Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACBD5 Gene 0 42.35 105.09 51.62 66.46 68.58 143.84 75.36 68.36 95.58 88.68 66.11 100.57 74.21 82.80 52.42 43.08 47.49 62.63 39.54 80.27 30.00 57.30 40.35 2 375889 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 375905 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 412279 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 375901 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 426079 Transcript 0 1.59 0.68 0.00 0.08 0.30 10.65 1.62 0.00 7.07 1.56 0.48 0.00 0.91 0.81 0.00 0.00 0.00 2.16 2.57 2.66 0.06 0.12 0.08 7 396271 Transcript 0 11.34 0.00 2.87 2.83 8.66 50.31 0.00 6.12 18.34 13.97 17.90 12.60 0.00 0.00 0.00 0.00 4.30 11.48 4.80 9.46 8.96 0.00 12.98 8 375897 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 476758 Transcript 0 0.91 3.25 1.13 0.59 1.36 5.05 1.93 2.71 1.18 1.77 0.81 2.34 5.45 1.63 2.60 2.65 0.91 5.41 2.51 2.95 2.62 1.29 3.27 10 375888 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 IG49 Intergenic 0 1.66 19.68 1.87 1.84 2.56 1.02 2.88 2.95 2.56 3.86 1.28 6.37 1.21 3.22 3.24 1.91 1.09 1.41 1.44 2.18 0.15 0.29 0.71 12 IG49_SR3 SilentIntergenicRegion 0 0.00 65.34 2.11 1.99 2.14 0.33 2.59 1.38 1.80 2.13 0.69 1.59 0.00 0.87 0.18 0.00 0.59 0.65 0.28 1.51 0.00 0.56 0.52 13 IG49_AR1 ActiveIntergenicRegion 0 0.90 0.88 2.20 5.62 1.54 0.78 0.25 6.11 1.44 8.26 0.82 0.90 0.00 11.69 8.27 4.51 2.81 4.57 4.06 4.52 0.94 0.00 0.00 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1b ExonRegion 0 0.00 5.34 0.00 0.20 4.48 2.89 2.68 0.00 0.37 1.46 4.06 0.00 2.23 5.20 9.36 4.83 3.38 6.74 3.74 1.38 0.88 2.24 1.84 16 E1_Ac KnownBoundary 0 3.19 14.93 1.66 0.00 8.57 14.37 9.27 0.00 0.00 5.75 11.06 0.00 12.82 16.60 15.45 15.98 16.64 14.26 19.58 11.19 5.56 5.27 10.76 17 E1a_E3c KnownJunction 0 0.00 5.20 3.61 2.06 10.70 12.49 28.75 0.00 5.35 12.92 23.48 0.00 0.00 9.24 11.13 7.26 29.55 13.80 24.66 2.56 11.61 15.61 15.11 18 ER1c ExonRegion 0 0.00 8.13 1.23 1.36 10.70 11.92 15.23 0.00 3.09 6.88 17.40 0.00 9.38 14.62 20.31 11.89 13.20 13.86 14.33 4.26 7.71 10.42 7.34 19 ER1d ExonRegion 0 0.36 6.31 2.45 1.36 10.33 12.84 17.44 0.36 3.75 8.90 19.40 0.00 9.38 15.07 15.91 11.48 22.20 13.57 18.67 4.77 8.89 11.28 8.81 20 ER2a ExonRegion 0 1.59 0.68 0.00 0.08 0.30 10.65 1.62 0.00 7.07 1.56 0.48 0.00 0.91 0.81 0.00 0.00 0.00 2.16 2.57 2.66 0.06 0.12 0.08 21 E2_Ab KnownBoundary 0 6.30 0.00 0.00 1.47 0.00 33.50 5.39 0.00 14.99 2.87 0.00 0.00 0.00 2.47 0.00 0.00 0.00 10.36 7.34 8.50 0.00 0.00 0.00 22 ER2b ExonRegion 0 9.52 15.76 4.63 2.03 13.04 43.46 19.38 0.65 10.34 8.17 12.77 0.00 3.76 13.53 12.00 14.06 12.79 19.82 17.12 18.57 12.83 11.65 19.64 23 E2_Ac KnownBoundary 0 0.00 12.63 8.10 5.23 0.00 30.21 6.40 6.98 14.18 14.88 4.79 0.00 0.00 16.89 6.30 0.00 4.30 39.88 8.47 15.34 0.00 11.51 4.35 24 ER2c ExonRegion 0 3.43 