Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-295P9.2	Gene	0	90.41	24.36	19.54	26.06	36.83	32.82	24.40	27.43	34.25	38.86	18.55	17.08	36.34	31.50	22.88	31.48	26.24	20.07	11.59	33.52	16.43	19.55	24.37
2	430832	Transcript	0	3.00	0.39	0.00	0.00	0.00	1.93	0.00	0.41	0.18	0.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.81	0.00	0.00	0.00
3	440878	Transcript	0	1.82	0.00	0.00	1.03	0.00	0.00	0.00	0.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	437446	Transcript	0	15.10	9.58	1.80	1.39	14.53	4.58	4.99	2.06	4.66	7.45	3.63	9.55	2.11	4.13	1.60	5.84	5.07	6.56	5.00	9.61	2.58	2.70	3.04
5	419851	Transcript	0	39.76	5.76	2.80	4.80	13.25	20.48	14.91	7.90	15.47	9.07	7.13	11.96	30.37	24.05	12.09	9.13	19.02	15.49	2.88	13.32	13.75	10.07	25.03
6	430721	Transcript	0	83.91	18.74	22.46	36.71	41.79	37.97	28.09	33.77	38.07	46.28	19.03	17.96	36.02	33.70	27.72	45.79	35.24	33.42	17.62	47.28	24.53	18.97	27.96
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	0.00	0.95	0.00	0.00	0.00	0.00	0.00	1.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	1.75	1.42	0.00	0.02	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00
11	E3_Da	NovelBoundary	1	96.98	102.09	70.87	45.68	93.89	99.72	120.12	82.56	63.22	153.30	133.09	250.13	119.96	142.62	148.96	95.53	165.22	104.96	52.43	104.82	60.73	83.03	57.02
12	E3a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I3	Intron	0	14.66	13.63	6.02	13.39	24.41	20.96	35.51	10.48	26.10	27.61	10.62	33.67	30.14	14.77	6.13	19.93	21.77	40.09	14.35	47.71	23.25	13.74	10.97
14	I3_SR1	SilentIntronRegion	0	12.48	12.50	6.89	16.37	32.51	24.03	46.03	7.39	25.18	26.97	11.49	44.84	45.43	13.10	2.90	21.00	20.69	26.49	15.68	54.79	16.44	14.85	10.54
15	I3_AR1	ActiveIntronRegion	0	16.27	14.56	5.54	11.63	19.42	19.25	29.08	12.65	27.07	28.42	10.21	26.80	20.55	16.07	8.33	19.49	22.79	49.53	13.69	43.72	28.03	13.21	11.42
16	E4_Aa	NovelBoundary	0	13.41	0.00	8.93	7.72	7.22	23.79	22.79	10.88	18.14	25.81	0.00	12.60	0.00	3.00	4.45	3.25	25.53	39.38	9.13	34.39	18.59	8.88	12.12
17	E4_Da	NovelBoundary	0	10.45	12.96	1.80	12.62	6.88	14.25	14.13	17.62	12.90	26.30	7.00	12.60	12.82	6.77	0.00	19.40	29.27	35.15	21.37	47.49	24.46	0.00	20.06
18	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I4	Intron	0	13.81	26.47	9.72	15.20	28.21	34.70	38.39	19.81	30.13	39.93	12.72	31.34	26.59	15.09	7.46	19.94	18.12	35.85	19.80	44.20	15.92	12.47	17.08
20	I4_SR1	SilentIntronRegion	0	6.02	11.05	4.37	11.50	20.11	34.17	28.35	12.38	22.05	27.07	11.01	16.32	13.26	15.09	5.83	15.78	14.79	32.39	17.03	39.92	17.84	9.72	14.38
21	I4_AR2	ActiveIntronRegion	0	16.17	30.33	10.27	22.66	24.20	35.13	39.84	18.52	28.27	41.96	11.36	34.55	36.26	17.20	6.84	18.89	17.40	27.94	17.57	48.48	5.86	12.59	15.34
