Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RSU1 Gene 0 95.39 38.06 66.27 25.80 66.80 96.91 39.54 65.72 38.99 55.63 193.98 71.57 116.24 123.16 82.30 113.87 102.99 48.73 20.83 27.83 237.86 202.01 142.70 2 345264 Transcript 0 2.69 1.97 0.85 1.42 0.00 3.95 2.53 1.68 0.30 0.68 2.40 0.46 1.56 1.16 7.30 1.89 1.30 0.39 2.56 0.00 3.91 1.55 2.54 3 377911 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 377903 Transcript 0 2.89 0.20 3.13 0.65 7.24 0.00 2.60 1.60 1.69 0.00 0.00 1.30 6.84 1.03 0.00 1.67 2.71 4.25 0.00 1.50 3.85 0.00 0.00 5 377912 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 396726 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 464074 Transcript 0 0.24 0.10 0.73 0.06 0.85 0.47 1.11 0.32 0.75 0.34 0.16 2.62 3.41 0.63 0.57 3.04 1.32 2.06 0.55 0.56 4.00 0.59 3.22 8 377921 Transcript 0 2.00 2.03 5.86 0.99 1.23 8.20 1.12 9.16 0.60 7.06 2.22 0.82 0.30 15.73 17.47 20.33 11.39 11.84 3.01 5.78 67.74 32.06 6.06 9 ER1a ExonRegion 0 2.69 1.97 0.85 1.42 0.00 3.95 2.53 1.68 0.30 0.68 2.40 0.46 1.56 1.16 7.30 1.89 1.30 0.39 2.56 0.00 3.91 1.55 2.54 10 E1_Ab KnownBoundary 0 0.00 0.00 1.83 1.83 0.00 7.95 0.00 2.01 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 7.56 3.35 1.36 1.83 0.00 22.77 12.98 0.00 3.07 4.43 20.22 6.30 0.00 4.71 21.51 12.30 9.35 7.96 4.24 0.00 30.09 14.08 25.35 12 ER1b ExonRegion 1 4.23 2.71 4.22 2.73 0.59 16.50 7.94 3.46 1.24 3.57 16.75 4.33 4.69 8.12 32.88 8.92 6.60 2.26 5.66 0.00 22.04 10.19 11.75 13 ER1c ExonRegion 0 20.65 17.96 8.67 4.85 12.73 71.29 18.02 4.68 7.98 14.10 42.29 5.60 1.26 18.50 29.58 27.18 18.36 11.18 14.61 5.86 38.48 31.25 50.85 14 E1_Ad KnownBoundary 0 41.93 39.60 6.86 1.96 26.83 131.29 25.75 7.15 8.77 9.37 47.06 11.85 0.00 37.20 41.54 45.37 40.21 11.65 29.46 9.59 30.89 35.03 76.49 15 E1_Ae KnownBoundary 0 771.91 200.49 87.73 42.75 326.91 1042.64 311.35 72.82 76.45 91.57 1048.95 10.65 79.38 513.33 416.59 807.74 541.28 258.30 221.65 115.69 1002.96 591.45 1164.52 16 ER1d ExonRegion 0 297.58 105.95 50.89 26.12 127.63 530.76 136.63 37.62 43.85 58.19 502.94 2.16 36.27 237.77 194.19 377.56 251.97 127.74 111.91 56.67 458.30 302.94 541.81 17 ER1e ExonRegion 0 411.72 96.18 104.82 37.24 174.99 482.15 137.71 110.11 91.05 109.24 839.82 13.43 75.59 292.44 217.55 598.27 422.17 273.41 99.50 75.38 887.77 485.80 796.56 18 E1_Da KnownBoundary 0 2.89 0.00 5.06 0.00 0.00 7.15 2.25 4.03 1.24 4.32 0.00 0.00 0.00 4.83 18.30 15.72 0.00 1.58 3.86 8.88 28.17 8.76 0.00 19 E1a_E1f KnownJunction 0 154.62 15.13 54.02 11.22 24.28 53.66 21.07 46.58 42.48 50.34 