Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDC123 Gene 0 171.44 180.59 225.49 93.58 135.22 138.43 130.02 119.02 92.19 184.85 460.38 341.97 237.06 447.61 501.09 332.98 385.79 127.70 159.08 173.42 151.80 195.59 102.18 2 429258 Transcript 0 3.87 2.37 1.83 0.73 5.98 4.20 1.99 0.00 0.90 3.17 6.72 0.00 10.31 4.47 11.79 11.25 9.90 0.95 0.00 2.13 2.20 0.00 5.65 3 281141 Transcript 1 3.30 3.50 2.21 1.76 1.15 2.66 2.57 1.02 2.01 2.62 24.73 2.02 0.18 4.13 7.19 11.42 32.89 5.39 2.29 4.04 18.00 2.47 4.17 4 467016 Transcript 0 1.16 2.07 1.79 3.68 1.36 2.70 3.75 6.95 4.83 5.65 1.06 9.70 3.94 0.70 0.06 11.80 4.03 7.37 1.62 5.81 0.33 1.06 0.00 5 378900 Transcript 0 10.67 5.39 10.23 1.37 11.97 0.00 0.00 2.30 1.33 6.26 9.90 5.40 14.12 17.31 9.52 23.75 4.21 4.31 4.24 5.82 2.84 7.96 0.00 6 442050 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 455773 Transcript 0 0.00 0.00 1.83 3.30 1.78 0.00 2.21 0.00 2.37 1.40 4.74 6.83 0.00 2.44 2.23 0.00 4.11 2.26 1.84 1.60 1.39 4.59 0.00 8 498747 Transcript 0 0.51 0.01 0.01 0.01 0.04 0.02 0.31 0.01 0.00 0.38 0.04 0.83 0.92 0.04 0.49 0.03 0.09 0.00 0.00 0.44 0.01 0.04 0.00 9 440613 Transcript 0 3.78 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.05 0.00 0.00 7.12 10.75 0.00 7.11 2.28 0.00 3.07 0.00 0.00 0.00 10 497963 Transcript 0 35.91 24.80 11.40 11.65 12.47 23.31 11.79 9.21 6.90 16.17 8.63 13.02 11.67 13.93 22.53 9.07 7.31 7.64 15.28 13.93 3.61 12.51 7.15 11 ER1a ExonRegion 0 2.12 2.03 0.00 0.00 0.00 5.50 3.97 0.00 0.00 2.29 8.70 0.00 0.00 8.93 17.41 8.92 19.81 0.00 0.00 4.26 4.41 0.00 2.94 12 ER1b ExonRegion 0 23.62 10.77 2.90 0.00 7.23 16.57 9.24 1.46 0.93 5.05 41.74 4.41 9.38 20.89 34.46 33.16 49.57 1.85 5.14 11.53 18.94 1.75 14.89 13 E1_Da KnownBoundary 0 16.08 6.64 8.13 3.16 3.90 0.00 11.39 6.20 8.85 9.35 15.95 12.60 30.36 11.60 23.49 40.16 31.23 10.20 7.53 11.95 11.00 2.33 0.00 14 E1a_E1c KnownJunction 0 5.63 2.70 3.67 1.47 11.97 2.90 0.00 0.00 1.79 4.06 4.74 0.00 20.62 0.00 6.18 13.59 0.00 1.91 0.00 0.00 0.00 0.00 8.37 15 ER1c ExonRegion 0 3.30 3.50 2.21 1.76 1.15 2.66 2.57 1.02 2.01 2.62 24.73 2.02 0.18 4.13 7.19 11.42 32.89 5.39 2.29 4.04 18.00 2.47 4.17 16 E1_Ac KnownBoundary 0 0.00 3.35 3.67 1.53 3.48 2.56 0.00 2.46 5.93 2.95 55.44 6.30 0.00 21.60 18.17 7.86 80.41 6.84 4.33 6.33 42.69 3.12 3.93 17 ER1d ExonRegion 0 7.66 5.45 5.40 0.41 3.28 5.83 2.19 4.61 4.60 6.29 35.93 6.76 8.31 22.54 39.43 30.98 44.51 7.20 7.96 9.16 22.10 6.53 20.91 18 E1_Ad KnownBoundary 0 6.52 2.76 4.94 1.53 3.82 2.84 0.00 3.57 3.18 4.43 27.59 0.00 8.28 24.07 95.68 51.01 7.48 7.54 3.67 12.21 15.44 10.72 16.13 19 E1_Ae KnownBoundary 1 161.44 56.17 13.13 8.59 64.01 107.44 47.47 8.79 16.46 13.97 263.07 