Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIN Gene 0 39.20 39.15 25.30 33.65 49.69 43.64 44.54 40.27 33.74 55.81 39.59 65.38 44.40 46.71 43.97 43.61 37.80 20.64 26.33 36.51 19.19 32.81 20.57 2 379562 Transcript 0 60.53 39.77 29.86 36.43 68.44 55.01 47.06 50.48 45.51 65.67 74.63 81.99 51.20 96.22 78.52 99.34 75.97 47.65 52.01 63.71 47.30 46.66 40.98 3 460089 Transcript 0 0.25 2.19 1.30 1.20 5.90 0.65 6.67 0.92 1.75 0.84 2.38 2.96 8.34 3.14 1.70 2.45 6.62 0.98 0.01 3.28 1.04 1.98 1.04 4 463666 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 471320 Transcript 0 9.12 12.83 4.29 0.99 8.67 2.56 28.85 13.71 5.09 11.84 2.06 4.44 10.17 3.85 4.48 8.48 4.22 3.81 2.16 11.51 1.47 4.79 3.72 6 498098 Transcript 0 17.04 20.51 5.25 18.27 28.83 19.41 14.49 11.31 16.37 16.66 13.00 16.59 7.24 10.96 13.94 12.48 10.78 9.85 6.00 19.95 2.68 4.73 7.98 7 ER1a ExonRegion 1 58.88 36.15 19.83 19.53 46.03 76.75 42.94 31.12 25.59 47.99 70.53 16.57 10.65 37.93 45.54 90.34 67.99 58.06 39.33 46.56 70.76 24.65 37.11 8 E1a_E2a KnownJunction 1 3.70 12.76 31.93 16.85 4.33 16.24 4.33 41.16 20.28 52.33 118.61 5.70 31.17 38.50 10.14 4.36 116.88 15.67 16.38 62.45 111.88 15.19 21.17 9 E1a_E3a NovelJunction 0 0.00 0.00 4.35 3.60 0.00 0.00 4.06 0.00 7.96 5.99 26.74 0.00 0.00 7.42 0.00 4.27 29.36 4.73 0.00 8.44 14.70 3.00 4.27 10 ER2a ExonRegion 1 17.65 16.48 27.54 39.77 23.26 11.06 12.56 58.08 45.89 74.92 95.36 39.92 19.50 83.60 88.50 143.91 76.27 83.36 66.89 62.33 61.17 47.02 62.69 11 E2a_E3a KnownJunction 1 43.64 26.05 20.43 38.42 67.06 10.85 25.57 56.31 46.87 59.02 60.38 31.66 21.26 77.99 101.98 206.61 38.90 81.12 48.85 69.41 31.07 39.92 83.31 12 ER3a ExonRegion 0 31.75 22.32 23.42 33.48 63.12 39.51 30.81 58.26 52.24 55.00 56.45 65.83 39.65 75.37 65.74 130.84 63.69 70.76 37.50 76.89 40.42 36.56 58.27 13 E3a_E4a KnownJunction 0 43.64 31.38 31.58 35.23 87.95 92.67 44.30 46.50 45.40 42.68 51.22 72.47 66.23 91.82 58.35 95.10 75.27 40.50 31.53 97.92 28.23 44.46 29.36 14 E4_Aa NovelBoundary 0 13.63 0.00 4.14 1.43 0.00 0.00 2.03 1.89 0.00 6.10 0.00 0.00 6.17 0.00 5.93 0.00 4.77 0.00 0.00 2.75 0.00 0.00 12.46 15 ER4a ExonRegion 0 63.99 53.12 39.32 42.59 69.70 106.79 79.24 50.13 48.90 84.06 76.22 71.24 57.08 94.45 79.09 70.73 77.66 52.50 42.42 62.83 58.12 37.22 35.55 16 E4a_E5a KnownJunction 1 131.13 90.90 17.44 52.14 91.26 69.22 44.25 56.48 47.02 78.11 60.12 116.44 32.14 121.26 122.50 89.81 101.45 46.26 