Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF37B Gene 0 54.01 34.59 20.64 50.48 59.52 88.12 54.80 53.33 65.42 44.77 39.59 35.70 45.59 29.73 19.40 31.37 41.39 56.95 35.31 92.74 14.09 36.39 28.90 2 435805 Transcript 0 17.41 4.51 6.15 11.14 9.55 23.54 13.80 20.69 16.30 10.12 11.13 0.00 0.00 10.39 7.60 12.09 20.14 32.82 11.52 32.11 6.59 5.79 10.45 3 473592 Transcript 0 9.20 14.82 5.37 17.06 19.52 34.04 13.25 8.16 12.02 10.08 6.25 6.54 7.65 7.27 11.04 11.32 10.34 33.03 19.90 49.78 6.36 5.26 9.97 4 452075 Transcript 0 12.59 16.83 7.19 18.41 17.16 33.85 18.57 17.80 26.64 15.84 19.52 12.13 8.27 10.90 3.92 13.73 15.96 35.79 13.71 49.85 7.54 15.93 9.60 5 452306 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.12 0.09 0.35 0.00 0.76 0.00 0.00 0.00 1.41 0.00 0.00 0.44 1.36 3.19 2.98 0.88 0.14 1.96 7 ER1b ExonRegion 0 1.18 0.00 0.00 0.00 0.00 18.34 1.91 1.73 0.82 1.15 0.00 0.00 0.00 2.71 0.97 3.30 8.80 8.62 7.08 11.58 7.35 2.08 6.85 8 ER1c ExonRegion 0 1.69 0.00 1.23 0.00 3.21 37.78 6.88 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 2.97 9.24 3.70 12.74 4.68 2.20 2.08 0.59 9 ER1d ExonRegion 0 4.23 2.54 1.23 0.00 12.04 68.68 17.01 0.60 0.68 1.03 1.93 0.00 0.00 10.96 0.73 9.51 13.86 6.65 14.65 12.34 3.97 2.40 13.66 10 ER1e ExonRegion 0 0.76 3.21 1.92 2.40 4.69 32.92 10.69 4.86 3.48 3.38 5.62 2.04 1.11 7.37 1.11 9.23 14.76 4.56 9.74 14.75 5.13 3.52 14.24 11 E1_Ad KnownBoundary 1 0.00 0.00 0.00 2.00 0.00 2.16 0.00 2.38 4.80 4.57 10.21 0.00 0.00 23.84 0.00 0.00 21.41 6.26 4.24 30.74 5.13 2.57 4.10 12 ER1f ExonRegion 0 3.88 0.00 2.36 4.24 0.00 7.34 0.00 7.14 3.77 2.93 2.65 0.00 0.52 17.11 9.46 18.16 10.94 19.47 30.20 17.93 7.06 16.13 33.55 13 E1_Ae KnownBoundary 0 13.11 0.00 6.21 12.79 0.00 0.00 0.00 8.01 14.12 4.00 4.84 0.00 0.00 9.36 0.00 28.88 9.35 33.58 38.50 6.14 0.00 10.96 46.18 14 ER1g ExonRegion 0 3.64 2.28 0.38 1.65 5.32 36.29 14.03 3.22 5.01 2.82 1.57 0.00 1.10 1.14 0.70 6.83 3.67 10.65 7.61 8.36 4.71 3.00 7.07 15 E1_Dc KnownBoundary 0 6.74 9.80 0.00 2.83 4.07 2.38 0.00 0.00 7.06 2.28 2.68 0.00 0.00 0.00 0.00 0.00 0.00 25.25 8.56 5.75 2.84 0.00 0.00 16 E1c_E1f KnownJunction 0 0.00 0.00 0.00 1.66 0.00 2.16 0.00 2.55 9.75 2.61 12.63 0.00 0.00 4.53 0.00 8.12 3.65 12.27 7.62 15.15 5.56 12.19 7.94 17 ER1h ExonRegion 0 7.53 5.50 0.00 0.03 0.20 4.36 0.10 0.03 0.42 0.83 0.11 0.00 0.00 0.05 0.05 1.46 0.06 3.20 0.12 0.10 0.08 0.08 0.05 18 E1_Af KnownBoundary 0 26.15 0.00 0.00 0.00 7.13 22.83 0.00 0.00 10.47 0.00 0.00 0.00 5.68 0.00 0.00 0.00 4.68 21.85 0.00 0.00 0.00 0.00 0.00 19 ER1i ExonRegion 