22	I4_SR2	SilentIntronRegion	0	11.84	31.83	8.74	17.77	22.81	35.15	48.64	21.91	36.29	54.07	10.19	44.81	41.43	17.25	11.18	23.26	18.73	43.27	20.23	66.02	18.14	15.33	21.50
23	I4_AR3	ActiveIntronRegion	0	12.67	23.43	10.45	14.14	27.13	35.36	47.01	22.60	37.48	50.69	18.73	31.63	28.23	16.02	8.15	27.93	25.87	57.75	30.15	49.81	25.51	15.99	24.43
24	I4_SR3	SilentIntronRegion	0	13.42	24.08	8.77	14.72	24.45	37.14	39.48	20.27	34.31	41.04	13.46	42.64	37.44	17.31	7.78	24.04	19.29	49.99	21.96	47.99	22.04	12.30	17.28
25	I4_AR4	ActiveIntronRegion	0	14.10	43.42	8.20	14.09	32.03	30.18	47.36	20.32	23.78	32.08	7.36	44.80	22.96	14.19	7.01	11.72	17.96	12.37	18.19	37.33	6.89	10.49	10.78
26	I4_SR4	SilentIntronRegion	0	14.53	31.25	10.75	14.60	33.24	31.17	31.60	24.42	22.87	32.41	8.83	7.24	18.55	12.09	7.53	14.57	11.87	22.81	14.58	33.39	14.39	14.30	21.12
27	I4_AR6	ActiveIntronRegion	0	29.06	38.23	17.31	18.91	52.93	47.68	27.27	27.79	33.70	46.37	12.95	26.89	21.65	11.35	8.82	17.49	8.09	10.38	8.33	35.82	5.04	10.22	7.20
28	I4_SR5	SilentIntronRegion	0	13.66	21.77	11.78	9.27	31.17	24.82	21.67	13.78	22.32	19.91	8.52	26.74	15.98	10.66	5.16	11.23	12.47	22.56	9.03	27.46	12.49	7.87	13.41
29	E5_Aa	NovelBoundary	0	71.20	50.39	12.09	24.31	82.00	72.80	46.86	44.61	54.89	41.69	24.85	17.56	18.99	9.71	6.30	34.95	13.18	18.41	8.75	33.30	23.23	5.51	7.68
30	E5_Ab	NovelBoundary	1	113.43	71.90	26.97	20.98	88.20	44.35	49.33	36.47	54.66	59.07	20.58	56.72	26.30	17.31	15.08	40.25	22.16	35.40	27.77	73.70	14.89	11.63	19.38
31	ER5a	ExonRegion	0	28.68	18.44	3.59	2.77	29.06	9.17	9.04	4.11	9.33	14.91	7.27	19.11	3.23	8.12	3.20	11.68	10.13	13.13	10.00	19.22	5.17	5.24	6.08
32	ER5b	ExonRegion	0	66.70	24.03	5.16	8.41	35.63	35.39	28.54	6.47	17.36	31.82	13.67	15.52	13.00	10.56	8.70	30.53	20.61	14.73	16.79	32.77	14.20	10.33	12.63
33	E5_Da	NovelBoundary	1	17.04	65.51	10.85	21.28	79.37	50.88	26.81	33.64	33.28	49.08	17.69	43.21	6.33	17.13	4.45	23.84	13.84	14.18	13.08	61.55	14.76	11.88	6.91
34	E5a_E6a	KnownJunction	0	79.13	5.13	0.00	1.96	20.12	12.78	3.89	4.15	12.44	14.69	7.37	0.00	20.13	4.24	5.56	12.39	18.23	0.00	0.00	0.00	17.61	12.98	3.59
35	I5	Intron	0	11.55	41.44	21.99	25.98	33.63	50.19	27.28	24.69	30.31	55.97	9.39	16.05	15.30	12.85	6.01	13.19	11.58	29.24	18.77	34.58	14.47	12.40	11.71
36	I5_AR1	ActiveIntronRegion	0	9.63	37.03	17.29	24.17	31.43	47.50	24.95	26.06	29.99	57.40	8.54	16.26	14.79	10.60	4.49	14.17	12.05	33.97	18.66	37.73	15.65	12.33	12.03
37	I5_AR2	ActiveIntronRegion	0	13.15	49.41	25.78	26.19	38.20	50.90	31.74	26.63	32.62	58.55	10.58	18.72	21.28	14.72	7.97	13.34	9.95	25.11	22.19	31.18	10.80	13.56	9.90