204.42 79.53 140.74 31.73 34.37 110.31 74.52 46.26 17.41 15.34 258.35 55.54 111.57 20 E1a_E2a KnownJunction 0 16.67 11.58 38.20 1.30 15.53 35.09 18.02 10.27 4.54 11.17 7.48 25.51 19.97 23.13 17.80 31.36 13.84 8.50 0.00 2.49 36.70 3.12 10.93 21 ER1f ExonRegion 0 2.00 2.03 5.86 0.99 1.23 8.20 1.12 9.16 0.60 7.06 2.22 0.82 0.30 15.73 17.47 20.33 11.39 11.84 3.01 5.78 67.74 32.06 6.06 22 E1_Af KnownBoundary 0 15.48 3.35 6.36 2.76 7.98 13.74 0.00 20.82 1.30 9.94 0.00 0.00 0.00 28.78 33.87 16.41 18.51 10.36 0.00 5.43 70.24 35.52 7.26 23 ER1g ExonRegion 0 45.17 19.16 68.60 23.76 32.42 79.68 20.84 87.98 74.39 84.39 587.53 21.61 85.01 136.75 80.16 132.46 261.96 71.96 38.40 48.63 658.10 202.12 189.72 24 E1b_E2a KnownJunction 0 43.64 32.03 130.98 54.34 52.97 135.72 25.26 149.02 103.27 133.26 793.94 31.06 105.19 387.31 207.18 313.59 438.34 161.79 90.64 95.36 799.65 491.34 526.18 25 E1b_E3a NovelJunction 0 0.00 0.00 3.34 0.00 0.00 0.00 0.00 3.90 5.44 1.67 6.79 0.00 0.00 5.06 0.00 4.02 0.00 4.97 0.00 3.26 6.24 5.39 16.39 26 ER2a ExonRegion 0 72.92 24.92 180.59 60.15 69.62 138.76 34.37 166.81 116.10 137.88 619.59 95.42 216.11 403.77 277.04 549.96 305.62 217.31 108.61 93.66 726.06 591.80 843.39 27 E2a_E3a KnownJunction 0 180.33 36.90 191.09 65.33 90.66 149.52 29.77 200.48 135.47 124.64 617.21 111.94 321.73 321.21 257.37 718.53 339.97 269.82 96.76 110.45 793.47 487.11 992.00 28 ER3a ExonRegion 0 147.95 40.94 182.28 70.32 182.66 373.76 90.16 224.37 132.35 176.72 698.73 166.59 271.56 452.53 278.14 488.58 392.18 222.34 93.27 92.98 1032.76 657.91 591.62 29 E3a_E4a KnownJunction 0 199.22 51.90 143.28 44.75 149.41 273.54 85.81 204.01 124.85 142.74 455.22 81.33 125.80 183.00 103.96 187.98 155.31 157.15 42.45 42.89 588.37 259.32 255.75 30 ER4a ExonRegion 0 337.27 152.25 191.72 74.67 139.84 374.13 122.22 221.88 135.46 168.74 702.57 222.11 364.32 445.17 218.18 364.67 406.43 217.83 62.32 91.15 1094.93 590.95 449.33 31 E4a_E5a KnownJunction 0 396.37 204.17 231.98 69.39 151.10 337.76 141.89 257.78 147.34 211.03 737.98 209.77 453.38 484.43 346.50 296.08 353.16 196.24 58.26 100.54 948.10 503.16 313.28 32 ER5a ExonRegion 0 338.49 183.59 192.65 70.67 170.96 284.33 118.57 198.19 130.73 176.19 577.80 210.16 344.75 465.71 250.84 378.28 316.69 183.80 65.78 83.70 828.75 527.26 379.89 33 E5a_E6a KnownJunction 0 258.71 176.22 201.23 113.84 252.97 329.75 182.97 185.41 140.48 163.94 615.31 132.04 313.29 472.37 254.40 357.09 327.72 171.49 76.99 110.26 788.53 522.51 480.85 34 ER6a ExonRegion 0 180.31 106.31 208.54 85.51 143.63 233.21 