Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-124N14.1 Gene 0 58.37 1.92 1.93 2.91 32.33 4.78 12.69 13.42 4.52 1.81 68.77 22.34 15.04 20.44 16.77 10.21 14.83 2.09 3.25 1.21 4.90 8.81 2.22 2 437232 Transcript 0 31.86 0.47 0.73 1.33 13.48 2.32 5.23 4.47 1.37 0.32 29.31 9.87 7.05 13.28 9.87 3.37 6.31 1.42 1.91 0.21 2.86 3.66 1.85 3 IG25 Intergenic 0 7.99 1.38 0.34 0.38 4.44 2.08 5.45 3.60 0.56 0.45 10.72 8.90 4.03 8.74 4.62 3.03 4.11 1.98 2.77 1.69 2.49 1.89 0.22 4 IG25_AR1 ActiveIntergenicRegion 0 5.78 1.93 0.00 0.64 3.29 0.00 4.83 4.94 0.00 0.05 7.92 6.34 3.57 8.42 1.10 2.77 2.67 0.29 1.51 0.34 1.39 1.32 0.00 5 IG25_SR1 SilentIntergenicRegion 0 8.71 1.21 0.45 0.30 4.82 2.73 5.65 3.18 0.73 0.58 11.63 9.73 4.18 8.86 5.73 3.12 4.57 2.51 3.17 2.12 2.85 2.07 0.29 6 ER1a ExonRegion 0 2.26 0.00 0.00 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.31 0.00 0.00 0.38 2.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 7 E1_Da NovelBoundary 0 5.93 0.00 0.00 1.50 6.54 0.00 1.94 4.48 0.00 0.00 16.37 0.00 0.00 10.54 10.01 4.36 0.00 4.93 0.00 2.49 7.91 0.00 0.00 8 E1a_E2a KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 I1 Intron 0 12.24 0.80 0.36 0.82 8.41 1.59 6.16 4.33 1.19 0.46 11.32 9.29 13.84 7.56 3.57 5.15 3.00 1.38 1.35 1.56 1.18 2.04 1.61 10 I1_SR1 SilentIntronRegion 0 12.22 0.77 0.39 0.81 8.37 1.34 6.13 4.42 1.12 0.43 11.49 8.82 14.07 7.40 3.55 5.11 3.03 1.43 1.43 1.58 1.25 2.01 1.62 11 I1_AR1 ActiveIntronRegion 0 12.59 1.16 0.00 0.88 8.99 4.81 6.59 3.14 2.13 0.83 9.27 15.47 10.90 9.66 3.72 5.78 2.55 0.67 0.26 1.23 0.32 2.41 1.49 12 E2_Aa NovelBoundary 0 20.15 5.59 0.00 0.00 0.00 0.00 3.67 5.91 1.79 0.00 13.79 0.00 0.00 20.19 4.45 15.64 9.44 1.66 0.00 5.50 0.00 8.88 0.00 13 ER2a ExonRegion 0 19.76 0.00 0.00 1.29 4.63 1.26 5.47 0.00 0.00 0.00 10.40 3.16 2.66 15.87 5.25 0.00 2.41 0.00 0.00 0.00 1.58 1.44 1.94 14 E2_Da NovelBoundary 0 26.15 0.00 0.00 3.33 7.72 2.84 6.76 9.20 0.00 0.00 2.53 6.30 6.82 12.89 4.45 4.36 0.00 1.53 0.00 0.00 0.00 3.00 3.50 15 E2a_E3a KnownJunction 0 6.89 0.00 0.00 1.23 4.33 0.00 0.00 0.00 0.00 0.00 5.32 0.00 0.00 0.00 5.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I2 Intron 0 28.55 2.16 0.00 1.39 9.73 1.81 4.92 3.32 1.81 0.91 14.06 6.54 6.42 6.60 4.42 5.86 3.25 1.95 1.69 2.58 2.34 2.05 1.56 17 I2_SR1 SilentIntronRegion 0 22.70 1.13 0.00 0.88 7.22 1.91 4.94 3.25 1.25 0.62 12.72 5.74 5.60 7.38 4.78 7.38 2.22 2.41 1.58 2.43 2.12 2.20 1.58 18 I2_AR1 ActiveIntronRegion 0 44.25 4.50 0.00 2.82 14.36 1.93 7.08 3.87 3.72 0.87 17.05 10.93 8.35 4.89 4.76 5.00 5.01 1.61 2.60 4.32 2.43 2.55 1.56 19 I2_AR2 ActiveIntronRegion 1 27.87 2.82 0.00 1.18 13.57 1.06 0.70 2.62 0.98 2.45 15.25 2.19 6.95 6.14 2.06 0.00 5.13 0.31 0.46 0.00 3.35 0.38 1.45 20 E3_Aa NovelBoundary 0 54.38 12.89 0.00 1.37 11.63 7.95 12.28 5.22 3.99 3.87 4.84 0.00 13.64 7.65 20.52 16.83 3.93 0.00 0.00 3.00 0.00 6.25 4.35 21 ER3a ExonRegion 0 36.47 1.07 1.55 1.69 16.43 3.11 6.96 4.75 2.61 0.07 46.93 8.82 10.12 24.06 19.88 3.69 11.19 3.25 0.88 0.00 7.63 1.97 1.58 22 E3a_E4a KnownJunction 0 89.50 0.00 1.36 1.83 32.09 6.53 9.85 10.88 1.79 0.00 64.91 31.36 19.64 29.08 18.54 8.03 14.03 4.52 8.66 0.00 5.75 11.94 6.91 23 I3_AR2 ActiveIntronRegion 0 13.26 0.00 0.00 0.00 4.44 0.00 1.36 4.73 0.00 0.00 8.19 3.53 0.00 2.05 1.76 0.00 0.00 1.85 0.00 0.00 4.00 2.08 1.62 24 ER4a ExonRegion 0 65.15 2.20 2.17 3.25 36.92 5.35 14.20 15.64 5.17 2.16 77.32 25.75 16.90 21.16 17.77 11.90 16.56 2.19 3.81 1.45 5.05 10.29 2.38