Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RHOBTB1 Gene 0 29.41 39.85 73.54 34.85 38.08 277.65 47.05 37.39 23.21 35.65 18.45 21.03 0.12 20.90 1.68 12.68 0.63 40.54 38.53 23.38 35.74 25.29 22.28 2 357917 Transcript 0 1.40 0.00 0.00 0.00 0.00 36.90 1.17 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 3 337910 Transcript 0 0.20 0.00 5.69 0.00 0.75 16.90 0.24 3.83 3.44 1.41 5.40 0.00 0.00 6.99 0.01 13.26 0.00 15.75 8.48 9.03 21.94 0.38 13.32 4 483488 Transcript 0 0.00 0.01 2.38 2.82 0.00 3.95 2.22 1.14 0.83 0.00 0.00 0.00 0.00 0.00 0.01 0.74 0.00 1.18 0.02 1.05 1.88 0.52 0.00 5 490827 Transcript 0 5.34 3.53 13.17 6.32 3.80 57.13 10.07 4.26 5.18 4.24 4.62 1.67 0.00 4.49 0.48 4.20 0.55 11.18 6.12 4.92 8.06 5.89 4.42 6 461910 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 496237 Transcript 0 9.96 9.45 5.98 2.24 10.07 34.19 6.31 2.44 1.89 1.48 0.80 0.76 0.00 3.06 2.56 0.87 0.19 6.30 6.18 3.25 4.67 0.98 2.25 8 ER1a ExonRegion 0 1.76 0.00 0.00 0.00 0.00 36.85 0.69 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 3.48 0.00 0.00 0.00 0.00 86.26 2.25 4.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.34 0.00 0.00 0.00 0.00 24.49 1.72 1.27 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 0.40 0.00 1.92 0.00 1.50 17.29 0.49 1.37 0.87 1.32 5.95 0.00 0.00 1.85 0.02 4.73 0.00 5.18 3.13 3.11 12.55 0.77 6.16 13 E3a_E4a KnownJunction 0 0.00 0.00 9.46 0.00 0.00 16.52 0.00 6.28 6.02 1.50 4.84 0.00 0.00 12.13 0.00 21.79 0.00 26.32 13.84 14.96 31.32 0.00 20.49 14 ER4a ExonRegion 0 3.24 0.32 9.88 2.03 4.04 33.69 1.12 18.54 4.17 8.05 10.88 6.45 0.00 12.20 2.28 19.70 0.00 43.55 26.29 13.10 26.53 2.53 17.39 15 E4a_E5a KnownJunction 0 3.78 2.57 9.93 4.13 4.33 18.57 3.97 24.36 4.57 15.66 9.21 0.00 0.00 9.54 0.00 26.57 0.00 44.02 47.53 20.45 21.87 6.12 24.50 16 ER5a ExonRegion 0 2.50 12.07 25.89 10.72 3.80 115.28 12.25 20.62 12.41 19.34 14.59 7.42 0.00 18.28 2.27 14.29 0.00 42.27 25.70 19.65 46.74 11.82 19.10 17 E5a_E6a KnownJunction 0 10.74 14.93 31.16 19.21 6.62 90.91 14.71 19.80 17.53 21.17 23.74 32.56 0.00 28.55 0.00 8.20 0.00 43.57 57.70 22.24 47.57 37.17 34.49 18 E5a_E7a NovelJunction 0 0.00 2.96 2.96 3.50 0.00 12.89 0.00 6.12 3.12 4.19 4.79 0.00 0.00 12.01 0.00 0.00 0.00 2.57 13.55 3.26 5.19 0.00 3.24 19 ER6a ExonRegion 0 3.03 24.42 28.86 20.06 5.87 121.22 16.31 22.70 16.32 31.75 23.01 20.52 0.00 23.94 3.01 13.52 0.00 40.69 35.56 20.13 55.75 24.02 29.08 20 E6a_E7a KnownJunction 0 10.67 41.97 26.70 13.92 19.19 149.52 15.77 25.96 17.82 24.31 9.74 11.70 0.00 17.84 5.07 12.90 0.00 9.33 16.94 17.51 51.40 15.98 24.41 21 ER7a ExonRegion 0 9.37 30.43 36.21 24.55 17.58 213.10 30.11 31.92 26.54 38.62 21.71 21.23 0.00 32.13 0.16 13.90 0.00 69.68 33.31 31.74 51.60 27.34 32.95 22 E7a_E8a KnownJunction 0 17.71 43.22 55.11 23.24 21.99 122.88 42.66 34.95 17.85 36.61 19.74 12.30 0.00 31.43 0.00 13.07 0.00 70.01 43.01 21.41 33.42 14.63 27.40 23 ER8a ExonRegion 0 7.81 