38	I5_SR2	SilentIntronRegion	0	10.02	34.19	27.28	29.75	27.45	52.31	22.98	16.49	29.76	47.81	10.85	10.09	7.65	16.13	7.06	11.42	12.74	30.17	14.32	34.68	18.56	9.90	15.12
39	I5_AR3	ActiveIntronRegion	0	19.40	19.66	21.65	34.07	23.19	66.32	27.80	26.50	26.76	54.10	5.80	25.98	10.16	17.05	13.54	12.38	19.81	31.72	12.74	42.91	9.18	11.81	13.21
40	I5_SR3	SilentIntronRegion	0	22.75	53.66	30.08	31.47	48.18	58.78	30.23	29.49	30.34	65.32	8.53	22.71	13.77	13.47	7.80	14.81	13.71	17.09	18.33	30.19	11.11	13.98	9.20
41	I5_AR4	ActiveIntronRegion	0	17.03	61.08	15.70	20.85	37.85	60.43	43.97	24.16	15.73	39.73	4.40	9.48	14.23	10.30	1.58	3.10	8.88	6.98	14.87	22.93	13.05	14.86	8.19
42	E6_Aa	NovelBoundary	0	107.13	234.04	83.47	35.03	216.38	305.79	158.90	119.98	151.56	96.06	63.28	20.26	51.62	92.18	44.26	7.95	41.80	73.70	39.15	121.57	17.48	42.43	20.15
43	ER6a	ExonRegion	0	16.17	0.80	0.00	0.56	4.84	5.41	1.88	2.10	5.33	5.10	2.39	0.00	3.18	1.45	2.58	3.26	3.57	0.02	0.00	1.69	4.06	4.64	1.29
44	E6_Da	KnownBoundary	0	58.01	136.88	62.24	51.91	68.68	157.47	81.83	56.02	66.26	29.33	21.90	30.46	25.97	39.50	46.85	19.82	21.22	73.87	37.74	83.99	11.49	47.88	66.24
45	E6a_E7b	KnownJunction	0	16.23	0.00	0.00	0.00	0.00	11.58	0.00	0.00	1.10	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.13	0.00	0.00	0.00
46	E6a_E8a	KnownJunction	0	3.63	0.00	0.00	2.06	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER6b	ExonRegion	0	1.51	0.73	0.00	0.00	0.00	0.00	0.94	0.00	0.00	0.00	0.00	0.00	0.98	0.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.15	0.00
48	E6_Db	NovelBoundary	0	114.24	139.12	89.17	55.67	72.16	165.19	60.24	90.16	135.47	73.68	35.80	18.91	32.95	63.81	34.61	15.12	29.64	90.49	55.72	117.99	26.01	52.60	59.58
49	E7_Aa	NovelBoundary	0	178.18	32.76	10.20	8.36	51.27	65.64	22.83	29.98	40.83	30.11	14.16	11.40	67.37	28.72	20.89	31.62	57.04	43.24	4.42	34.96	24.53	40.17	44.82
50	ER7a	ExonRegion	0	39.76	5.76	2.80	4.80	13.25	20.48	14.91	7.90	15.47	9.07	7.13	11.96	30.37	24.05	12.09	9.13	19.02	15.49	2.88	13.32	13.75	10.07	25.03
51	E7_Ab	KnownBoundary	0	118.10	26.05	15.64	16.95	33.02	56.73	44.38	37.58	45.49	34.76	22.64	18.46	50.16	46.03	17.80	27.43	42.17	55.17	8.28	42.38	26.56	24.06	50.88
52	ER7b	ExonRegion	0	111.29	19.61	15.02	13.22	37.82	43.90	20.90	27.06	44.64	34.67	21.63	10.63	33.22	37.25	28.36	33.67	38.99	28.23	11.12	31.66	23.18	15.07	24.17
53	E7_Da	NovelBoundary	0	32.23	48.61	7.24	11.85	36.33	43.27	43.15	48.51	35.59	21.09	17.90	6.00	25.65	31.55	14.46	19.40	56.10	55.84	17.98	32.53	22.24	24.68	32.52
54	E7a_E8a	KnownJunction	0	154.32	3.35	6.06	5.26	40.41	9.82	4.24	11.58	18.46	24.36	24.85	0.00	0.00	16.60	4.45	25.12	0.00	2.40	4.80	3.13	9.20	2.63	12.12