18.46 176.94 333.92 435.50 384.86 167.84 93.10 241.32 55.16 102.98 131.84 190.36 20 ER1e ExonRegion 1 274.52 118.32 94.99 39.07 77.89 148.27 101.41 35.21 38.52 93.58 364.39 7.06 141.92 291.08 839.43 435.25 525.82 116.34 213.18 74.55 251.22 229.73 196.21 21 E1_Af KnownBoundary 1 683.68 349.28 258.18 141.24 173.26 331.91 282.77 138.42 121.84 238.16 742.98 0.00 112.98 272.53 775.20 770.99 1655.73 367.48 531.78 171.68 604.18 398.75 359.98 22 ER1f ExonRegion 1 502.56 270.92 200.28 76.32 148.06 298.91 232.58 98.91 86.18 204.91 691.12 16.36 196.46 459.08 1420.32 730.15 1394.81 260.33 449.84 163.36 565.13 421.57 344.57 23 ER1g ExonRegion 1 238.02 219.53 212.71 91.92 124.47 249.23 199.22 129.95 106.01 246.51 633.88 69.27 137.79 308.83 512.62 666.30 871.32 316.24 378.69 231.42 355.66 242.02 201.31 24 E1b_E2a KnownJunction 0 55.57 54.00 135.21 39.46 61.71 107.95 51.67 47.36 57.52 86.82 265.17 173.31 142.04 164.40 173.81 115.27 192.43 55.59 51.58 115.37 122.94 57.68 33.55 25 ER2a ExonRegion 1 73.08 63.00 218.83 73.42 70.53 64.91 51.83 117.83 121.44 204.63 1148.21 328.30 178.13 337.94 304.74 208.27 849.26 128.37 163.42 255.40 461.45 90.77 75.63 26 E2_Da KnownBoundary 0 0.00 0.00 0.00 7.42 0.00 0.00 8.66 10.43 5.73 10.40 0.00 13.35 0.00 0.00 0.00 7.26 4.39 0.00 0.00 3.20 2.78 0.00 0.00 27 E2a_E3a KnownJunction 1 251.30 103.86 407.97 185.22 72.07 117.43 82.41 251.91 229.19 452.79 2274.37 295.60 337.96 1518.40 1476.49 1130.30 2501.17 382.37 953.44 789.19 762.27 514.67 611.71 28 ER2b ExonRegion 1 157.74 72.67 344.33 147.69 61.54 79.92 66.62 221.15 198.72 375.94 2195.47 405.83 303.62 1076.11 959.55 802.79 2157.74 329.09 663.06 621.39 817.92 338.19 411.59 29 ER2c ExonRegion 0 1.16 2.07 1.79 3.68 1.36 2.70 3.75 6.95 4.83 5.65 1.06 9.70 3.94 0.70 0.06 11.80 4.03 7.37 1.62 5.81 0.33 1.06 0.00 30 ER3a ExonRegion 0 119.55 95.05 395.10 213.90 101.36 91.06 81.06 288.56 218.76 429.00 1247.55 519.31 421.38 1410.52 1614.75 1539.15 1147.12 511.03 744.33 611.63 429.57 591.18 547.99 31 E3a_E4a KnownJunction 1 178.77 159.18 361.08 215.82 122.24 86.37 113.94 298.12 174.48 354.12 803.47 503.86 606.78 1089.24 1195.50 2007.68 580.27 461.50 649.62 507.12 269.60 546.82 577.05 32 ER4a ExonRegion 0 116.15 169.16 388.29 180.56 133.30 122.81 110.89 271.37 198.55 380.95 964.11 491.20 450.95 852.96 827.65 1217.13 738.70 398.44 408.21 436.10 359.20 398.46 313.51 33 E4a_E5a KnownJunction 0 82.31 202.27 304.07 89.77 193.04 183.76 118.49 159.70 144.62 267.30 1026.10 456.60 305.01 779.98 681.87 610.01 788.31 399.07 193.98 364.84 380.24 271.26 139.65 34 E4a_E6a KnownJunction 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 0.00 1.48 1.56 4.21 6.00 0.00 11.48 4.45 3.93 4.11 