Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AGAP4	Gene	0	4.66	13.49	25.17	5.84	0.59	7.03	4.04	17.36	10.19	12.20	4.00	2.74	2.80	4.63	6.18	4.58	4.26	0.67	0.33	14.40	4.04	3.73	0.43
2	430779	Transcript	0	1.09	2.88	2.64	0.55	0.00	5.45	2.78	5.38	2.98	2.98	5.13	3.86	1.82	3.79	2.55	7.84	5.98	0.00	0.11	8.46	2.85	1.78	0.00
3	342551	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	355953	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	448048	Transcript	0	5.95	22.12	5.67	2.56	3.18	3.67	5.96	4.75	2.47	0.43	1.45	5.41	5.28	1.73	4.90	1.30	0.83	0.00	1.59	2.66	1.10	1.69	1.10
6	490752	Transcript	0	3.17	6.71	4.31	7.54	3.30	7.95	16.57	4.49	2.06	3.78	5.28	9.67	11.02	1.46	6.24	2.53	7.10	5.64	2.39	12.62	0.00	0.73	6.90
7	492347	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	495243	Transcript	0	0.00	0.00	0.44	0.40	0.64	0.00	0.00	0.01	0.53	0.01	1.55	2.31	2.66	0.01	1.09	3.11	2.13	0.00	0.01	1.00	0.00	0.86	0.60
9	ER1a	ExonRegion	0	0.03	0.94	2.69	0.47	0.00	0.07	0.01	5.44	2.92	2.03	1.41	0.82	0.89	1.19	0.98	0.04	4.78	0.00	0.74	5.04	1.08	0.50	0.00
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I1_AR3	ActiveIntronRegion	0	25.46	19.53	19.54	13.96	19.73	23.65	33.29	27.67	14.71	15.89	2.30	14.12	26.48	9.83	6.42	14.20	4.04	7.63	7.15	22.33	3.52	16.01	8.08
12	ER2a	ExonRegion	0	7.62	19.09	8.54	0.90	0.00	35.60	16.95	16.17	10.83	9.18	23.55	23.94	11.86	16.75	16.83	33.84	24.62	0.00	0.00	43.40	13.03	8.30	0.00
13	E2_Da	NovelBoundary	0	0.00	9.67	14.99	12.29	0.00	26.29	17.62	20.21	12.01	9.03	4.90	0.00	19.64	7.48	0.00	7.35	8.51	0.00	4.52	45.25	8.65	6.25	0.00
14	E2a_E3a	KnownJunction	0	0.00	0.00	5.03	2.03	0.00	2.27	2.25	11.71	4.46	7.09	9.48	0.00	0.00	7.83	0.00	18.88	8.13	0.00	0.00	8.31	4.94	3.12	0.00
15	I2_AR1	ActiveIntronRegion	0	1.24	2.51	9.59	10.90	0.00	11.97	3.18	15.33	6.44	13.98	0.00	0.00	0.45	4.58	2.67	4.51	0.77	0.32	0.00	10.43	3.60	9.24	0.00
16	ER3a	ExonRegion	0	0.00	0.13	2.23	0.43	0.00	0.19	0.28	4.35	2.67	2.57	1.51	2.28	0.00	0.74	0.06	2.10	4.31	0.00	0.00	2.49	0.88	0.55	0.00
17	E3a_E4d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E4_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E4_Ac	KnownBoundary	0	64.53	12.96	36.75	23.74	15.62	39.47	13.03	46.95	50.98	31.16	18.00	0.00	27.76	19.25	10.26	34.26	37.21	86.47	23.72	12.59	36.57	3.12	21.43
22	E4_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER4c	ExonRegion	0	0.00	0.00	0.18	0.00	0.00	1.83	0.00	0.37	0.09	0.25	0.28	0.31	4.36	0.00	0.00	0.00	0.71	0.00	0.00	0.76	0.00	0.00	0.00
24	ER4d	ExonRegion	0	0.00	0.00	1.83	0.29	0.00	1.14	0.00	5.65	0.36	2.28	3.05	10.70	3.92	4.45	2.76	9.30	3.92	0.00	0.00	5.13	0.00	1.25	0.00
25	E4_Ae	KnownBoundary	0	79.35	18.35	92.19	83.07	48.13	63.60	31.75	173.17	189.29	58.88	133.24	12.60	28.08	75.93	66.63	176.36	126.79	309.37	90.92	118.44	87.85	81.62	59.92