55	Ix	Intron	0	39.36	38.21	13.37	9.42	32.43	30.88	26.82	27.86	25.88	19.59	9.74	18.44	65.21	25.97	9.04	7.98	22.82	23.09	11.66	33.92	9.86	20.00	21.02
56	Ix_SR1	SilentIntronRegion	0	20.87	19.67	8.67	5.36	24.04	28.09	23.98	22.23	17.51	16.28	9.18	19.23	62.65	24.06	10.80	7.32	18.58	13.94	5.04	21.70	4.65	12.46	8.26
57	Ix_AR1	ActiveIntronRegion	0	55.59	54.48	17.51	12.99	39.87	33.47	29.43	32.90	33.28	22.56	10.29	17.86	67.82	27.77	7.56	8.60	26.63	31.15	17.46	44.70	14.42	26.65	32.17
58	E8_Aa	NovelBoundary	1	55.49	43.48	33.71	19.38	82.77	72.86	52.42	39.88	49.71	33.23	13.64	25.06	101.13	52.45	13.72	11.28	67.32	26.45	26.92	56.76	14.83	38.70	28.60
59	ER8a	ExonRegion	0	171.09	51.26	20.49	13.61	53.70	52.70	34.01	48.48	44.58	50.24	30.57	27.07	61.71	37.91	22.99	43.63	34.43	19.77	13.85	42.66	14.96	31.30	27.72
60	E8_Da	NovelBoundary	1	66.38	101.50	24.13	7.42	4.33	29.76	51.27	53.89	42.33	31.80	24.59	17.86	125.80	39.32	14.71	4.36	47.41	36.06	18.73	83.16	9.20	32.76	16.05
61	E8a_E9b	KnownJunction	0	178.03	5.53	6.92	5.23	11.21	11.30	3.97	26.62	15.48	22.78	6.84	18.46	0.00	7.36	4.45	39.22	4.77	0.00	0.00	3.00	6.12	5.94	8.11
62	Ix	Intron	0	24.04	26.99	9.91	13.27	36.25	33.47	30.05	25.57	34.68	25.22	18.82	19.85	80.78	30.17	11.08	19.98	35.73	26.07	10.43	43.57	16.29	19.21	21.26
63	Ix_AR1	ActiveIntronRegion	0	24.93	31.02	9.29	11.89	36.36	35.29	29.72	28.15	38.24	24.25	19.45	21.87	95.11	29.72	9.83	18.30	35.02	22.99	8.75	43.25	15.39	20.17	18.29
64	Ix_AR2	ActiveIntronRegion	0	30.54	37.57	19.20	12.98	46.00	46.19	48.17	10.21	32.00	18.08	18.50	20.00	79.06	37.35	17.96	9.06	53.91	45.40	9.10	51.57	23.93	23.51	21.26
65	Ix_SR1	SilentIntronRegion	0	41.57	34.86	18.99	13.68	71.48	66.15	51.45	20.74	46.10	24.29	24.37	35.10	97.65	64.91	11.19	32.37	72.97	56.62	19.00	79.86	30.06	28.80	44.36
66	Ix_AR3	ActiveIntronRegion	0	17.30	22.31	7.05	11.89	25.30	24.11	24.38	17.18	29.48	25.07	17.07	11.64	51.64	24.09	10.63	25.72	34.95	34.06	10.03	45.56	19.81	21.29	27.22
67	Ix_SR2	SilentIntronRegion	0	25.97	12.88	9.13	15.18	26.35	36.99	33.43	21.66	34.35	29.26	17.40	17.28	51.17	37.12	12.96	31.81	30.27	33.49	14.35	43.32	14.83	7.70	25.48
68	Ix_AR4	ActiveIntronRegion	0	18.73	19.62	9.40	12.55	31.68	27.66	25.55	23.79	29.22	26.98	20.58	17.27	69.61	30.86	12.49	15.47	42.32	28.75	13.78	36.43	15.55	12.60	28.31
69	Ix_AR5	ActiveIntronRegion	0	38.58	26.27	20.23	27.18	67.92	44.43	47.66	32.10	28.87	28.39	14.72	26.96	71.22	37.19	17.25	22.61	26.65	17.39	14.69	50.57	15.25	24.51	12.20
70	Ix	Intron	0	36.48	18.55	14.41	19.95	29.10	30.32	30.71	22.25	23.81	28.93	16.95	18.38	61.91	27.06	15.71	20.98	31.99	20.15	11.31	36.67	14.68	13.16	24.60
71	Ix_AR1	ActiveIntronRegion	0	34.69	22.56	17.82	21.54	37.94	33.98	34.80	23.80	31.39	31.50	20.00	23.56	92.41	30.33	15.01	18.75	32.96	21.94	9.36	42.88	12.33	15.51	27.21