35.01 57.85 66.72 32.94 20.15 17 ER5a ExonRegion 0 101.03 71.45 44.30 49.32 87.34 66.50 75.02 63.72 63.68 86.14 79.94 106.64 64.55 121.32 106.69 111.24 94.38 47.29 62.43 73.37 51.05 55.01 46.66 18 E5_Da NovelBoundary 1 7.33 2.96 7.21 9.82 11.80 2.90 5.56 15.07 18.14 8.97 2.68 6.30 28.73 0.00 5.81 3.25 3.65 2.24 3.67 12.53 0.00 0.00 7.34 19 E5a_E6a KnownJunction 0 126.17 20.00 36.25 48.51 98.81 79.16 71.06 60.30 63.54 59.47 61.02 173.16 113.95 131.67 112.49 91.60 76.95 43.44 73.13 62.13 51.71 62.95 39.44 20 E6_Aa NovelBoundary 0 9.26 12.63 9.37 8.86 0.00 0.00 10.38 9.49 15.45 9.46 5.37 0.00 0.00 0.00 4.45 3.50 4.77 0.00 0.00 2.88 0.00 0.00 0.00 21 ER6a ExonRegion 0 77.40 39.72 34.91 39.33 80.27 63.21 63.50 51.96 55.96 73.40 83.11 156.92 94.18 144.25 76.02 114.52 87.98 44.95 76.25 58.75 38.36 68.37 54.42 22 E6a_E7a KnownJunction 0 74.61 47.89 39.53 30.27 104.58 55.42 63.86 49.99 38.14 77.95 113.98 144.20 52.27 164.05 97.66 115.18 93.03 34.74 84.14 64.30 25.14 83.58 35.60 23 E7_Ab NovelBoundary 0 48.08 48.35 29.66 26.07 98.22 41.34 78.87 41.81 42.22 59.10 63.38 52.67 86.36 71.05 86.16 66.31 40.95 23.92 78.78 49.47 10.87 76.66 26.21 24 ER7a ExonRegion 0 56.99 52.29 38.16 31.54 100.72 52.79 68.18 54.32 52.93 82.58 108.79 114.11 81.07 153.60 123.30 111.67 82.52 42.63 101.02 68.69 25.50 89.29 43.00 25 ER7b ExonRegion 0 55.03 64.17 42.94 32.10 93.37 49.71 64.00 60.31 52.16 88.24 109.60 129.52 102.88 136.67 114.14 91.95 94.67 36.99 84.04 59.21 46.79 76.82 50.55 26 E7_Da NovelBoundary 0 10.45 9.21 0.00 5.89 8.66 0.00 10.38 15.40 4.28 11.66 2.53 6.30 0.00 0.00 0.00 4.27 0.00 0.00 11.67 2.43 5.93 0.00 7.77 27 E7a_E8a KnownJunction 0 57.71 80.51 42.43 32.43 68.34 37.42 73.27 69.21 52.55 92.19 99.81 131.89 87.33 107.60 89.38 73.91 107.81 35.82 51.39 60.53 58.81 60.25 33.12 28 E8_Aa NovelBoundary 0 3.19 2.70 1.74 18.61 11.71 4.71 24.95 10.97 5.67 14.18 4.05 5.85 0.00 0.00 0.00 0.00 11.59 2.57 0.00 0.00 6.30 5.57 4.35 29 ER8a ExonRegion 0 78.20 67.22 42.66 45.90 94.62 88.04 83.62 69.90 55.04 84.54 86.03 145.34 75.83 107.52 82.89 70.42 80.69 34.23 45.35 51.67 40.46 67.36 45.99 30 E8_Da NovelBoundary 0 26.30 14.41 4.73 10.72 7.13 0.00 23.41 33.23 13.40 16.82 4.79 5.55 6.82 0.00 9.52 3.33 22.91 14.09 17.32 43.91 11.98 10.78 7.51 31 E8a_E9c KnownJunction 0 273.01 165.10 69.01 67.39 148.39 174.56 159.21 79.11 71.76 97.27 83.86 196.71 140.58 177.17 166.02 115.18 83.87 28.56 82.54 54.65 