92.39 190.28 118.78 159.04 466.92 202.39 392.98 405.08 253.39 303.60 298.98 170.94 49.33 84.33 669.81 460.46 383.22 35 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 4.35 36 E6a_E8a KnownJunction 0 231.67 108.60 313.29 121.53 158.23 364.96 107.40 210.26 125.64 214.49 671.43 282.54 437.15 550.06 355.03 468.85 427.96 221.65 75.77 99.52 801.99 465.44 575.77 37 E6a_E9a NovelJunction 0 0.00 0.00 5.97 0.00 4.07 0.00 1.81 0.00 24.16 0.00 2.68 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 3.03 2.39 0.00 38 E6b_E7b KnownJunction 0 5.78 0.00 5.77 1.30 6.45 0.00 3.36 3.20 3.39 0.00 0.00 0.00 6.17 2.06 0.00 3.33 4.77 8.50 0.00 3.00 2.41 0.00 0.00 39 ER6b ExonRegion 0 0.00 0.41 0.49 0.00 8.03 0.00 1.85 0.00 0.00 0.00 0.00 2.60 7.50 0.00 0.00 0.00 0.66 0.00 0.00 0.00 5.29 0.00 0.00 40 I6_AR2 ActiveIntronRegion 0 20.12 5.64 9.04 3.82 15.63 1.09 15.60 7.65 1.64 3.72 1.34 1.71 4.07 0.79 3.89 7.95 8.50 10.38 1.58 5.48 5.89 0.41 4.94 41 I6_AR4 ActiveIntronRegion 0 5.18 1.40 5.49 2.26 7.56 2.15 11.22 6.84 3.62 3.05 2.01 5.58 29.04 1.78 0.00 7.72 4.38 6.93 3.25 6.84 4.15 1.15 5.67 42 ER7a ExonRegion 0 0.00 0.00 0.00 0.23 1.34 0.00 1.77 0.29 0.00 0.19 0.32 0.72 0.78 0.00 1.93 2.97 3.85 3.70 0.00 2.13 3.67 0.69 0.49 43 ER7b ExonRegion 0 4.68 5.86 2.04 0.00 6.44 1.39 8.07 4.18 1.69 0.60 1.15 6.04 13.14 2.98 1.08 4.70 10.29 10.12 2.96 2.05 12.97 3.17 8.67 44 E7_Da KnownBoundary 0 3.33 2.50 8.57 0.00 4.33 2.56 6.54 1.85 5.41 3.12 0.00 18.91 25.49 4.94 0.00 11.71 4.11 12.48 4.80 0.00 8.59 3.12 12.04 45 ER7c ExonRegion 0 0.97 0.41 2.91 0.00 2.06 1.89 2.69 0.99 1.52 1.18 0.33 9.77 12.86 2.51 0.33 9.17 1.41 4.54 2.18 0.12 6.04 1.67 8.05 46 E7_Db NovelBoundary 0 10.00 3.35 0.00 6.19 0.00 0.00 21.15 4.97 0.00 1.34 0.00 11.70 18.83 0.00 0.00 11.88 8.88 6.14 0.00 0.00 8.83 6.25 19.89 47 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER8a ExonRegion 0 285.48 114.02 251.16 108.16 221.58 294.54 128.13 201.25 105.56 185.22 663.36 243.75 436.88 484.01 292.28 470.20 390.99 230.91 73.24 99.36 896.35 580.50 542.84 49 E8a_E9a KnownJunction 0 627.44 298.57 315.90 126.29 430.22 380.86 228.94 211.90 121.38 200.18 825.16 211.87 623.01 580.38 415.73 495.68 469.47 197.82 116.99 134.74 999.19 738.78 651.58 50 I8_SR2 SilentIntronRegion 0 23.60 8.21 6.19 4.02 12.84 3.85 9.47 5.66 7.35 5.20 3.42 9.42 14.79 1.39 2.90 5.54 3.41 4.53 3.76 3.39 4.21 2.44 7.94 51 I8_AR8 ActiveIntronRegion 0 13.37 1.39 0.00 0.80 18.95 1.28 6.53 2.91 1.34 0.00 0.00 5.27 0.47 0.00 1.60 3.32 0.00 0.00 0.00 3.62 0.00 1.42 4.65 52 ER9a ExonRegion 0 515.13 