Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL022344.4 Gene 0 8.11 92.53 43.62 3.19 43.91 69.02 74.16 57.22 64.60 68.37 0.00 0.00 0.38 0.00 0.20 0.29 0.00 166.60 105.49 100.98 0.00 0.00 0.00 2 411439 Transcript 0 6.91 97.22 51.36 3.01 42.22 77.09 85.64 69.61 76.99 77.78 0.00 0.00 0.17 0.00 0.09 0.13 0.00 197.54 123.34 112.46 0.00 0.00 0.00 3 ER1a ExonRegion 0 7.46 58.43 29.35 2.19 35.79 55.14 59.76 29.85 37.58 35.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 113.70 83.34 64.98 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 16.18 59.43 0.00 4.33 2.90 2.21 18.40 31.65 28.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 93.85 107.30 88.08 0.00 0.00 0.00 5 I1_AR1 ActiveIntronRegion 0 0.98 7.54 4.05 0.00 4.96 5.92 4.84 14.28 15.92 15.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.75 17.37 14.99 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 0.00 11.77 0.00 0.00 3.23 8.35 30.69 4.93 3.18 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 3.48 2.81 0.00 0.00 0.00 7 ER2a ExonRegion 0 4.87 57.40 51.28 1.96 60.73 95.97 64.61 61.15 69.35 70.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 279.68 184.99 141.26 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 10.08 125.11 51.51 7.09 65.96 122.15 111.64 111.52 126.79 115.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 383.44 183.53 146.63 0.00 0.00 0.00 9 E3_Aa NovelBoundary 0 3.78 20.59 14.87 0.00 0.00 0.00 30.16 2.51 7.52 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.67 12.05 28.63 0.00 0.00 0.00 10 ER3a ExonRegion 0 8.40 123.89 52.86 3.55 39.15 102.39 101.95 106.31 106.62 113.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 233.19 123.92 124.77 0.00 0.00 0.00 11 E3_Da NovelBoundary 0 0.00 62.75 7.92 1.63 18.17 2.90 34.84 10.43 13.28 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.52 3.76 5.50 0.00 0.00 0.00 12 E3a_E4a KnownJunction 0 7.56 172.67 63.81 1.60 39.98 108.18 182.08 103.71 99.48 104.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 139.16 93.18 110.00 0.00 0.00 0.00 13 I3 Intron 0 1.79 28.81 11.01 0.44 6.03 3.02 15.10 9.29 8.65 8.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.00 8.72 8.50 0.00 0.00 0.00 14 I3_SR1 SilentIntronRegion 0 1.79 28.82 11.01 0.44 6.03 3.02 15.11 9.30 8.65 8.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.00 8.72 8.51 0.00 0.00 0.00 15 ER4a ExonRegion 0 10.02 126.89 51.32 4.65 49.59 52.93 77.21 56.32 67.49 77.44 0.00 0.00 1.22 0.00 0.65 0.94 0.00 139.73 87.09 111.52 0.00 0.00 0.00 16 IG2 Intergenic 0 5.64 63.01 19.12 1.43 30.15 23.98 58.38 41.10 29.92 27.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.64 31.60 50.48 0.00 0.00 0.00 17 IG2_AR2 ActiveIntergenicRegion 0 21.39 103.40 40.97 2.80 61.19 47.89 85.79 59.34 44.00 55.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.17 84.13 90.24 0.00 0.00 0.00 18 IG2_SR2 SilentIntergenicRegion 0 2.68 30.86 19.01 0.86 21.44 21.01 61.36 28.07 22.67 22.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.44 46.18 55.71 0.00 0.00 0.00 19 IG2_AR1 ActiveIntergenicRegion 0 2.90 69.20 17.76 1.82 27.94 16.38 62.84 46.33 43.32 30.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.76 16.00 47.51 0.00 0.00 0.00 20 IG2_SR1 SilentIntergenicRegion 0 4.02 70.60 10.88 1.03 26.88 23.21 39.52 40.94 18.64 17.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.04 8.60 30.72 0.00 0.00 0.00