173.38 136.54 165.32 142.05 101.09 171.80 218.41 327.14 158.37 59 E12a_E14a KnownJunction 0 127.43 365.53 277.37 194.01 226.32 419.02 192.11 171.48 237.21 135.55 240.48 198.96 164.92 188.12 200.88 160.56 117.91 234.79 112.29 178.14 197.19 335.38 202.57 60 E12b_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER12b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.99 0.00 1.24 0.00 0.00 1.08 0.00 0.41 0.73 0.00 0.00 0.00 0.80 0.00 0.55 1.04 2.94 62 E13a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER13a ExonRegion 0 1.06 0.00 0.00 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 0.00 4.69 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 64 E14_Ab NovelBoundary 0 42.30 147.34 163.33 112.17 76.23 106.87 83.25 91.55 134.00 74.22 66.70 68.27 30.19 73.40 32.39 39.31 65.17 125.73 25.13 76.19 82.29 122.10 108.07 65 ER14a ExonRegion 0 117.32 343.09 259.95 177.56 209.86 387.98 178.36 175.56 241.20 128.94 254.87 179.36 140.03 206.26 186.09 153.28 158.44 249.45 122.86 183.59 212.50 340.21 221.51 66 ER14b ExonRegion 0 154.45 328.48 249.80 151.42 215.64 521.44 193.78 196.45 230.88 123.88 225.18 181.50 150.47 279.00 219.01 188.12 216.51 302.85 149.38 226.89 388.53 326.80 259.96 67 E14a_E15a KnownJunction 0 285.16 350.46 202.21 135.98 197.37 621.35 219.22 187.59 228.30 113.68 229.32 168.81 126.29 340.57 274.18 217.38 247.03 292.62 116.33 259.06 395.44 380.69 273.25 68 I14_AR2 ActiveIntronRegion 0 8.57 19.37 11.09 20.25 17.97 11.96 21.69 10.21 8.70 2.79 4.88 0.00 14.07 4.18 8.01 4.81 2.51 3.70 9.56 9.32 9.55 5.66 5.87 69 I14_AR3 ActiveIntronRegion 0 9.57 27.99 9.69 20.77 30.20 4.72 24.52 12.10 10.29 5.57 6.26 0.00 13.40 5.65 11.19 5.38 3.46 3.78 8.34 9.22 10.18 4.17 8.39 70 I14_AR4 ActiveIntronRegion 0 8.87 41.92 6.88 16.93 31.70 12.20 25.00 16.22 11.59 5.91 3.87 1.17 8.84 2.06 9.71 12.69 6.60 3.41 3.19 8.43 5.85 4.65 7.00 71 I14_AR5 ActiveIntronRegion 0 6.35 42.76 2.91 15.69 14.32 24.04 20.83 15.37 10.25 4.56 3.13 7.14 7.61 0.48 5.33 13.09 4.82 1.85 2.15 6.27 4.17 8.78 5.48 72 I14_AR6 ActiveIntronRegion 0 25.65 33.61 3.68 20.44 16.84 13.27 28.43 12.76 10.10 1.86 3.24 1.78 3.45 4.01 7.34 3.58 2.91 1.36 6.37 6.70 8.17 6.74 2.68 73 I14_AR7 ActiveIntronRegion 0 22.81 16.88 7.29 18.11 14.64 8.65 20.83 12.69 9.63 3.76 1.02 5.93 11.62 2.04 8.94 5.40 7.97 5.15 6.27 8.36 3.44 4.28 3.73 74 I14_AR8 ActiveIntronRegion 0 21.56 19.51 9.08 11.41 22.91 10.83 10.43 12.80 11.81 1.43 5.80 12.99 8.65 2.64 3.45 7.62 0.72 8.72 6.77 3.12 0.00 1.50 18.35 75 I14_AR9 