26	ER4e	ExonRegion	0	0.00	0.00	1.12	0.77	0.00	0.76	0.00	1.46	0.79	1.20	0.00	0.00	0.00	0.59	2.22	4.14	0.00	0.00	0.00	2.57	0.00	0.00	0.00
27	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E4a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER5a	ExonRegion	0	0.00	0.91	0.27	1.59	0.00	0.49	0.00	2.27	1.36	0.38	1.73	4.07	0.56	0.46	0.65	8.92	1.63	0.00	1.24	0.00	0.00	1.80	0.44
30	E5a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E5b_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER5b	ExonRegion	0	0.00	2.03	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER6a	ExonRegion	0	0.00	0.00	0.87	0.03	1.29	0.00	0.00	0.02	0.74	0.02	1.86	1.76	3.43	0.02	1.02	0.25	2.93	0.00	0.03	2.01	0.00	0.04	0.03
34	E6_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E6_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER6b	ExonRegion	0	0.00	1.02	3.06	3.41	0.00	0.00	0.00	1.73	5.56	2.29	3.87	6.49	4.69	1.62	5.80	26.75	6.60	1.85	3.19	0.00	0.00	4.17	2.94
37	ER6c	ExonRegion	0	5.14	18.93	9.51	12.97	5.12	5.50	10.20	11.59	8.25	11.55	9.41	20.95	17.04	2.13	6.27	12.33	9.56	8.78	6.09	12.80	0.00	5.21	6.56
38	E6_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER6d	ExonRegion	0	3.17	6.71	4.31	7.54	3.30	7.95	16.57	4.49	2.06	3.78	5.28	9.67	11.02	1.46	6.24	2.53	7.10	5.64	2.39	12.62	0.00	0.73	6.90
42	E6_Db	NovelBoundary	0	25.49	19.60	16.47	28.07	19.44	19.48	42.97	23.04	23.38	19.64	7.95	52.22	19.97	2.12	13.72	8.72	22.81	6.76	8.28	56.63	0.00	8.39	12.89
43	ER7a	ExonRegion	0	1.09	0.17	0.00	0.12	0.00	1.83	0.00	0.00	1.24	0.03	1.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E7_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER7b	ExonRegion	0	0.00	0.00	0.00	0.78	0.00	0.00	0.00	0.00	0.31	0.00	1.25	2.86	1.88	0.00	1.17	5.97	1.33	0.00	0.00	0.00	0.00	1.67	1.18
47	ER8a	ExonRegion	0	2.81	0.00	0.00	0.00	1.27	0.20	0.00	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00
48	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER9a	ExonRegion	0	0.06	1.98	0.00	0.00	0.30	0.00	0.00	0.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.29	0.00
50	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER10a	ExonRegion	0	4.11	0.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER11a	ExonRegion	0	5.15	3.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E11_Da	KnownBoundary	0	323.39	149.64	171.49	165.85	147.28	223.56	108.77	205.95	277.05	85.80	71.33	130.69	148.37	57.92	65.64	154.06	82.66	134.56	96.19	93.19	53.75	105.51	66.67
55	ER11b	ExonRegion	0	8.18	24.68	48.71	10.59	0.68	11.86	6.36	31.93	18.77	22.82	5.77	2.07	3.31	7.96	10.60	5.57	5.51	0.81	0.17	24.76	7.36	6.47	0.25
56	ER11c	ExonRegion	0	11.91	44.23	11.33	5.11	6.35	7.34	11.92	9.51	4.94	0.86	2.90	10.82	10.55	3.45	9.79	2.60	1.65	0.00	3.19	5.32	2.20	3.39	2.20