1.58 8.47 3.20 0.00 8.14 0.00 35 ER5a ExonRegion 0 112.95 211.34 363.59 118.64 352.45 402.48 297.92 214.27 159.52 348.22 1063.46 623.49 365.68 856.66 663.63 503.53 805.35 244.21 264.88 334.09 371.62 304.28 129.46 36 E5a_E6a KnownJunction 0 154.40 398.02 447.86 152.36 309.51 467.17 482.74 305.18 215.54 456.04 1152.87 573.34 403.87 1090.89 816.99 620.52 894.62 310.57 231.82 399.55 343.61 357.73 147.68 37 ER6a ExonRegion 0 455.40 556.90 434.67 185.55 295.92 422.62 355.90 307.02 230.69 426.18 1418.03 877.76 611.53 1318.27 1056.92 973.21 1085.32 357.23 389.44 397.83 403.03 501.55 274.41 38 E6_Ab KnownBoundary 0 565.58 598.05 497.38 237.17 372.92 290.00 314.13 328.39 232.00 408.54 1121.44 1027.38 582.27 1468.13 1154.22 906.60 902.48 312.06 449.24 400.44 340.39 638.97 292.37 39 ER6b ExonRegion 0 475.78 488.48 496.60 203.66 311.55 251.16 328.72 278.54 207.76 397.56 1089.68 918.01 528.82 1199.64 944.44 794.01 950.91 296.16 368.90 434.28 294.17 503.66 228.61 40 E6a_E7a KnownJunction 0 414.96 429.59 487.62 169.04 369.19 247.87 329.01 259.63 166.69 379.05 1082.06 859.03 548.34 1014.90 895.48 546.95 899.86 176.55 278.50 400.89 260.14 368.14 162.70 41 E7_Da NovelBoundary 0 368.51 316.52 343.63 117.47 255.35 277.11 188.53 218.55 127.60 305.12 649.37 526.82 315.89 554.01 433.28 258.22 497.62 125.73 203.11 254.20 98.60 287.00 96.63 42 ER7a ExonRegion 0 389.10 416.42 478.76 167.02 357.60 278.97 261.08 277.39 175.51 391.61 1094.58 778.61 517.87 923.08 742.07 484.94 798.39 193.36 265.93 367.81 206.79 378.33 144.18 43 E7b_E8a KnownJunction 0 598.25 545.43 459.59 207.57 454.75 298.81 324.07 286.41 169.56 380.61 1176.19 871.78 682.42 1025.73 861.74 601.04 827.68 167.93 313.04 330.64 214.37 483.32 101.75 44 ER7b ExonRegion 0 461.28 455.63 460.19 186.03 385.16 300.03 270.01 281.45 175.39 410.66 1155.23 790.61 620.13 937.03 788.50 509.39 801.57 189.70 275.36 332.86 195.64 438.23 110.61 45 ER8a ExonRegion 0 489.58 521.24 605.62 265.60 361.72 309.24 316.76 320.58 206.57 451.99 1114.27 1040.61 725.23 1192.70 1026.78 745.34 846.85 222.92 332.33 365.48 204.77 547.94 204.95 46 E8a_E9a KnownJunction 0 653.89 638.90 758.55 320.77 524.11 505.50 374.23 398.99 242.71 446.42 1075.43 1267.46 940.20 1369.66 1591.70 1027.00 872.28 263.06 543.83 551.92 151.29 783.24 290.06 47 E8a_E11a KnownJunction 0 10.67 5.39 10.23 1.37 11.97 0.00 0.00 2.30 1.33 6.26 9.90 5.40 14.12 17.31 9.52 23.75 4.21 4.31 4.24 5.82 2.84 7.96 0.00 48 I8_AR1 ActiveIntronRegion 0 0.00 2.03 0.00 0.00 2.68 9.17 27.80 0.00 0.00 0.00 5.80 0.00 8.66 6.37 0.00 11.89 3.30 0.00 0.00 0.00 4.41 0.00 0.00 49 I8_AR3 ActiveIntronRegion 0 16.93 8.13 7.35 9.54 28.99 25.67 50.97 8.64 5.76 5.54 9.66 7.94 41.43 