6.96 3.46 2.42 7.02 39.41 5.41 3.34 16.30 11.44 10.95 4.81 4.38 13.10 1.68 0.33 5.43 17.37 7.29 13.81 2.60 10.00 7.70 25 E2a_E3c KnownJunction 0 11.34 0.00 2.87 2.83 8.66 50.31 0.00 6.12 18.34 13.97 17.90 12.60 0.00 0.00 0.00 0.00 4.30 11.48 4.80 9.46 8.96 0.00 12.98 26 E2a_E3d KnownJunction 0 0.00 5.85 0.00 0.00 0.00 0.00 10.55 0.00 6.37 1.45 2.42 0.00 0.00 4.24 0.00 0.00 0.00 2.16 7.15 3.26 0.00 8.82 0.00 27 E3_Ab NovelBoundary 0 10.08 11.18 10.23 7.66 12.22 38.67 8.30 12.61 6.22 5.69 5.32 5.40 0.00 14.48 23.49 29.05 4.77 43.98 13.27 8.69 14.46 4.90 23.56 28 ER3a ExonRegion 0 2.46 1.87 2.50 1.25 2.46 17.16 2.49 2.90 1.58 1.79 2.16 0.00 0.00 4.29 9.28 10.58 0.00 21.66 6.50 4.77 4.76 1.92 8.34 29 ER3b ExonRegion 0 3.23 7.53 7.05 4.20 4.09 26.81 14.90 6.03 6.71 15.16 14.94 1.58 8.05 14.18 13.53 31.33 11.91 42.57 17.69 10.93 11.85 15.88 40.48 30 E3_Ac KnownBoundary 0 3.48 12.50 1.15 0.00 4.33 33.67 20.62 2.42 1.79 8.76 13.11 6.30 6.01 16.66 4.45 30.59 16.92 19.86 9.22 12.53 17.92 17.33 43.28 31 E3_Ad KnownBoundary 0 3.19 5.46 8.49 9.82 7.47 12.38 18.11 11.05 27.63 27.72 21.22 0.00 0.00 11.77 15.20 15.72 11.87 41.49 13.55 21.60 13.41 29.02 0.00 32 ER3c ExonRegion 1 10.58 14.03 7.84 10.90 18.73 73.35 38.79 12.44 36.07 43.81 55.67 12.99 5.16 33.78 22.92 39.83 48.19 64.67 41.73 36.38 34.82 39.80 36.12 33 ER3d ExonRegion 1 8.10 16.83 15.42 15.78 11.32 40.67 18.66 31.26 53.20 54.43 60.99 10.31 13.50 62.15 31.45 49.55 58.31 99.87 43.49 61.66 49.56 40.90 56.55 34 E3a_E4a KnownJunction 1 0.00 16.90 18.15 30.50 14.94 79.16 15.59 44.94 79.92 86.01 99.87 18.91 47.89 118.96 71.08 104.67 55.54 99.07 53.93 75.23 59.99 60.38 140.25 35 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 4.43 9.23 0.00 3.04 0.00 0.00 0.00 0.00 0.00 5.19 0.00 4.39 8.87 0.00 3.26 0.00 2.94 3.41 36 ER4a ExonRegion 0 11.68 57.88 18.54 28.98 40.36 134.85 60.68 35.84 73.53 69.57 70.72 43.12 44.92 76.86 32.32 43.35 70.76 72.35 32.51 60.17 37.43 49.61 48.35 37 E4a_E5a KnownJunction 1 28.45 90.58 10.61 40.39 64.26 122.88 87.04 46.95 73.99 75.83 53.01 43.96 80.51 87.00 18.91 27.94 29.45 40.96 42.82 64.17 40.59 36.50 27.91 38 ER5a ExonRegion 1 21.95 79.89 20.75 47.94 55.53 143.41 71.87 41.74 94.88 76.47 74.35 93.53 91.36 104.74 31.44 33.87 83.83 53.41 35.56 111.54 36.47 49.01 50.28 39 E5a_E6a KnownJunction 1 13.71 115.31 23.62 66.66 68.51 137.36 88.41 47.69 99.65 90.01 93.97 127.69 125.48 132.44 35.73 31.27 77.42 62.51 8.47 139.47 35.89 73.42 76.40 40 I5_AR1 ActiveIntronRegion 0 26.76 16.27 10.05 10.07 8.71 3.72 7.96 11.95 6.03 9.85 0.72 3.84 4.44 0.70 5.13 1.65 4.02 3.39 4.17 6.63 1.22 0.58 2.20 41 ER6a ExonRegion 0 15.11 77.54 24.16 62.36 42.95 94.59 51.00 46.28 102.65 78.24 94.09 128.57 115.21 118.04 51.04 37.14 84.50 53.31 35.09 86.31 48.48 47.90 55.87 42 E6a_E7a KnownJunction 1 0.00 62.55 17.53 24.27 37.18 83.36 39.66 