Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-178A10.1 Gene 0 28.34 143.68 109.59 56.37 14.04 2.96 17.53 3.17 5.79 24.51 3.53 0.30 0.25 0.38 0.41 0.63 0.35 124.92 99.17 99.29 14.56 16.34 10.36 2 429940 Transcript 0 22.82 76.76 149.58 115.70 36.50 0.00 20.89 4.68 7.84 41.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.29 142.69 58.55 24.46 38.82 21.00 3 374538 Transcript 0 0.00 9.27 6.56 1.63 0.00 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 3.26 0.00 0.00 0.00 4 332123 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 424751 Transcript 0 4.08 2.64 3.92 1.45 0.00 0.00 5.27 0.00 0.00 2.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.09 1.78 12.55 0.80 0.31 0.00 6 ER1a ExonRegion 0 0.16 2.15 0.05 2.13 0.76 0.00 1.05 0.00 0.00 0.24 0.15 0.00 0.00 0.00 0.00 0.00 0.00 3.87 13.28 3.13 0.00 0.00 1.66 7 E1_Ab KnownBoundary 0 0.00 2.83 0.00 4.06 3.82 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.80 4.80 5.94 0.00 2.94 4.35 8 ER1b ExonRegion 0 10.18 50.53 27.49 8.03 12.28 0.00 30.20 1.28 0.00 11.02 1.07 0.00 0.00 0.00 0.00 0.00 0.00 136.54 88.52 88.41 2.31 4.31 5.42 9 E1_Ac KnownBoundary 0 10.30 21.51 33.71 5.86 12.65 0.00 3.89 1.85 1.53 11.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.04 57.32 62.26 3.15 3.12 4.18 10 ER1c ExonRegion 0 7.67 25.63 52.98 16.01 1.66 1.24 4.68 1.13 0.25 23.46 3.11 0.00 0.00 0.00 0.00 0.00 0.00 120.13 89.67 111.40 15.17 9.75 6.81 11 E1_Da KnownBoundary 0 0.00 6.51 16.20 9.39 0.00 0.00 10.47 0.00 0.00 18.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.14 9.13 50.62 2.53 3.12 0.00 12 E1a_E2a KnownJunction 0 0.00 42.56 57.77 34.76 0.00 2.78 14.49 0.00 1.59 24.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 174.27 83.86 92.81 16.68 2.39 0.00 13 ER1d ExonRegion 0 2.09 5.28 7.85 2.90 0.00 0.00 10.54 0.00 0.00 5.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.19 3.56 25.10 1.60 0.62 0.00 14 E1_Db NovelBoundary 0 0.00 0.00 14.10 7.33 0.00 0.00 5.70 0.00 1.77 3.09 2.68 0.00 0.00 0.00 0.00 0.00 0.00 19.52 8.75 45.38 5.00 0.00 0.00 15 E1b_E2a KnownJunction 0 6.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I1 Intron 0 3.86 28.26 23.77 11.92 6.32 1.24 8.84 1.22 0.99 9.57 0.91 0.00 0.00 0.00 0.00 0.00 0.00 50.94 23.63 35.88 3.42 5.34 2.77 17 I1_AR1 ActiveIntronRegion 0 2.23 22.05 19.82 7.20 3.03 1.10 5.23 0.12 0.92 7.33 0.39 0.00 0.00 0.00 0.00 0.00 0.00 50.35 17.89 32.71 4.40 3.62 2.34 18 I1_SR1 SilentIntronRegion 0 7.28 41.39 32.15 21.85 13.23 1.53 16.45 3.53 1.15 14.30 2.02 0.00 0.00 0.00 0.00 0.00 0.00 52.38 35.76 42.67 1.38 8.97 3.68 19 E2_Aa NovelBoundary 0 14.67 272.39 71.79 57.57 15.87 5.56 40.50 2.55 1.79 30.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.39 58.64 69.61 9.27 2.94 0.00 20 ER2a ExonRegion 0 30.63 209.88 113.02 52.63 18.39 1.53 32.55 0.72 3.91 36.32 2.96 0.00 0.00 0.00 0.00 0.00 0.00 185.46 93.18 127.55 23.76 11.15 11.09 21 E2_Da NovelBoundary 0 3.48 30.78 37.99 9.42 0.00 0.00 0.00 0.00 0.00 9.