Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CXCL12	Gene	0	510.11	6.44	25.68	20.56	215.91	52.33	58.55	60.36	71.66	13.46	3.47	0.21	0.08	0.12	0.00	0.00	0.06	6.02	3.40	0.66	313.69	100.54	56.81
2	496375	Transcript	0	0.52	0.00	0.00	0.00	0.00	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.21	0.29
3	395795	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	343575	Transcript	0	832.23	2.92	17.49	35.79	237.98	64.99	58.92	65.22	93.85	18.77	5.51	0.71	0.00	0.05	0.00	0.00	0.00	14.87	9.26	1.49	801.69	210.35	91.82
5	395793	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	374429	Transcript	0	204.29	5.77	17.04	9.47	95.92	24.93	35.29	37.02	54.41	9.39	2.24	0.07	0.06	0.04	0.00	0.00	0.05	1.89	0.84	0.22	74.35	60.63	40.93
7	488591	Transcript	0	5.21	0.29	0.00	0.29	0.62	0.00	2.11	2.24	2.38	0.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.95	1.81	0.85
8	395794	Transcript	0	0.00	0.00	2.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	374426	Transcript	0	23.37	4.90	3.70	0.94	8.93	3.10	7.44	9.79	11.04	4.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.49	0.00	20.57	5.76	11.75
10	ER1a	ExonRegion	0	1.04	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.23	0.41	0.58
11	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2b	ExonRegion	0	13.85	0.00	0.00	0.00	8.64	12.00	3.49	0.00	1.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	31.05	3.41	2.80
14	E2_Ad	KnownBoundary	0	26.15	0.00	0.00	0.00	21.48	22.60	11.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	61.22	21.62	16.90
15	E2_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	16.21	5.22	4.33	0.00	0.00	1.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	28.17	3.12	13.06
16	ER2c	ExonRegion	0	31.75	0.00	0.00	0.00	25.74	30.74	11.16	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	96.65	14.39	22.23
17	ER2d	ExonRegion	0	31.75	0.00	0.00	0.00	29.43	31.17	11.92	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	101.00	14.58	23.49
18	ER2e	ExonRegion	0	55.81	0.00	0.93	1.34	16.33	11.71	4.62	3.28	9.14	0.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.98	0.00	0.00	117.65	10.40	21.61
19	E2a_E3a	KnownJunction	0	104.61	0.00	3.67	5.56	7.89	0.00	4.15	13.72	28.04	5.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.46	0.00	0.00	277.07	16.78	39.52
20	ER3a	ExonRegion	0	90.39	0.04	7.86	11.10	27.76	6.80	6.21	19.55	32.09	2.05	0.08	0.00	0.00	0.00	0.00	0.00	0.00	5.89	0.00	1.02	444.09	67.06	46.62
21	E3_Da	KnownBoundary	0	191.52	0.00	14.99	16.28	93.97	25.33	7.02	37.50	56.08	5.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	3.26	603.26	102.26	50.96
22	E3a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3b	ExonRegion	0	210.77	1.92	27.47	9.40	84.02	36.86	16.21	42.84	81.25	13.06	13.23	0.00	0.00	0.00	0.00	0.00	0.00	7.50	4.64	4.04	1092.06	115.75	77.49
24	E3_Db	KnownBoundary	0	3.48	0.00	0.00	0.00	7.81	0.00	0.00	0.00	4.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.90	0.00	0.00
25	E3b_E4a	KnownJunction	0	327.91	2.83	20.46	6.26	128.52	33.11	27.91	50.93	86.05	14.24	4.58	0.00	0.00	0.00	0.00	0.00	0.00	7.50	0.00	0.00	1173.15	105.69	58.90
26	ER3c	ExonRegion	0	5.21	0.29	0.00	0.29	0.62	0.00	2.11	2.24	2.38	0.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.95	1.81	0.85
27	ER4a	ExonRegion	0	285.02	6.99	31.58	22.03	172.82	60.28	42.26	71.07	116.85	18.02	4.91	0.00	0.00	0.00	0.00	0.00	0.00	10.17	3.62	1.74	1038.30	158.08	110.65
28	E4_Da	KnownBoundary	0	609.96	6.71	42.37	34.46	229.80	51.45	55.87	102.15	141.64	25.55	7.53	0.00	0.00	0.00	0.00	0.00	0.00	13.64	0.00	3.26	1264.46	249.83	105.76
29	E4a_E4c	KnownJunction	0	0.00	0.00	2.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E4a_E5a	KnownJunction	0	16.74	6.05	3.34	0.00	4.33	0.00	6.23	11.95	4.80	4.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.66	0.00	8.37
31	E4a_E6a	KnownJunction	0	33.04	0.00	0.00	3.23	44.31	10.62	14.97	6.33	29.28	4.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	49.11	54.50	24.58