26.33 32.81 24.87 41.96 76.37 99.02 78.11 26.70 0.00 48.06 16.62 4.80 35.67 8.34 0.00 16.99 43 E6a_E9a KnownJunction 0 7.11 30.78 6.42 17.38 11.80 13.69 13.91 6.65 23.76 19.21 33.43 57.02 28.24 45.44 17.80 20.42 26.46 12.44 37.93 40.59 47.07 50.58 50.79 44 E7_Aa NovelBoundary 0 2.89 12.43 5.29 3.80 3.82 10.11 10.11 4.27 4.60 3.92 4.69 11.85 6.82 17.13 6.30 19.91 12.44 4.27 0.00 8.82 0.00 3.12 0.00 45 ER7a ExonRegion 1 6.16 70.62 15.34 37.91 35.60 104.47 48.42 27.50 42.29 33.64 58.57 63.63 79.02 78.65 17.41 20.44 58.12 21.22 7.72 69.57 7.48 2.71 12.19 46 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E7a_E9a KnownJunction 1 10.59 113.60 9.64 36.76 36.16 152.64 60.41 24.64 46.59 40.48 69.75 22.96 75.32 81.11 15.33 35.46 53.95 19.57 9.32 94.34 6.30 5.45 7.94 48 ER8a ExonRegion 0 1.17 4.75 2.02 1.13 2.97 3.05 3.61 3.38 1.88 3.71 1.07 3.06 14.99 2.22 1.14 0.00 3.66 0.00 3.53 7.05 2.83 0.36 0.64 49 E8a_E9a KnownJunction 0 0.00 6.38 0.00 0.00 0.00 0.00 1.63 2.42 1.24 1.58 0.00 6.30 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 2.88 4.10 50 ER9a ExonRegion 0 16.16 105.82 32.93 56.74 50.68 144.73 82.54 51.62 100.33 78.79 103.40 177.06 126.77 116.79 53.04 57.75 96.66 80.32 32.84 107.15 61.38 54.14 50.84 51 E9a_E10a KnownJunction 0 21.71 63.67 26.31 61.93 63.16 211.36 97.60 68.18 106.57 71.13 104.45 108.04 153.89 133.32 42.28 80.49 58.53 78.18 65.70 105.40 62.77 61.60 52.58 52 E9a_E11a NovelJunction 0 0.00 9.01 1.24 4.83 0.00 8.69 8.39 4.39 1.22 3.98 4.37 6.00 0.00 4.94 0.00 0.00 4.68 3.94 16.94 5.62 3.15 8.45 0.00 53 E10_Aa NovelBoundary 0 25.26 13.55 6.50 7.42 16.64 2.16 18.81 9.32 6.28 6.26 0.00 0.00 0.00 4.71 5.19 0.00 0.00 14.59 18.82 22.63 0.00 0.00 0.00 54 ER10a ExonRegion 0 30.74 144.92 41.79 65.86 69.84 161.45 96.07 69.88 111.65 88.60 122.72 157.80 127.89 102.84 62.63 65.71 78.98 83.53 56.66 125.97 38.52 68.80 39.83 55 E10b_E11a KnownJunction 0 30.38 290.41 46.98 72.75 51.02 170.47 121.89 105.68 121.41 96.25 101.71 197.91 101.94 119.25 47.96 42.98 77.79 69.48 56.19 143.88 31.57 71.15 27.32 56 ER10b ExonRegion 0 23.28 227.08 39.21 62.24 40.14 185.82 104.15 92.76 123.92 92.52 108.89 194.83 123.50 115.85 37.72 51.52 92.43 71.45 50.97 130.50 36.73 75.70 40.13 57 ER11a ExonRegion 0 20.79 156.09 44.45 69.32 84.40 206.53 98.53 83.32 128.16 112.00 110.18 214.45 139.52 111.67 69.85 54.55 96.03 76.22 52.54 128.04 33.04 73.53 48.28 58 E11a_E12a KnownJunction 0 16.67 85.58 53.96 102.78 173.85 197.50 106.56 77.38 128.70 123.54 98.71 262.29 163.14 124.61 88.26 64.51 107.06 116.15 48.85 152.25 33.24 55.23 51.22 59 ER12a ExonRegion 0 45.29 137.48 59.56 62.94 69.83 160.56 86.57 76.08 115.26 102.60 103.29 172.11 112.26 152.47 54.52 62.19 79.18 115.97 51.66 127.82 55.36 53.26 60.91 60 E12a_E13a KnownJunction 0 55.12 208.12 47.81 60.27 53.40 224.64 101.31 82.48 105.67 82.28 93.71 65.72 