72	Ix_SR1	SilentIntronRegion	0	39.12	13.04	9.73	17.82	16.90	25.34	25.15	20.19	13.34	25.46	12.78	11.24	19.66	22.59	16.74	24.18	30.78	17.74	14.08	28.16	18.02	9.94	21.05
73	E9_Aa	NovelBoundary	0	80.83	39.93	14.69	34.49	90.58	51.22	70.84	46.09	25.75	43.49	27.43	7.65	28.41	29.43	29.05	36.40	54.32	46.51	30.40	54.14	27.80	12.31	32.52
74	ER9a	ExonRegion	0	83.91	18.74	22.46	36.71	41.79	37.97	28.09	33.77	38.07	46.28	19.03	17.96	36.02	33.70	27.72	45.79	35.24	33.42	17.62	47.28	24.53	18.97	27.96
75	E9_Ab	KnownBoundary	1	119.58	30.98	36.66	51.68	40.66	73.25	48.27	51.75	43.26	65.38	22.64	5.85	26.13	67.40	15.58	85.79	56.94	45.06	21.27	51.84	26.93	8.02	38.93
76	ER9b	ExonRegion	0	150.13	20.97	31.58	39.86	48.42	76.18	45.05	50.55	38.37	71.64	34.77	28.79	21.49	41.46	33.17	56.15	52.15	31.59	10.20	48.59	23.38	13.77	30.36
77	E9_Da	NovelBoundary	1	23.26	37.43	68.45	18.51	33.96	84.95	35.82	66.91	78.88	71.35	43.06	36.46	121.91	98.89	51.30	0.00	91.44	93.81	21.93	68.65	37.50	75.32	57.79
78	E9a_E10a	KnownJunction	0	102.39	15.98	14.67	13.85	99.58	69.34	15.59	25.88	28.79	53.37	34.06	45.01	6.01	21.25	45.86	37.34	23.38	7.09	0.00	14.51	19.58	16.66	7.68
79	Ix	Intron	1	43.63	32.91	25.60	28.36	32.55	27.25	23.25	30.72	42.91	31.55	13.55	10.10	41.93	38.55	15.11	7.30	29.08	36.94	11.27	41.95	17.29	33.46	26.05
80	Ix_AR1	ActiveIntronRegion	0	4.81	6.29	3.34	2.60	2.68	5.17	2.17	4.87	5.39	1.25	1.76	0.00	2.56	4.58	10.55	2.43	0.30	7.56	1.74	4.26	5.61	6.82	2.94
81	Ix_SR1	SilentIntronRegion	0	22.79	17.75	11.30	14.25	9.90	18.02	12.02	22.48	38.65	31.36	12.17	4.71	19.65	27.34	15.27	5.51	26.72	43.13	7.07	37.84	19.78	32.13	25.84
82	Ix_AR2	ActiveIntronRegion	0	44.93	37.11	31.54	30.04	40.54	27.91	26.05	37.40	46.61	32.28	15.34	10.91	41.55	42.97	14.94	8.25	32.42	41.50	13.05	44.11	20.44	34.78	26.77
83	Ix_SR2	SilentIntronRegion	0	61.54	36.81	23.60	38.20	32.81	35.39	27.08	21.61	39.44	32.06	10.79	13.42	65.76	38.92	15.94	6.69	24.17	21.27	10.81	42.56	7.37	33.19	26.10
84	E10_Aa	NovelBoundary	1	51.64	40.85	22.18	31.60	83.79	35.72	70.70	30.81	40.13	44.43	9.95	6.30	115.09	43.15	14.09	4.36	13.93	23.42	9.32	82.33	10.56	17.27	21.08
85	ER10a	ExonRegion	0	200.68	53.66	48.16	63.25	77.73	56.69	48.59	54.34	76.38	84.51	39.58	36.95	72.23	69.88	51.13	59.49	45.01	32.26	22.05	61.46	29.11	48.10	58.18
86	E10_Da	KnownBoundary	0	91.28	70.78	35.24	36.39	39.30	25.33	30.16	44.24	47.60	49.69	29.17	19.06	87.01	50.97	24.60	25.21	11.50	30.59	13.08	54.71	10.38	28.53	26.38
87	ER10b	ExonRegion	1	56.11	49.19	21.62	27.13	34.60	29.98	28.22	26.75	31.60	29.25	15.39	21.61	91.61	44.93	19.76	9.12	18.56	12.45	7.45	35.79	8.68	20.80	17.47