0 17.33 6.32 3.84 8.51 4.72 23.44 11.08 6.36 16.13 10.37 11.29 1.24 2.91 12.22 7.80 11.90 12.91 36.30 13.86 34.86 13.00 7.46 8.85 20 E1_Dd KnownBoundary 0 9.71 3.35 8.01 6.89 0.00 7.84 8.48 17.83 20.60 10.15 20.06 0.00 6.82 9.83 4.45 11.88 17.67 55.01 35.48 32.85 14.58 5.69 11.44 21 E1d_E1g KnownJunction 0 14.00 8.35 3.87 21.18 3.48 26.46 4.24 14.91 22.51 3.33 20.06 6.00 0.00 11.71 4.45 7.95 20.38 66.70 22.21 50.11 8.59 13.29 7.94 22 ER1j ExonRegion 0 12.52 7.64 6.64 14.92 12.50 31.33 15.19 16.10 28.93 31.19 20.56 2.76 5.57 19.37 14.80 13.44 25.23 61.77 22.41 52.80 15.19 13.72 22.16 23 E1_Ag KnownBoundary 1 42.38 8.88 23.24 25.97 14.86 53.15 31.27 38.32 58.97 62.05 29.43 6.15 6.66 14.13 32.26 31.53 89.11 127.47 51.39 95.30 20.02 13.35 39.35 24 ER1k ExonRegion 0 42.66 27.96 20.60 39.86 35.98 83.72 35.04 46.08 68.45 51.97 61.23 15.87 18.58 43.04 26.39 51.73 76.91 160.76 60.66 121.98 29.35 41.74 42.61 25 E1_De KnownBoundary 0 3.63 6.05 9.11 12.45 7.22 7.04 3.80 1.60 9.84 4.94 9.32 0.00 0.00 0.00 0.00 3.16 17.39 9.82 9.13 11.51 2.78 2.27 4.01 26 E1e_E1h KnownJunction 0 34.82 9.01 12.30 22.27 19.10 46.96 27.51 41.03 32.61 19.47 22.27 0.00 0.00 19.37 15.20 24.18 39.83 64.29 19.86 61.23 12.29 11.45 18.95 27 E1_Df KnownBoundary 0 0.00 3.03 7.16 2.83 0.00 5.28 3.67 3.86 4.25 3.49 2.32 0.00 0.00 9.54 5.07 0.00 13.65 13.35 0.00 2.75 0.00 0.00 0.00 28 E1f_E1h KnownJunction 0 13.85 18.94 8.90 13.78 0.00 14.82 0.00 18.28 22.95 23.18 22.22 5.55 0.00 14.36 4.45 27.77 9.07 44.19 16.38 58.23 13.47 23.02 4.10 29 ER1l ExonRegion 0 23.81 24.91 22.06 27.26 14.72 28.42 11.58 21.61 42.61 36.99 32.86 12.99 7.04 26.39 14.51 32.69 33.01 76.68 26.28 75.00 16.53 29.69 13.95 30 ER1m ExonRegion 0 36.74 35.80 20.13 21.48 26.00 29.35 31.09 17.76 23.81 18.09 11.11 14.64 20.43 19.27 18.44 26.89 18.83 23.40 21.56 34.88 9.94 11.81 21.76 31 E1_Ah KnownBoundary 0 89.13 85.97 47.10 44.58 27.76 42.25 33.78 35.16 28.01 24.44 20.37 11.10 13.31 21.78 15.20 8.03 17.39 29.02 21.18 49.41 8.59 15.74 18.52 32 ER1n ExonRegion 0 71.96 48.14 42.89 52.26 47.66 91.60 64.08 64.10 65.48 53.11 55.95 17.69 47.79 60.12 36.97 55.91 66.64 106.31 54.43 145.74 24.13 39.62 46.53 33 E1_Dg NovelBoundary 0 28.75 17.37 22.65 18.08 15.79 0.00 21.55 18.44 16.55 8.76 7.37 0.00 6.17 0.00 5.44 8.03 8.23 1.95 8.66 12.53 2.47 2.63 3.33 34 E1g_E2a KnownJunction 0 0.00 2.83 0.00 17.28 28.10 32.25 3.80 2.55 6.31 1.56 9.58 5.25 6.82 0.00 0.00 4.36 0.00 29.56 25.41 54.71 5.50 3.12 0.00 35 E1g_E3a KnownJunction 0 103.80 2.70 17.80 19.21 34.13 72.12 62.62 41.85 54.95 