ActiveIntronRegion 0 23.04 27.56 12.93 12.25 17.59 9.01 17.42 13.93 11.03 4.80 4.25 7.76 7.36 4.79 8.61 13.39 8.04 13.04 5.67 13.82 9.39 5.88 16.34 76 I14_AR10 ActiveIntronRegion 0 13.89 21.52 7.58 16.82 14.30 5.48 10.94 9.45 5.94 2.69 1.87 8.79 10.81 1.27 5.83 6.47 5.58 1.89 1.15 7.06 2.66 2.74 13.65 77 I14_AR11 ActiveIntronRegion 0 8.43 9.59 6.18 12.26 12.40 5.01 14.94 8.15 6.79 4.73 1.52 8.03 15.94 2.64 7.73 7.29 7.68 4.54 3.32 7.52 7.95 1.87 8.52 78 I14_SR6 SilentIntronRegion 0 21.80 7.52 7.67 6.91 12.04 8.80 10.99 7.98 8.28 2.22 3.67 3.74 8.44 1.50 9.13 6.84 7.26 5.79 5.10 6.17 11.23 3.75 13.80 79 ER15a ExonRegion 0 117.53 205.85 218.79 112.69 115.27 321.07 109.59 152.33 192.60 88.32 164.17 124.39 128.02 210.01 199.79 119.79 156.27 179.63 73.59 189.95 305.60 248.69 166.90 80 E15a_E16a KnownJunction 0 179.14 299.42 201.44 129.95 193.04 472.80 153.82 214.57 244.59 90.31 232.27 154.70 186.03 232.68 266.27 178.93 188.97 273.01 143.06 224.41 417.00 394.16 224.08 81 ER16a ExonRegion 0 169.77 249.63 245.48 129.66 203.50 661.83 157.11 200.04 235.30 109.32 244.18 140.37 108.04 287.44 274.29 166.63 207.87 255.75 127.53 205.95 413.25 369.64 193.79 82 E16a_E17a KnownJunction 0 0.00 6.18 4.26 4.10 0.00 16.92 3.89 11.05 5.70 2.77 2.68 6.30 6.82 3.00 0.00 0.00 0.00 2.57 9.04 2.49 0.00 0.00 3.33 83 E16a_E18a KnownJunction 0 185.00 197.07 232.96 134.52 193.04 419.02 131.91 142.12 181.05 78.57 170.99 99.33 106.97 260.88 207.06 112.79 155.77 235.75 98.07 176.03 290.23 249.83 160.82 84 ER17a ExonRegion 0 6.08 10.83 3.95 8.81 7.20 17.44 7.65 16.52 7.15 2.88 1.53 0.83 5.32 6.06 4.13 1.31 2.59 7.11 0.90 5.00 6.10 0.90 5.21 85 E17a_E18a KnownJunction 0 3.19 3.35 2.96 5.46 4.33 6.98 0.00 15.69 0.00 1.67 2.37 0.00 0.00 2.47 0.00 0.00 0.00 1.82 0.00 5.82 3.03 0.00 0.00 86 ER18a ExonRegion 0 157.80 179.74 276.13 164.07 134.64 382.10 121.25 223.03 240.76 107.87 230.34 115.37 175.24 233.89 299.09 209.77 157.69 366.40 130.78 212.16 376.01 404.89 229.66 87 E18b_E19a KnownJunction 0 174.03 214.37 366.49 218.22 159.25 497.67 168.61 273.92 322.48 157.84 292.23 125.59 121.42 264.47 398.79 282.58 169.80 400.23 162.08 268.58 402.23 480.38 303.12 88 ER18b ExonRegion 0 135.46 201.32 317.98 190.80 127.10 456.62 134.38 246.30 290.87 139.35 301.53 132.05 126.63 275.29 342.35 270.46 170.00 378.79 159.27 253.19 415.40 457.33 290.73 89 ER19a ExonRegion 0 53.60 62.89 60.73 32.04 40.34 146.00 41.79 50.16 56.17 28.12 57.09 22.34 23.96 55.91 68.59 44.50 40.45 78.30 37.33 47.57 96.78 76.58 54.30