49.85 91.42 68.72 32 I8_AR1 ActiveIntronRegion 0 5.85 11.25 1.68 1.25 11.51 3.38 25.63 15.83 5.09 7.88 2.38 6.78 8.14 2.41 6.40 6.39 8.11 9.61 8.81 12.42 0.68 3.20 5.41 33 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E9_Da NovelBoundary 0 14.22 3.35 0.00 0.00 8.40 0.00 29.46 14.29 3.30 2.77 2.58 0.00 0.00 0.00 10.75 3.93 9.54 0.00 4.80 12.21 2.90 0.00 4.01 35 E9a_E9c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER9b ExonRegion 0 2.02 0.80 0.00 0.12 0.12 0.00 11.92 0.68 1.13 0.50 0.08 0.00 0.41 0.49 9.59 2.20 6.17 0.00 3.05 4.53 0.57 0.27 2.04 37 ER9c ExonRegion 0 9.12 12.83 4.29 0.99 8.67 2.56 28.85 13.71 5.09 11.84 2.06 4.44 10.17 3.85 4.48 8.48 4.22 3.81 2.16 11.51 1.47 4.79 3.72 38 E9_Ac KnownBoundary 0 3.33 13.29 5.91 3.33 7.47 0.00 59.00 4.48 4.60 14.02 0.00 6.30 8.12 4.94 0.00 4.36 7.85 6.30 0.00 8.50 2.66 3.12 4.35 39 ER9d ExonRegion 0 114.42 106.32 54.09 62.80 111.42 95.61 121.06 88.36 64.72 108.36 80.06 186.95 144.36 138.31 147.67 101.94 82.19 23.43 77.91 45.53 27.85 91.17 57.38 40 E9b_E10a KnownJunction 0 51.12 69.00 40.27 62.33 106.88 71.66 118.36 104.41 46.06 99.42 87.02 164.30 182.78 123.02 128.19 71.61 40.21 10.78 48.94 31.77 7.85 61.66 43.45 41 ER10a ExonRegion 0 60.00 69.08 52.62 65.06 117.27 79.52 101.91 89.90 53.45 97.07 78.74 197.27 104.68 103.40 85.57 50.18 60.23 14.81 30.42 43.02 15.94 70.63 36.94 42 E10a_E11a KnownJunction 0 78.24 91.89 70.96 69.02 161.21 63.32 124.67 78.04 66.09 98.34 101.03 180.66 106.32 109.72 93.95 56.74 52.36 14.05 31.53 31.51 9.39 103.97 11.95 43 ER11a ExonRegion 0 77.55 61.76 62.71 80.70 105.34 77.28 77.39 98.78 60.95 107.53 95.62 188.33 111.39 100.27 100.30 62.80 72.62 24.06 53.64 58.02 17.76 83.34 29.13 44 E11_Da NovelBoundary 0 3.78 3.29 1.71 7.62 0.00 0.00 13.07 9.57 3.88 7.58 2.58 12.00 20.13 7.42 8.90 20.59 4.77 2.20 4.52 0.00 0.00 5.82 0.00 45 E11a_E12a KnownJunction 0 0.00 3.09 0.00 0.00 8.66 0.00 4.24 0.00 0.00 0.00 2.63 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 E11a_E13a KnownJunction 0 103.20 61.77 56.21 56.47 68.59 104.77 103.96 94.55 50.84 92.54 76.91 186.51 140.58 83.35 109.90 43.49 42.08 11.86 30.78 43.85 15.26 78.56 19.63 47 E12_Aa NovelBoundary 0 10.52 3.22 1.30 5.76 3.57 23.79 18.64 4.52 3.50 4.89 0.00 6.30 6.17 0.00 0.00 3.42 9.54 0.00 0.00 8.50 0.00 5.39 3.84 48 ER12a ExonRegion 1 0.50 1.30 2.60 2.41 3.14 1.30 9.10 1.83 3.49 1.68 2.13 5.92 16.69 3.81 3.40 4.91 13.25 1.97 0.01 