9.74 11.12 5.94 13.20 0.92 0.00 6.38 2.20 2.08 1.96 50 ER9a ExonRegion 0 423.77 534.05 663.02 284.57 581.99 449.62 479.24 306.47 215.54 439.90 981.27 1112.19 855.96 1058.56 1108.14 694.08 651.21 207.13 278.03 430.52 130.40 527.82 200.74 51 E9_Da KnownBoundary 0 606.70 674.16 693.26 331.49 783.87 542.02 726.17 297.91 228.61 454.42 1084.70 1014.03 768.78 1015.49 1223.81 749.89 707.81 184.38 215.82 383.95 125.96 581.90 189.85 52 ER9b ExonRegion 0 398.81 572.84 632.64 286.24 581.34 405.66 534.38 269.84 206.91 430.61 974.41 1072.16 853.25 877.45 1059.37 684.93 629.45 223.71 245.88 321.58 125.51 487.79 182.77 53 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER10a ExonRegion 0 1.54 0.03 0.02 0.04 0.11 0.05 0.92 0.02 0.00 1.15 0.11 2.49 2.76 0.11 1.47 0.08 0.27 0.00 0.00 1.31 0.03 0.11 0.00 55 E10_Da NovelBoundary 0 222.71 198.32 214.27 179.70 180.73 261.84 280.65 236.26 250.84 133.18 133.82 127.24 168.82 140.56 140.80 274.12 206.92 277.41 334.60 335.12 168.28 95.40 224.50 56 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E11a_E13a KnownJunction 0 0.00 0.00 3.67 6.59 3.57 0.00 4.42 0.00 4.75 2.79 9.48 13.65 0.00 4.89 4.45 0.00 8.23 4.52 3.67 3.20 2.78 9.19 0.00 58 ER11a ExonRegion 1 439.58 558.81 628.15 254.67 442.33 323.63 368.43 248.66 212.70 419.77 721.44 1251.66 913.26 828.13 1109.38 670.16 493.65 274.55 315.24 352.16 158.67 399.10 213.77 59 I11_AR1 ActiveIntronRegion 0 17.18 9.71 10.06 7.09 14.06 12.08 19.54 7.47 11.25 16.49 25.04 30.09 50.71 20.78 17.52 30.87 20.59 9.71 7.22 15.86 9.57 17.54 8.99 60 I11_AR6 ActiveIntronRegion 0 35.97 19.92 19.62 11.54 27.64 10.68 21.81 24.15 12.36 20.19 31.16 32.57 52.19 39.42 31.11 42.21 30.71 26.11 19.09 22.62 19.12 27.86 20.46 61 E12_Aa NovelBoundary 0 40.38 33.15 25.96 25.20 11.88 18.06 32.55 26.86 30.18 30.65 17.95 6.30 14.12 17.01 38.69 33.84 24.68 43.24 30.49 22.82 10.81 0.00 4.35 62 ER12a ExonRegion 0 21.94 9.05 10.90 4.37 3.71 6.28 5.81 6.45 3.05 7.65 9.66 16.42 12.36 14.41 22.09 10.77 6.84 4.93 13.97 9.20 4.04 19.27 8.08 63 E12_Ab KnownBoundary 0 41.64 29.01 23.57 10.45 7.39 4.20 14.49 22.80 15.77 24.63 19.32 18.91 19.48 33.85 20.03 23.93 0.00 21.02 13.08 18.41 8.65 18.06 14.51 64 ER12b ExonRegion 0 412.51 445.56 741.95 268.78 176.68 247.23 248.54 305.14 235.34 490.59 905.41 975.79 567.20 987.48 1268.55 688.37 739.81 281.67 293.53 385.70 274.64 493.11 195.08 65 E12a_E13a KnownJunction 0 406.66 401.11 973.62 320.57 315.87 340.37 265.77 331.51 285.15 522.84 817.58 1088.00 477.57 1085.35 1455.22 904.21 713.88 401.06 312.76 355.44 303.20 438.98 240.38 66 E12a_E13b KnownJunction 0 3.78 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.05 0.00 0.00 7.12 10.75 0.00 7.11 2.28 