122.56 182.41 69.60 80.75 79.57 162.66 79.63 141.38 73.82 45.19 84.68 61 ER13a ExonRegion 0 25.64 89.39 41.88 55.48 34.70 121.85 59.11 48.85 83.15 82.82 94.59 52.84 42.68 133.28 50.28 67.38 66.18 125.11 46.51 112.58 70.75 39.11 53.14 62 E13a_E14a KnownJunction 1 37.71 107.42 50.00 61.50 79.71 113.57 72.03 43.54 88.16 97.43 151.78 57.92 19.64 128.38 36.71 78.18 81.63 194.50 83.01 148.10 89.39 49.84 61.97 63 ER14a ExonRegion 0 31.62 88.20 47.24 66.01 55.51 104.60 61.47 48.91 90.77 99.31 111.08 61.38 51.59 133.08 49.78 74.94 47.77 193.22 64.21 114.02 73.98 49.60 74.39 64 E14a_E15a KnownJunction 0 41.34 96.56 35.39 76.31 40.66 123.91 74.94 62.47 99.13 97.03 91.29 61.97 51.62 129.08 50.19 52.98 42.82 152.05 54.40 132.63 80.37 87.50 55.23 65 E15_Aa NovelBoundary 0 28.15 3.35 7.84 7.26 0.00 0.00 6.36 2.01 1.27 0.00 4.90 0.00 0.00 2.47 6.30 0.00 0.00 0.00 4.80 3.26 0.00 0.00 4.27 66 ER15a ExonRegion 0 22.85 112.97 42.00 61.90 59.78 160.68 77.73 57.04 87.54 94.56 102.65 50.69 46.22 113.99 62.31 57.11 58.26 120.64 32.16 105.82 60.72 73.65 40.17 67 E15_Da NovelBoundary 0 14.22 29.21 19.22 37.26 26.15 66.78 37.27 17.09 35.59 37.98 23.80 27.61 42.85 24.49 13.47 19.48 21.04 31.71 7.15 43.78 9.51 20.70 19.21 68 E15b_E16a KnownJunction 0 30.01 87.22 35.39 66.33 100.68 130.15 71.28 62.23 71.82 82.47 132.61 39.01 56.00 98.48 37.46 96.56 65.83 68.98 16.57 98.50 37.44 76.79 34.40 69 ER15b ExonRegion 0 31.14 97.03 44.11 69.51 81.80 142.77 73.01 53.09 75.17 80.77 117.63 44.53 69.01 100.46 48.49 88.31 62.25 75.76 17.29 100.61 37.78 65.18 38.60 70 E16_Aa NovelBoundary 0 3.78 11.71 12.27 18.31 27.67 20.27 20.89 16.72 11.72 10.31 2.63 0.00 0.00 0.00 4.45 3.33 4.02 3.98 0.00 0.00 0.00 2.27 0.00 71 ER16a ExonRegion 0 32.22 88.44 71.36 98.34 81.79 161.50 86.48 61.90 101.72 103.94 102.89 87.31 65.14 114.79 57.28 69.65 43.46 80.13 43.25 104.18 39.62 78.71 47.38 72 E16_Da KnownBoundary 0 29.26 105.24 67.44 98.62 82.51 159.57 124.32 60.34 138.48 112.42 96.13 94.08 42.04 125.79 84.06 45.37 29.36 67.15 48.28 76.57 19.52 120.45 43.96 73 ER16b ExonRegion 0 64.37 129.76 71.81 88.36 93.52 175.78 92.49 92.15 115.04 108.62 54.96 114.55 80.77 74.82 63.49 39.56 35.67 47.68 42.37 76.12 19.33 70.18 37.91 74 ER16c ExonRegion 0 2.12 0.00 0.61 0.00 0.00 0.00 0.00 0.00 1.24 1.72 0.00 2.16 0.00 0.81 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 75 IG48_AR3 ActiveIntergenicRegion 0 17.07 26.34 3.95 8.00 38.22 13.74 16.29 15.72 6.92 7.77 2.12 3.78 11.39 0.00 3.32 7.31 2.15 11.17 0.00 16.48 0.00 2.15 4.66 76 IG48_AR2 ActiveIntergenicRegion 0 8.39 13.59 4.12 10.46 15.24 7.91 16.07 16.01 8.75 10.83 4.19 10.38 5.00 2.61 3.67 4.26 6.36 8.92 4.25 11.94 0.65 1.75 1.31 77 IG48_SR1 SilentIntergenicRegion 0 4.41 12.70 8.57 4.23 4.18 4.77 8.96 16.09 6.70 15.12 11.06 28.23 18.09 10.84 18.92 7.73 15.46 13.41 9.95 18.80 4.59 3.25 1.53