6.56 2.07 3.95 2.09 49 E12_Da NovelBoundary 1 7.56 0.00 1.51 4.36 4.16 2.61 7.38 2.42 9.46 9.75 0.00 0.00 26.78 12.07 4.94 12.48 18.14 0.00 0.00 11.38 0.00 3.12 0.00 50 I12 Intron 0 3.11 1.79 2.68 3.58 7.08 3.50 5.25 6.44 3.79 5.28 0.28 6.51 15.41 1.99 2.88 5.68 0.49 1.08 0.94 4.38 0.32 2.45 1.73 51 I12_AR1 ActiveIntronRegion 1 1.66 2.07 1.38 2.39 6.27 4.37 2.31 4.86 4.58 5.03 0.00 11.88 18.52 0.87 3.62 4.50 1.44 1.45 1.39 4.20 0.96 3.83 1.61 52 E13_Aa NovelBoundary 1 0.00 3.35 4.38 8.79 15.70 0.00 9.72 8.83 6.37 11.52 0.00 0.00 22.89 2.12 4.45 11.62 0.00 1.91 3.67 10.74 0.00 0.00 6.91 53 ER13a ExonRegion 0 66.03 78.79 56.99 59.78 88.54 62.02 78.86 97.75 58.06 105.81 83.34 204.94 93.75 91.38 79.51 55.62 70.69 13.43 42.10 52.24 22.43 84.48 24.42 54 E13_Da NovelBoundary 0 3.33 11.91 4.76 5.03 11.29 9.26 26.41 1.73 11.05 2.95 2.26 20.41 20.45 4.47 0.00 8.72 16.36 0.00 0.00 28.63 2.59 7.72 3.33 55 E13a_E14a KnownJunction 0 72.46 44.47 39.95 45.75 86.93 46.11 66.55 74.18 46.50 105.65 38.64 115.54 81.81 96.65 84.68 32.13 58.81 4.19 25.04 53.31 23.48 59.46 15.37 56 E13a_E15a KnownJunction 0 3.41 6.71 0.00 6.59 12.05 10.85 1.77 1.60 5.73 1.02 5.00 12.60 0.00 7.12 4.45 0.00 12.90 0.00 0.00 15.15 0.00 0.00 6.83 57 I13_AR2 ActiveIntronRegion 0 5.05 10.31 2.18 9.09 9.58 8.20 12.24 9.22 9.91 6.63 3.46 5.16 10.86 4.79 4.28 4.43 4.92 2.46 1.90 12.06 1.31 8.70 2.63 58 E14_Aa NovelBoundary 0 15.41 30.39 9.76 15.95 21.65 7.33 41.42 17.50 6.92 18.08 7.79 0.00 20.29 2.47 4.45 0.00 0.00 0.00 0.00 8.37 0.00 6.12 0.00 59 ER14a ExonRegion 0 33.15 41.71 39.79 41.45 50.68 42.40 45.45 49.17 38.99 77.93 33.72 104.54 66.18 43.43 55.35 28.22 27.97 6.94 15.96 30.42 7.71 50.46 14.56 60 E14_Da KnownBoundary 1 54.53 53.28 34.77 38.76 49.92 46.45 50.35 30.19 25.23 27.51 14.79 90.03 50.00 43.26 14.96 14.27 27.30 6.05 21.55 11.70 3.15 30.00 8.28 61 E14_Db KnownBoundary 1 20.82 53.54 4.52 18.81 36.08 57.86 36.74 16.35 19.73 27.94 0.00 38.71 20.45 9.54 4.94 4.19 0.00 4.15 0.00 39.12 3.15 17.88 0.00 62 ER14b ExonRegion 1 38.10 51.90 22.12 34.66 42.81 52.48 45.83 28.23 30.11 37.08 6.17 80.20 37.30 31.32 11.74 6.79 15.25 8.01 10.92 29.58 4.41 27.48 5.03 63 ER14c ExonRegion 1 16.78 36.32 13.37 33.10 33.71 29.96 33.28 28.47 30.70 45.72 9.15 32.93 33.07 11.33 11.29 14.92 10.54 5.83 13.29 28.42 2.01 16.03 6.96 64 E14_Dc NovelBoundary 0 40.82 38.94 24.45 46.01 35.06 51.50 40.23 40.09 44.21 49.96 19.95 18.46 48.86 