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.19 18.17 36.94 0.00 0.00 0.00 22 E2a_E3a KnownJunction 0 38.38 159.38 117.03 59.60 30.98 2.73 21.82 1.85 7.23 19.56 9.16 0.00 0.00 0.00 0.00 0.00 0.00 206.77 90.07 155.19 32.00 8.27 4.10 23 I2 Intron 0 4.64 43.00 45.78 21.68 2.92 1.30 7.09 0.98 2.41 6.08 0.38 0.37 0.07 0.00 0.11 0.11 0.00 22.48 25.13 23.40 1.55 1.64 1.70 24 I2_SR1 SilentIntronRegion 0 5.47 45.00 56.25 22.70 2.53 0.22 7.67 0.30 1.15 5.77 0.42 0.06 0.00 0.00 0.07 0.10 0.00 24.99 28.40 25.69 1.15 1.06 1.64 25 I2_AR3 ActiveIntronRegion 0 4.35 70.44 50.17 29.63 5.36 0.47 8.35 0.98 2.89 10.86 0.49 0.91 0.00 0.00 0.89 0.76 0.00 23.73 31.38 24.38 0.84 4.05 2.15 26 I2_SR2 SilentIntronRegion 0 3.25 34.83 29.83 19.19 3.13 3.28 5.98 2.09 4.42 5.78 0.31 0.77 0.21 0.00 0.00 0.00 0.00 19.02 19.24 19.85 2.27 2.07 1.77 27 E3_Aa NovelBoundary 0 9.85 60.25 44.71 40.15 19.35 7.50 29.24 6.49 8.51 20.28 2.53 0.00 6.33 2.41 0.00 0.00 0.00 81.58 75.48 67.50 8.71 0.00 11.87 28 ER3a ExonRegion 0 25.88 170.66 127.87 67.03 11.68 1.51 26.47 1.80 9.09 41.16 8.27 0.00 0.00 0.00 0.00 0.00 0.00 221.66 124.12 162.19 23.26 23.52 13.06 29 E3_Da NovelBoundary 0 0.00 6.05 3.43 2.06 0.00 0.00 13.12 0.00 4.89 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.03 42.82 8.37 2.66 0.00 7.26 30 E3a_E4a KnownJunction 0 59.79 238.58 133.76 87.10 45.16 10.73 38.82 2.34 11.05 41.29 11.63 0.00 0.00 0.00 0.00 0.00 0.00 222.11 207.06 212.91 25.88 22.78 23.90 31 E3a_E5b KnownJunction 0 0.00 9.27 6.56 1.63 0.00 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 3.26 0.00 0.00 0.00 32 E4_Aa NovelBoundary 0 14.89 39.93 42.07 43.48 15.70 17.83 15.06 14.46 9.92 12.36 4.16 0.00 0.00 0.00 0.00 8.72 0.00 50.37 33.51 60.91 12.11 8.02 19.55 33 ER4a ExonRegion 0 42.94 256.85 171.42 113.45 31.38 6.14 34.78 6.14 13.41 52.30 8.00 0.00 1.50 0.00 0.00 1.15 0.64 243.16 188.95 197.31 27.62 34.14 19.91 34 E4_Da NovelBoundary 0 23.34 424.33 132.22 76.55 24.19 15.50 18.50 0.00 15.02 41.34 7.16 0.00 0.00 0.00 0.00 0.00 8.51 323.00 299.59 255.09 20.08 54.93 18.18 35 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E4a_E5b KnownJunction 0 22.82 76.76 149.58 115.70 36.50 0.00 20.89 4.68 7.84 41.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.29 142.69 58.55 24.46 38.82 21.00 37 E5_Aa NovelBoundary 0 10.00 64.86 73.42 50.51 7.47 0.00 0.00 8.42 7.26 9.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.45 46.40 11.89 2.84 9.25 0.00 38 E5_Ab NovelBoundary 0 10.67 76.50 78.09 26.24 0.00 0.00 5.21 0.00 5.09 7.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.28 39.34 25.57 2.35 0.00 0.00 39 ER5a ExonRegion 0 6.70 53.21 18.69 9.65 1.78 0.92 5.08 0.29 0.93 3.44 0.48 0.00 0.00 0.00 0.00 0.00 0.00 20.79 45.13 22.87 4.41 4.51 1.47 40 ER5b ExonRegion 0 33.49 152.83 122.52 61.13 14.27 3.53 13.88 3.94 6.23 18.93 2.82 0.55 0.15 0.70 0.75 0.92 0.51 95.22 91.83 76.49 11.90 16.50 10.14 41 IG48_AR2 ActiveIntergenicRegion 0 26.13 79.15 16.17 17.88 48.49 68.42 49.96 24.89 32.11 26.61 21.54 14.77 18.51 20.98 9.88 18.00 20.38 38.23 22.23 57.12 14.20 11.19 9.46 42 IG48_AR3 ActiveIntergenicRegion 0 10.99 39.41 26.30 39.18 72.55 83.57 65.32 52.59 55.34 34.86 30.31 14.46 17.97 32.85 13.77 29.82 34.39 65.73 33.54 91.81 13.73 18.03 21.64 43 IG48_SR4 SilentIntergenicRegion 0 13.02 26.29 17.60 37.64 88.66 71.09 66.67 49.05 48.88 38.11 15.72 17.67 18.01 17.91 4.19 20.74 18.72 40.87 28.55 70.55 5.53 22.31 20.89 44 IG48_AR4 ActiveIntergenicRegion 0 10.25 6.91 7.49 14.70 30.20 22.56 23.96 16.54 15.24 18.48 7.79 7.55 9.25 3.16 1.16 11.17 12.97 12.38 14.65 21.28 2.83 4.43 6.21 45 IG48_AR5 ActiveIntergenicRegion 0 18.37 33.20 29.22 54.32 87.69 84.47 82.92 68.68 68.63 56.14 34.64 41.39 45.17 26.05 11.05 29.13 39.21 55.48 42.73 110.48 16.94 28.53 17.35