Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-142M10.1 Gene 0 5.30 9.83 6.38 2.36 12.69 2.95 20.73 9.22 16.30 6.12 18.85 1.28 3.11 5.39 1.51 0.00 0.00 4.53 0.00 16.75 0.20 0.75 8.68 2 446193 Transcript 0 2.07 4.48 2.99 0.93 5.73 1.44 9.43 4.20 7.07 2.57 7.12 0.43 2.00 2.41 0.56 0.00 0.00 2.27 0.00 7.24 0.13 0.31 4.66 3 ER1a ExonRegion 0 3.03 12.20 8.90 1.16 15.33 4.73 12.98 11.07 16.26 5.39 5.00 0.00 3.32 6.22 0.59 0.00 0.00 1.97 0.00 13.44 0.63 0.60 8.43 4 E1_Da NovelBoundary 0 3.48 12.76 5.50 5.16 8.15 0.00 43.63 23.95 18.14 5.67 9.53 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 24.22 0.00 0.00 8.45 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 7.23 9.48 10.49 4.13 12.40 2.53 20.87 28.92 26.28 9.58 6.71 0.45 7.55 5.08 1.60 0.28 0.00 4.75 1.12 11.05 0.23 1.17 13.08 7 Ix_SR1 SilentIntronRegion 0 4.84 9.87 9.03 3.16 12.74 1.60 14.79 19.81 20.90 4.85 5.04 0.40 3.62 3.69 1.67 0.00 0.00 2.52 1.60 7.21 0.00 1.05 10.35 8 Ix_AR1 ActiveIntronRegion 0 11.73 6.76 8.89 5.83 11.22 2.88 15.01 30.18 26.93 10.58 8.14 0.00 8.71 7.65 2.26 0.66 0.00 11.65 2.11 12.73 0.97 1.84 17.52 9 Ix_AR2 ActiveIntronRegion 0 8.51 6.14 4.60 2.07 6.82 5.45 15.90 18.29 9.99 6.90 5.82 0.00 6.05 1.85 0.00 0.00 0.00 6.76 6.47 5.30 1.12 1.06 11.98 10 Ix_SR2 SilentIntronRegion 0 8.89 11.43 13.87 6.14 12.39 2.04 22.40 32.76 32.96 10.55 6.69 0.22 7.24 6.71 1.62 0.18 0.00 6.76 0.79 12.09 0.27 1.29 15.78 11 Ix_AR3 ActiveIntronRegion 0 22.31 18.67 23.59 10.36 31.23 1.66 36.76 56.34 42.35 18.60 11.61 0.81 8.44 6.27 2.51 0.00 0.00 4.37 1.81 14.71 0.50 1.89 21.63 12 Ix_SR3 SilentIntronRegion 0 4.39 5.04 6.37 2.43 10.24 2.61 19.38 20.03 19.67 6.15 5.38 0.90 5.30 3.99 1.21 0.78 0.00 3.77 0.13 5.65 0.00 0.47 8.82 13 Ix_AR4 ActiveIntronRegion 0 9.74 2.03 5.70 0.20 2.68 0.00 10.99 20.91 15.93 7.17 9.18 0.00 11.49 9.50 0.00 0.00 0.00 7.39 9.56 11.91 1.65 0.00 23.64 14 Ix_SR4 SilentIntronRegion 0 5.84 4.01 11.59 1.36 1.86 0.00 12.16 29.96 23.77 13.24 8.67 0.00 7.11 8.32 0.00 2.34 0.00 7.39 8.69 17.54 2.20 1.45 25.09 15 Ix_AR5 ActiveIntronRegion 0 2.28 2.46 16.09 3.67 4.22 0.00 25.08 36.40 25.06 16.85 9.85 0.00 12.27 4.68 0.00 1.43 0.00 6.08 2.33 15.14 0.13 1.64 17.51 16 Ix_SR5 SilentIntronRegion 0 8.33 5.08 16.24 6.81 14.38 0.00 28.96 38.46 20.84 16.99 14.50 2.44 9.38 2.03 0.00 0.00 0.00 5.54 6.37 15.43 0.14 2.08 15.60 17 Ix_AR6 ActiveIntronRegion 0 4.72 9.48 9.86 3.29 8.18 4.02 25.75 38.08 31.28 15.56 7.40 0.23 12.90 6.14 1.82 0.00 0.00 7.01 0.42 19.44 0.53 1.60 16.18 18 Ix_SR6 SilentIntronRegion 0 5.37 12.55 9.77 3.09 9.60 3.90 19.62 31.54 28.33 11.08 7.53 0.00 14.14 5.31 1.73 0.00 0.00 2.65 0.92 17.80 0.00 1.61 11.25 19 E2_Aa NovelBoundary 0 7.56 5.99 16.85 2.93 26.66 2.44 28.75 36.23 26.50 8.41 8.95 0.00 6.82 6.89 0.00 0.00 0.00 15.71 0.00 25.82 2.72 0.00 17.16 20 ER2a ExonRegion 0 0.00 0.12 0.02 0.16 0.10 0.00 7.33 0.30 0.31 0.02 1.90 0.00 3.79 0.06 0.00 0.00 0.00 3.30 0.00 2.05 0.00 0.00 5.59 21 E2_Da NovelBoundary 0 6.96 14.41 15.29 0.00 7.81 0.00 17.89 47.15 60.47 14.08 28.17 0.00 13.47 12.01 4.45 0.00 0.00 3.86 0.00 17.45 2.97 0.00 18.18 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 Ix Intron 0 5.22 8.00 6.61 2.42 9.46 2.08 18.84 18.24 18.92 9.08 10.41 0.21 5.59 5.68 1.46 0.18 0.00 5.62 1.27 12.47 0.26 1.16 13.08 24 Ix_SR1 SilentIntronRegion 0 6.46 7.40 6.70 2.17 8.88 2.01 15.60 21.52 19.62 8.38 9.81 0.12 5.38 6.06 1.54 0.20 0.00 6.07 0.78 13.98 0.23 1.28 14.72 25 Ix_AR1 ActiveIntronRegion 0 4.09 6.34 5.47 2.32 10.54 2.02 24.79 14.79 14.93 11.82 9.82 0.35 4.15 5.57 1.10 0.00 0.00 6.44 2.24 13.15 0.65 0.46 14.30 26 Ix_SR2 SilentIntronRegion 0 2.96 12.33 8.82 3.92 11.22 2.35 23.94 14.77 24.76 10.19 12.07 0.42 9.26 5.05 1.53 0.35 0.00 4.19 2.19 8.93 0.00 1.46 9.13 27 Ix_AR2 ActiveIntronRegion 0 3.25 6.99 2.80 0.78 6.16 2.11 15.23 6.91 7.75 2.62 14.05 0.00 1.48 4.03 1.90 0.00 0.00 2.13 0.00 4.88 0.00 1.60 3.38 28 E3_Aa NovelBoundary 0 3.70 12.37 4.55 5.96 0.00 0.00 26.85 20.04 26.59 7.41 18.53 0.00 6.17 9.01 0.00 0.00 0.00 2.40 0.00 26.72 0.00 3.12 11.87 29 ER3a ExonRegion 0 7.30 10.07 6.03 3.33 13.23 2.48 26.84 9.61 18.77 7.43 28.70 2.14 2.90 5.78 2.23 0.00 0.00 6.05 0.00 20.74 0.00 0.94 9.28