2.24 4.45 11.88 40.30 12.31 14.40 37.14 0.00 23.45 24.41 65 I14 Intron 0 11.21 11.12 11.60 18.64 19.83 25.24 15.19 10.91 19.49 23.53 5.46 12.40 7.40 14.25 11.02 13.11 11.07 18.65 13.49 19.90 8.95 6.25 9.85 66 I14_SR1 SilentIntronRegion 0 11.21 11.12 11.60 18.64 19.83 25.24 15.19 10.91 19.49 23.53 5.46 12.40 7.40 14.25 11.02 13.11 11.07 18.65 13.49 19.90 8.95 6.25 9.85 67 E15_Aa NovelBoundary 0 27.49 19.47 10.79 14.38 37.78 71.89 51.76 13.23 33.39 33.58 4.95 0.00 27.11 19.90 8.90 22.39 0.00 18.61 36.61 37.39 11.74 0.00 8.37 68 ER15a ExonRegion 0 18.60 21.92 0.79 17.44 44.85 19.57 25.11 10.68 14.31 16.25 18.40 17.17 2.19 19.20 13.92 19.12 13.76 8.39 6.78 23.28 4.76 6.57 4.95 69 E15_Da NovelBoundary 0 14.82 13.29 13.28 14.62 12.73 21.29 17.49 12.20 8.83 31.19 7.32 5.70 0.00 7.30 0.00 4.19 4.02 8.87 13.55 27.74 11.68 2.94 4.35 70 E15a_E16a KnownJunction 0 7.33 19.93 0.00 13.29 15.03 2.50 2.25 6.45 21.56 1.32 11.58 12.45 0.00 4.71 19.66 12.30 4.30 17.87 3.86 12.14 0.00 0.00 12.80 71 I15 Intron 0 29.06 16.95 4.03 10.46 29.52 27.88 19.81 12.00 17.60 23.47 5.69 9.12 3.79 10.61 7.16 11.66 10.52 9.47 8.59 18.78 4.86 6.13 5.76 72 I15_AR1 ActiveIntronRegion 0 29.20 17.03 4.05 10.51 29.67 28.01 19.90 12.06 17.68 23.58 5.71 9.16 3.81 10.66 7.19 11.72 10.57 9.52 8.63 18.87 4.89 6.16 5.79 73 E16_Aa NovelBoundary 0 29.71 20.46 15.17 47.58 46.43 49.06 43.28 24.73 31.92 36.18 12.53 18.31 19.64 12.07 8.90 11.45 8.42 6.09 8.75 19.88 8.65 9.25 4.35 74 ER16a ExonRegion 0 38.81 33.48 20.20 35.76 43.37 44.71 28.81 26.51 23.90 48.03 17.01 24.12 26.76 12.82 17.75 18.50 12.16 13.16 13.37 29.24 5.94 12.35 7.33 75 IG50 Intergenic 0 23.84 32.42 13.17 25.65 26.13 23.55 19.66 15.52 16.91 26.21 7.00 12.66 12.77 6.13 8.60 8.41 4.22 4.42 6.60 15.10 1.81 5.20 3.93 76 IG50_AR6 ActiveIntergenicRegion 0 10.87 12.59 6.19 8.58 18.95 26.27 21.47 3.46 5.07 6.73 5.17 14.63 10.65 1.45 0.00 4.02 2.85 2.85 1.21 7.94 0.00 5.86 0.00 77 IG50_SR4 SilentIntergenicRegion 0 15.22 22.00 18.59 30.11 30.97 44.75 23.17 24.96 24.36 41.46 14.37 14.39 13.00 5.12 5.95 10.57 6.79 9.45 21.31 16.68 1.42 12.08 5.69 78 IG50_AR2 ActiveIntergenicRegion 0 22.57 36.98 16.73 28.33 29.53 25.79 23.13 18.69 16.97 27.75 7.60 16.17 14.79 7.07 10.11 7.93 4.32 3.29 4.98 15.00 1.67 5.67 3.41 79 IG50_SR1 SilentIntergenicRegion 0 34.17 31.06 4.69 22.10 19.95 12.80 12.16 7.25 17.08 21.72 3.78 4.88 9.10 5.41 7.73 10.17 3.65 5.95 6.24 17.20 2.69 2.04 5.38