0.00 3.07 0.00 0.00 0.00 67 ER13a ExonRegion 0 315.46 395.53 555.30 198.79 276.66 262.20 288.62 243.62 200.37 387.39 801.37 922.31 527.44 981.99 1400.80 693.45 651.43 308.00 318.23 370.79 322.13 374.50 217.03 68 E13_Da KnownBoundary 0 87.87 188.12 183.58 72.19 119.78 127.99 129.84 107.90 89.52 175.27 310.13 154.85 80.84 494.32 472.59 202.43 241.79 96.50 95.44 108.40 152.47 110.77 68.38 69 E13a_E13c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 E13_Db KnownBoundary 0 28.67 35.19 5.35 11.99 29.71 50.65 37.23 4.68 4.40 15.20 5.37 6.30 0.00 4.83 19.53 7.78 3.65 15.75 28.80 28.57 15.14 9.06 0.00 71 E13b_E13b KnownJunction 0 182.25 305.87 305.07 122.50 213.41 179.10 235.03 177.23 155.32 262.39 639.32 408.43 232.45 1075.05 1219.86 383.15 666.57 150.56 202.83 207.16 387.22 298.94 108.07 72 ER13b ExonRegion 0 148.69 303.00 290.31 121.30 202.91 222.96 227.61 175.44 150.89 274.11 653.80 378.11 206.36 1054.32 1180.57 386.87 592.51 192.47 202.54 201.42 377.94 259.05 115.02 73 ER13c ExonRegion 0 49.88 40.55 11.90 18.92 21.23 40.33 17.77 11.97 10.75 24.69 7.59 9.62 10.98 13.44 22.97 7.37 7.78 10.36 16.59 18.66 3.19 5.74 6.22 74 E13_Dc NovelBoundary 0 44.16 88.93 69.72 35.26 55.77 42.99 52.24 47.28 37.18 59.15 231.85 191.61 127.91 152.33 174.05 120.05 182.70 47.22 32.10 72.55 102.86 54.13 12.89 75 ER13d ExonRegion 0 140.11 260.70 269.83 101.67 173.39 166.88 191.18 173.19 142.04 246.58 645.59 439.01 274.84 928.02 1053.74 362.00 575.68 145.97 156.08 183.83 371.99 227.10 83.99 76 ER13e ExonRegion 0 147.45 258.26 267.13 100.40 179.28 156.48 188.89 161.32 137.10 240.47 645.59 443.05 259.52 885.15 932.27 373.50 590.86 139.81 152.90 195.74 379.77 236.83 85.16 77 ER13f ExonRegion 0 140.48 215.86 219.89 70.77 131.04 98.43 102.34 130.67 113.85 193.63 556.29 380.78 235.79 596.21 699.71 326.79 442.49 112.62 101.45 175.48 312.76 183.56 74.08 78 E13_Dd KnownBoundary 0 116.47 179.31 179.89 43.35 62.65 42.87 36.52 93.85 85.16 157.09 411.63 248.33 135.22 349.70 408.43 266.77 278.63 65.87 76.99 155.45 216.47 121.24 76.14 79 ER13g ExonRegion 0 233.28 132.35 126.02 49.94 90.76 83.91 69.56 85.11 75.86 124.28 233.07 134.85 140.48 440.08 566.03 168.12 241.82 38.99 90.63 83.67 133.30 177.30 51.34 80 E13_De KnownBoundary 0 122.39 20.98 126.93 52.61 58.74 31.46 38.07 77.26 70.28 136.59 94.39 60.17 27.76 171.70 206.69 48.19 69.94 30.22 34.45 38.35 31.01 67.11 39.86 81 ER13h ExonRegion 1 83.44 48.84 53.67 26.06 60.41 28.07 50.29 28.91 38.25 52.41 117.45 47.92 20.75 132.71 172.60 63.42 37.88 21.58 35.69 36.78 19.61 42.38 17.32 82 ER13i ExonRegion 0 2.12 10.17 0.00 2.73 0.00 1.83 0.00 0.00 2.47 0.00 3.87 4.33 0.00 4.87 11.61 2.97 0.00 1.85 0.00 0.00 0.00 0.00 0.00