46.10 79.86 17.71 39.93 75.17 25.34 37.43 58.91 83.61 34.82 125.98 23.78 52.42 39.86 36 I1 Intron 0 12.10 19.58 8.58 7.95 9.00 2.80 11.20 10.48 5.19 5.55 2.19 4.33 7.12 1.18 3.70 3.61 4.65 3.74 3.62 9.41 0.95 1.22 1.84 37 I1_SR1 SilentIntronRegion 0 12.11 19.60 8.58 7.95 9.01 2.80 11.21 10.49 5.19 5.56 2.19 4.34 7.13 1.18 3.70 3.61 4.65 3.75 3.62 9.42 0.95 1.22 1.84 38 E2_Aa NovelBoundary 1 10.00 29.40 11.50 14.78 28.35 10.90 14.44 15.61 7.64 14.40 4.37 32.71 26.13 11.65 15.82 40.67 12.62 11.07 27.20 21.54 9.14 0.00 25.35 39 ER2a ExonRegion 1 6.54 22.84 4.84 31.01 23.11 35.04 22.61 14.18 21.64 17.57 3.85 17.32 10.70 12.54 40.52 12.58 10.97 71.10 36.09 81.15 7.05 8.23 9.13 40 E2_Da NovelBoundary 0 139.36 120.50 128.47 109.28 109.00 83.47 138.49 166.84 142.76 150.72 82.44 25.81 6.82 17.84 41.91 69.04 175.13 170.08 102.03 117.93 65.55 23.21 84.08 41 E2a_E3a KnownJunction 0 9.48 24.27 4.08 30.20 32.00 36.91 4.42 9.61 16.90 19.85 7.32 0.00 6.82 2.47 6.18 11.88 8.23 65.87 13.84 108.53 8.34 2.82 14.08 42 I2 Intron 0 14.20 16.71 6.67 11.93 8.39 10.19 16.92 9.71 12.71 7.60 5.75 8.21 11.29 3.55 4.96 4.72 7.73 13.64 6.83 19.59 1.84 5.04 5.94 43 I2_AR1 ActiveIntronRegion 0 15.86 15.21 10.81 11.62 6.88 9.67 15.81 11.68 13.06 10.36 8.05 7.95 9.77 4.38 6.08 7.90 11.03 27.22 10.57 23.85 3.59 3.20 8.68 44 I2_SR2 SilentIntronRegion 0 14.15 18.60 4.93 13.72 10.28 11.62 19.70 9.76 14.19 6.86 4.79 9.22 13.76 2.94 4.49 3.32 6.44 6.73 4.92 19.21 0.97 6.30 4.79 45 E3_Aa NovelBoundary 0 9.93 14.73 6.86 14.78 3.82 27.26 15.19 6.70 13.74 6.74 9.42 6.30 6.82 12.01 14.09 19.65 9.26 22.55 13.84 20.45 0.00 6.25 4.35 46 ER3a ExonRegion 0 92.99 39.92 33.98 78.55 69.23 114.98 72.80 85.03 109.55 69.37 78.50 37.53 40.25 60.82 31.91 63.65 71.66 164.87 88.51 174.85 43.97 65.26 72.58 47 E3a_E4a KnownJunction 0 25.78 14.80 14.43 41.75 20.29 60.25 14.09 48.80 60.82 28.96 14.37 18.46 20.13 13.36 0.00 19.23 17.58 81.25 4.80 65.83 3.03 11.33 11.44 48 E4_Aa NovelBoundary 0 40.97 3.09 0.00 11.79 11.21 7.15 6.32 4.56 17.62 5.45 4.84 0.00 13.64 7.42 5.81 22.64 3.65 20.64 8.66 17.13 5.19 2.51 11.61 49 ER4a ExonRegion 0 89.64 41.08 20.05 52.61 77.04 128.40 60.49 73.93 90.50 48.61 79.00 37.25 81.77 58.86 35.00 44.89 67.64 103.41 36.68 131.59 22.68 62.09 37.94 50 E4_Da NovelBoundary 0 0.00 5.33 4.85 13.62 8.06 2.27 24.33 8.21 7.23 2.63 2.68 5.70 0.00 6.83 4.45 3.85 12.72 18.99 8.47 18.66 3.15 3.00 3.76 51 E4a_E5a KnownJunction 1 86.90 47.10 6.95 46.11 79.46 120.39 49.42 88.93 84.49 50.55 46.96 12.60 78.89 23.07 15.20 33.58 45.16 48.79 8.38 87.31 