32	ER4b	ExonRegion	0	420.82	2.36	29.23	28.65	209.98	56.80	44.27	75.51	112.19	21.50	11.96	0.00	0.00	0.00	0.00	0.00	0.00	17.97	2.55	3.67	1482.33	228.90	95.48
33	E4_Db	KnownBoundary	0	347.69	0.00	25.52	27.74	253.82	50.48	41.07	43.00	113.97	19.18	5.05	0.00	0.00	0.00	0.00	0.00	0.00	27.98	4.14	0.00	968.79	218.11	123.52
34	ER4c	ExonRegion	0	864.46	3.27	27.47	51.06	322.77	82.58	68.39	90.39	145.54	23.97	7.95	0.84	0.00	0.00	0.00	0.00	0.00	20.64	11.90	2.64	1099.56	314.09	124.83
35	ER4d	ExonRegion	0	1101.82	1.36	22.47	73.03	480.07	111.71	110.77	101.55	178.78	22.75	9.18	0.00	0.00	0.00	0.00	0.00	0.00	12.63	28.93	3.01	965.78	417.57	165.19
36	ER4e	ExonRegion	0	935.71	4.16	19.24	40.61	304.25	101.39	91.36	89.45	119.41	26.54	8.57	1.29	0.00	0.16	0.00	0.00	0.00	23.96	15.89	1.85	1299.10	270.78	145.72
37	E4_Ac	KnownBoundary	0	1569.98	0.00	23.00	32.16	292.61	151.62	109.83	114.76	106.05	29.25	4.26	0.00	0.00	0.00	0.00	0.00	0.00	17.95	26.82	0.00	1276.88	248.49	141.96
38	ER4f	ExonRegion	0	1522.53	1.90	31.46	50.94	768.41	146.81	154.40	95.17	103.75	23.38	6.67	0.00	0.00	0.28	0.00	0.00	0.00	9.29	6.87	1.17	704.50	211.62	86.68
39	E4_Dd	NovelBoundary	0	2167.20	3.35	17.15	37.66	263.50	33.28	51.67	54.34	50.06	13.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	15.63	119.04	31.93
40	E4_De	NovelBoundary	0	144.77	0.00	1.69	9.39	33.36	16.58	11.97	9.12	23.06	11.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.42	34.54	0.00
41	ER4g	ExonRegion	0	696.54	1.31	5.77	15.70	86.92	11.00	17.00	15.83	16.61	5.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.40	46.17	4.93
42	I4	Intron	0	44.61	0.10	1.20	1.34	15.61	5.61	6.91	3.51	9.01	1.37	0.27	0.00	0.00	0.00	0.00	0.00	0.00	0.17	0.15	0.20	27.56	10.49	11.74
43	I4_AR1	ActiveIntronRegion	0	74.80	0.00	1.31	1.05	48.85	8.07	15.32	2.59	3.33	0.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.41	19.08	6.29
44	I4_SR1	SilentIntronRegion	0	21.79	0.00	1.23	1.56	11.11	2.47	3.18	4.17	11.12	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	18.28	11.31	15.48
45	I4_AR2	ActiveIntronRegion	0	46.29	0.12	1.19	1.32	13.74	5.97	6.91	3.48	9.11	1.42	0.34	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.19	0.25	30.74	9.66	11.56
46	ER5a	ExonRegion	0	30.00	3.75	4.06	1.87	13.52	6.20	8.66	7.63	17.28	4.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.98	0.00	33.48	11.52	15.13
47	E5_Da	NovelBoundary	0	20.89	2.89	9.55	1.63	14.69	0.00	8.74	17.74	25.87	2.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	44.48	3.06	20.06
48	I5	Intron	0	32.18	2.30	7.16	2.05	11.96	11.46	12.93	17.60	22.81	4.35	0.55	0.00	0.00	0.05	0.00	0.06	0.00	2.10	0.45	0.00	50.77	10.40	15.14
49	I5_AR1	ActiveIntronRegion	0	24.77	3.32	5.15	0.50	8.51	5.87	8.59	7.77	16.66	2.47	0.49	0.00	0.00	0.00	0.00	0.37	0.00	0.82	0.00	0.00	35.26	5.78	14.52
50	I5_SR1	SilentIntronRegion	0	43.18	0.59	6.54	1.20	8.25	10.88	13.56	8.33	30.31	5.46	1.11	0.00	0.00	0.00	0.00	0.00	0.00	4.75	0.00	0.00	50.49	10.16	10.50
51	I5_AR2	ActiveIntronRegion	0	32.75	2.25	7.65	2.46	13.03	12.69	13.79	20.52	23.43	4.65	0.51	0.00	0.00	0.06	0.00	0.00	0.00	2.12	0.59	0.00	54.10	11.40	15.70
52	E6_Aa	NovelBoundary	0	31.19	2.89	14.34	1.43	20.20	21.01	19.87	13.10	34.11	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.88	64.99	3.06	4.18
53	ER6a	ExonRegion	0	93.71	4.84	8.66	6.02	59.15	16.79	26.83	27.76	54.32	9.19	4.11	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.68	0.43	98.01	52.80	47.60
54	E6_Ab	KnownBoundary	0	244.71	2.63	15.05	7.72	54.16	26.63	11.84	36.06	61.54	15.02	2.47	0.00	0.00	0.00	0.00	0.00	0.00	2.03	0.00	0.00	106.87	37.11	12.89
55	ER6b	ExonRegion	0	90.34	3.40	7.35	6.31	49.08	20.88	21.35	47.54	70.92	8.80	1.98	0.00	0.00	0.29	0.00	0.00	0.00	5.14	0.35	0.70	91.27	43.60	48.54
56	E6_Da	KnownBoundary	0	200.48	2.70	13.48	6.19	41.94	25.72	29.59	47.65	70.83	4.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	19.15	0.00	0.00	96.43	43.78	68.21
57	ER6c	ExonRegion	0	486.13	12.49	42.47	19.17	184.30	47.37	64.07	76.97	79.62	14.61	2.61	0.22	0.19	0.12	0.00	0.00	0.14	3.51	1.85	0.22	75.92	74.60	50.61