42.09 41.32 19.97 24.34 241.42 37.94 28.76 24.86 36.28 21.20 19.98 0.82 28.97 0.85 14.00 0.94 50.16 43.18 23.25 54.11 24.84 28.75 24 E8_Ab KnownBoundary 0 0.00 12.04 45.59 17.95 11.12 199.54 35.07 41.81 17.13 26.41 23.53 24.91 0.00 43.03 0.00 11.79 0.00 51.19 43.39 19.43 51.40 25.53 20.57 25 ER8b ExonRegion 0 13.63 22.21 36.31 17.53 28.91 241.43 37.24 29.85 26.77 25.01 28.41 22.57 0.00 30.25 2.10 11.96 0.00 54.66 48.10 26.45 58.62 21.95 28.93 26 E8a_E9a KnownJunction 0 10.96 23.68 51.45 34.26 14.77 293.86 63.95 24.15 23.73 36.99 22.32 30.01 0.00 26.55 0.00 8.46 0.00 65.54 44.71 41.23 54.12 25.72 29.96 27 E8a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER9a ExonRegion 0 11.88 18.54 44.68 23.89 14.86 229.50 36.01 23.18 21.43 33.51 25.68 28.85 0.00 24.21 1.66 19.71 0.00 54.67 40.02 27.61 57.22 25.79 17.94 29 E9a_E10a KnownJunction 0 7.56 22.30 48.05 33.80 40.15 292.39 37.58 29.24 26.65 31.05 21.11 0.00 0.00 31.55 5.07 7.35 0.00 48.67 43.11 40.27 34.10 26.64 14.85 30 ER10a ExonRegion 0 13.97 36.60 70.36 36.85 30.28 275.46 46.26 38.25 29.27 42.69 28.97 17.12 0.00 33.01 2.88 24.05 0.85 91.38 43.03 35.17 58.25 38.30 36.21 31 E10a_E11a KnownJunction 0 0.00 0.00 5.14 5.93 0.00 2.16 1.68 2.55 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.27 0.00 0.00 2.59 0.00 0.00 32 E10a_E12b KnownJunction 0 24.08 15.33 64.46 23.31 19.35 273.42 48.27 26.70 16.96 22.64 22.11 6.00 0.00 24.55 5.93 20.25 4.02 55.63 20.33 26.85 35.71 41.70 29.02 33 ER11a ExonRegion 0 0.00 0.03 1.99 2.54 0.00 9.70 4.97 0.86 1.12 0.00 0.00 0.00 0.00 0.00 0.04 2.21 0.00 0.28 0.05 3.16 3.04 1.55 0.00 34 ER12a ExonRegion 0 10.58 6.10 30.63 9.54 8.03 126.53 21.18 12.10 9.26 10.32 9.66 2.16 0.00 12.18 1.45 10.40 1.65 25.87 15.93 9.57 18.73 15.63 11.75 35 ER12b ExonRegion 0 26.05 31.06 63.64 34.92 18.97 301.95 56.06 31.45 24.03 31.79 23.00 10.68 0.00 27.63 0.07 22.93 2.29 75.74 30.12 32.76 51.64 30.80 27.26 36 E12a_E13a KnownJunction 0 38.01 49.99 62.42 37.49 36.08 517.83 47.78 43.74 38.66 48.00 34.54 13.80 0.00 28.90 0.00 44.43 7.95 89.91 38.78 48.51 75.80 36.56 41.49 37 E13_Ab NovelBoundary 0 12.67 23.09 51.68 17.91 22.41 216.41 25.97 14.95 27.23 21.54 7.42 0.00 0.00 20.84 0.00 23.33 4.02 48.46 17.69 19.05 32.49 18.98 25.69 38 ER13a ExonRegion 0 25.53 37.75 60.66 32.54 34.12 398.97 39.55 35.97 32.11 42.79 29.24 9.47 0.00 27.10 0.00 37.34 5.78 87.88 34.04 34.18 65.28 29.82 34.87 39 ER13b ExonRegion 0 20.41 53.19 72.87 30.47 39.48 309.46 49.38 38.22 29.96 29.07 21.20 10.58 0.00 30.98 3.38 23.12 1.39 78.43 30.61 28.44 47.80 25.35 39.25 40 E13_Da KnownBoundary 0 18.52 11.51 25.22 16.22 4.33 71.21 0.00 2.09 7.00 8.03 12.63 0.00 0.00 5.18 0.00 8.37 0.00 15.63 3.48 6.52 15.75 8.08 12.80 41 E13a_E14b KnownJunction 0 38.75 72.75 58.93 29.03 61.55 442.59 76.67 48.06 22.68 23.29 9.74 6.30 0.00 40.85 0.00 7.69 4.21 67.36 44.05 45.06 53.50 10.72 51.64 42 ER13c ExonRegion 0 5.43 4.48 8.87 9.43 3.37 44.86 9.03 0.68 6.29 