18.59 32.58 33.46 52 E5_Aa NovelBoundary 0 3.26 3.35 8.49 16.38 8.49 7.10 35.82 9.57 6.54 6.39 2.47 7.65 0.00 4.77 8.90 3.25 0.00 6.43 0.00 12.46 0.00 2.82 0.00 53 ER5a ExonRegion 0 106.37 53.25 15.30 75.86 122.20 145.88 107.52 104.04 113.57 61.60 85.52 46.57 114.56 53.66 20.20 51.40 91.02 50.72 35.47 146.99 19.83 66.98 41.76 54 E5_Ab KnownBoundary 0 190.85 87.55 52.45 153.79 196.86 201.02 201.12 182.49 213.45 132.81 140.93 95.13 195.44 82.70 62.43 74.17 125.29 71.55 59.77 235.60 10.93 109.67 67.44 55 ER5b ExonRegion 0 127.05 60.51 39.55 119.16 124.15 179.69 110.66 109.94 152.50 90.32 79.74 112.14 150.61 52.40 39.81 39.56 90.52 56.14 36.70 176.83 11.21 90.70 40.28 56 E5_Da KnownBoundary 0 133.51 134.12 37.05 107.94 153.23 221.01 198.47 108.56 159.75 101.43 83.92 118.84 133.27 48.03 41.41 55.20 99.21 47.05 12.99 189.13 5.31 93.69 44.13 57 ER5c ExonRegion 1 138.87 99.42 38.02 107.52 146.57 221.74 159.57 112.25 153.63 90.83 67.49 118.94 116.47 37.49 37.39 36.74 75.74 48.40 21.68 148.34 3.55 84.50 41.11 58 E5_Db KnownBoundary 1 183.51 102.94 45.92 96.72 185.23 271.09 177.36 88.06 130.29 76.99 64.17 155.15 114.44 35.08 28.06 29.05 76.11 36.27 49.60 194.37 3.15 79.24 49.43 59 ER5d ExonRegion 0 89.45 52.67 32.92 101.05 124.55 168.46 101.75 111.16 124.80 86.89 71.43 73.81 85.86 42.44 20.91 44.26 61.71 74.32 57.06 162.78 16.54 67.43 39.84 60 E5_Dc KnownBoundary 0 93.28 121.82 58.66 142.17 157.81 193.64 173.60 117.10 160.10 110.05 80.92 119.44 92.36 54.45 23.73 55.03 80.50 50.08 45.18 215.40 20.82 45.99 44.39 61 ER5e ExonRegion 0 22.50 40.00 16.00 37.01 65.17 91.98 70.06 35.48 51.35 34.26 23.17 36.99 33.10 12.99 6.80 11.08 30.75 19.98 8.65 75.90 2.55 15.24 18.42 62 IG48_AR5 ActiveIntergenicRegion 0 18.37 33.20 29.22 54.32 87.69 84.47 82.92 68.68 68.63 56.14 34.64 41.39 45.17 26.05 11.05 29.13 39.21 55.48 42.73 110.48 16.94 28.53 17.35 63 IG48_AR4 ActiveIntergenicRegion 0 10.25 6.91 7.49 14.70 30.20 22.56 23.96 16.54 15.24 18.48 7.79 7.55 9.25 3.16 1.16 11.17 12.97 12.38 14.65 21.28 2.83 4.43 6.21 64 IG48_SR4 SilentIntergenicRegion 0 13.02 26.29 17.60 37.64 88.66 71.09 66.67 49.05 48.88 38.11 15.72 17.67 18.01 17.91 4.19 20.74 18.72 40.87 28.55 70.55 5.53 22.31 20.89 65 IG48_AR3 ActiveIntergenicRegion 0 10.99 39.41 26.30 39.18 72.55 83.57 65.32 52.59 55.34 34.86 30.31 14.46 17.97 32.85 13.77 29.82 34.39 65.73 33.54 91.81 13.73 18.03 21.64 66 IG48_AR2 ActiveIntergenicRegion 0 26.13 79.15 16.17 17.88 48.49 68.42 49.96 24.89 32.11 26.61 21.54 14.77 18.51 20.98 9.88 18.00 20.38 38.23 22.23 57.12 14.20 11.19 9.46