179.16 234.41 80.59 223.74 250.09 120.41 200.67 114.13 171.69 637.54 204.28 368.98 440.69 288.77 343.72 378.67 117.91 53.91 89.63 931.22 604.41 413.88 53 E9_Da KnownBoundary 0 237.00 184.64 208.30 85.94 260.61 328.45 190.52 200.65 98.84 161.14 653.53 169.56 285.37 485.26 383.21 340.25 428.70 104.75 47.72 66.09 948.59 540.20 441.24 54 ER9b ExonRegion 0 116.88 83.99 206.93 73.70 315.52 293.49 163.39 223.64 106.13 178.57 525.00 238.55 370.54 356.80 285.61 266.62 231.06 72.18 41.43 78.44 442.88 729.19 341.75 55 E9_Db KnownBoundary 0 120.47 77.03 288.46 118.30 245.25 234.64 111.29 306.70 139.73 220.21 582.83 298.00 422.70 435.52 415.60 368.19 235.25 42.57 90.26 88.97 227.59 1327.11 503.30 56 ER9c ExonRegion 0 37.23 12.87 22.12 9.70 25.78 25.38 13.85 21.58 12.85 18.28 32.74 37.59 48.90 21.15 19.05 15.40 12.47 2.76 3.75 6.70 12.76 75.77 22.02 57 ER9d ExonRegion 0 1.88 1.81 0.00 3.79 5.35 0.00 0.00 0.00 0.96 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 1.85 2.94 58 IG21 Intergenic 0 0.70 0.48 0.15 0.29 11.91 2.45 3.77 22.23 2.49 25.83 0.08 0.20 0.35 0.13 0.38 0.27 0.31 0.16 1.85 0.14 0.12 0.19 0.29 59 IG21_AR6 ActiveIntergenicRegion 0 1.00 0.35 0.57 1.39 36.94 13.69 8.07 113.66 9.10 111.17 0.23 0.88 0.00 0.48 0.49 0.71 0.00 0.00 4.24 0.00 0.00 0.00 0.79 60 IG21_SR4 SilentIntergenicRegion 0 0.81 0.35 0.12 0.43 22.28 3.66 6.65 45.79 3.89 45.45 0.14 0.33 0.40 0.09 0.50 0.43 0.40 0.07 3.17 0.00 0.02 0.19 0.24 61 IG21_AR5 ActiveIntergenicRegion 0 0.89 0.00 0.00 0.00 19.03 4.32 8.66 27.21 2.13 45.48 0.00 1.11 0.00 0.00 1.44 0.42 0.00 0.00 2.76 0.31 0.00 0.29 0.00 62 IG21_SR3 SilentIntergenicRegion 0 1.43 0.82 0.00 0.51 41.43 7.99 13.24 65.72 5.94 82.26 0.15 0.18 0.60 0.16 1.19 0.30 0.99 0.14 4.08 0.05 0.33 0.63 0.07 63 IG21_AR4 ActiveIntergenicRegion 0 0.57 0.27 0.00 0.41 44.28 8.11 17.63 75.24 8.21 113.15 0.52 0.00 1.23 1.19 0.00 0.90 0.00 0.73 5.26 0.00 0.00 0.00 1.19 64 IG21_SR2 SilentIntergenicRegion 0 0.57 0.54 0.00 1.23 47.31 14.54 19.36 86.12 9.37 131.09 0.63 0.00 4.71 0.95 0.27 0.88 1.77 0.01 6.80 0.00 0.00 0.56 1.18 65 IG21_AR3 ActiveIntergenicRegion 0 0.62 0.59 0.33 0.39 19.86 7.78 9.55 51.41 7.03 74.26 0.11 0.00 0.57 0.00 0.29 1.31 0.78 0.00 7.54 0.00 0.00 0.20 0.00 66 IG21_SR1 SilentIntergenicRegion 0 0.48 0.70 0.01 0.00 17.73 6.32 6.89 33.22 4.74 58.36 0.07 0.14 0.29 0.28 1.15 0.00 1.20 0.00 5.27 0.00 0.50 0.00 1.90 67 IG21_AR2 ActiveIntergenicRegion 0 0.25 0.24 0.00 0.00 16.32 9.21 8.12 26.77 4.19 42.14 0.00 0.00 0.00 0.32 0.29 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.71