2.40 4.19 2.84 0.00 1.30 0.00 2.20 0.00 7.68 2.42 5.18 5.46 2.04 1.51 43 E13_Db NovelBoundary 0 0.00 0.00 1.83 15.38 4.33 43.16 16.21 2.51 3.10 2.18 7.58 0.00 0.00 4.94 0.00 0.00 0.00 6.76 0.00 0.00 7.85 8.70 4.35 44 E13b_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E14_Aa NovelBoundary 0 18.23 0.00 6.62 9.42 0.00 38.16 6.18 8.75 1.71 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.71 19.20 3.20 7.66 6.25 3.67 46 E14_Ab NovelBoundary 0 25.04 19.01 14.40 9.16 23.85 52.13 9.85 5.09 0.00 2.90 5.11 0.00 0.00 14.83 4.45 0.00 0.00 12.60 4.24 3.26 2.78 9.37 0.00 47 ER14a ExonRegion 0 9.96 9.45 5.98 2.24 10.07 34.19 6.31 2.44 1.89 1.48 0.80 0.76 0.00 3.06 2.56 0.87 0.19 6.30 6.18 3.25 4.67 0.98 2.25 48 ER14b ExonRegion 0 32.55 45.19 91.59 42.20 44.84 396.49 72.60 34.31 39.23 44.95 21.35 23.95 0.00 31.79 2.56 16.40 1.70 63.42 57.82 38.17 51.45 30.65 39.05 49 E14_Da KnownBoundary 0 27.12 49.66 74.81 38.86 29.46 334.18 65.58 30.03 38.25 52.25 22.90 42.76 0.00 26.84 0.00 4.02 0.00 39.67 49.88 45.96 36.51 21.06 24.41 50 E14_Db KnownBoundary 1 66.97 36.57 60.67 32.60 41.26 300.45 53.83 34.67 30.84 38.95 21.79 78.78 0.00 25.13 0.00 12.48 4.21 50.28 108.05 42.50 24.53 55.17 48.66 51 E14b_E14c KnownJunction 0 10.67 3.35 5.12 2.06 7.81 23.28 6.40 1.89 0.00 1.58 8.00 0.00 0.00 0.00 0.00 4.19 0.00 0.00 4.80 6.52 0.00 0.00 4.35 52 ER14c ExonRegion 0 49.36 49.10 87.61 46.09 41.67 345.02 62.27 36.05 42.74 56.44 31.69 62.47 0.00 27.44 1.04 13.59 3.30 54.51 106.82 56.38 31.32 44.20 44.05 53 ER14d ExonRegion 0 25.02 50.26 78.69 39.03 53.65 385.08 70.17 45.26 29.89 50.17 28.36 39.37 0.00 29.00 0.88 13.84 0.47 43.06 69.49 36.38 36.44 41.85 28.63 54 E14_Ac KnownBoundary 0 9.93 45.19 64.87 27.67 56.37 624.81 82.41 38.94 23.52 47.76 26.90 25.06 0.00 17.07 0.00 24.61 0.00 37.31 35.48 20.26 29.84 6.18 15.19 55 ER14e ExonRegion 0 35.45 35.59 64.44 35.96 52.62 433.15 71.44 58.96 24.17 55.22 25.69 48.86 0.00 28.58 1.26 13.75 0.00 35.17 69.73 31.64 23.58 54.82 25.17 56 E14_Dc KnownBoundary 0 22.67 22.56 48.73 19.38 38.79 144.92 23.80 31.34 12.24 31.16 15.21 18.01 0.00 7.42 4.45 0.00 0.00 1.95 24.94 17.90 7.85 13.04 14.08 57 E14_Dd KnownBoundary 0 27.63 12.04 31.93 6.89 39.30 177.51 37.94 32.41 8.88 27.51 13.79 25.81 0.00 0.00 0.00 12.65 0.00 10.61 8.66 8.50 7.78 10.84 4.35 58 ER14f ExonRegion 0 51.33 38.13 79.04 29.30 64.22 392.89 57.26 61.36 22.23 63.94 38.17 48.71 0.00 21.11 2.90 8.92 0.00 14.78 39.82 28.72 19.83 25.00 20.56 59 ER14g ExonRegion 0 60.89 62.71 133.90 60.94 67.89 399.57 71.40 58.63 28.42 48.43 17.72 27.19 0.00 18.06 2.47 12.04 0.78 32.79 43.88 24.77 25.89 31.12 19.82 60 IG6_AR1 ActiveIntergenicRegion 0 4.23 6.10 4.90 4.09 4.91 9.17 25.82 6.91 3.71 5.16 5.80 8.66 0.00 12.99 2.90 2.97 8.25 8.01 6.37 40.07 0.00 2.08 0.00 61 IG6_SR1 SilentIntergenicRegion 0 3.19 24.57 6.48 1.42 5.21 4.68 21.07 5.27 2.32 5.35 6.04 19.86 0.49 6.59 3.60 4.50 7.07 9.28 2.49 28.09 0.56 0.89 0.75