Distributions of all expression values and Top 1% of expressed ActiveIntronRegion features for libraries: MDS019_T1, MDS019_T2, MDS019_T3
Download data matrix file (ActiveIntronRegion x library): ActiveIntronRegionExpression_v60.txt.gz
Distribution of log2 expression values for library: MDS019_T1 and data type: ActiveIntronRegion
Distribution of all expression values for the feature type: ActiveIntronRegion. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Distribution of log2 expression values for library: MDS019_T2 and data type: ActiveIntronRegion
Distribution of all expression values for the feature type: ActiveIntronRegion. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Distribution of log2 expression values for library: MDS019_T3 and data type: ActiveIntronRegion
Distribution of all expression values for the feature type: ActiveIntronRegion. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Top 1% of expressed ActiveIntronRegion features
The following table provides a ranked list of the most highly expressed ActiveIntronRegion features. Each column corresponds to an expression library. Each table cell contains the Gene Name (which links to the ALEXA-Seq gene record), followed by the Feature Name (which links to the feature's coordinates in the UCSC Genome Browser and displays expression data), the log2 expression value 'Exp' for the feature, and the percent expression value '% Exp' ([feature expression/gene expression]*100). For Gene records the percent displayed here represents the percentage of all reads for the library instead. Features that are NOT supported by an EST/mRNA sequence are indicated in bold. For exon junction features the number of exons skipped by the junction is indicated as 'Sn', where n is the number of exons skipped (e.g. S0 means no exons skipped, S1 means one exon skipped, etc.).
RANK | MDS019_T1 (Gene | Feature | Exp | % Exp) | MDS019_T2 (Gene | Feature | Exp | % Exp) | MDS019_T3 (Gene | Feature | Exp | % Exp) |
1 | AB019439.3 | I4_AR81 | 9.63 | 1171.05% | NUCB2 | I1_AR2 | 10.34 | 62.48% | ADRM1 | I5_AR1 | 10.29 | 120.50% |
2 | NUCB2 | I1_AR2 | 9.44 | 30.57% | C1orf186 | I6_AR1 | 9.99 | 1078.62% | NUP214 | I33_AR2 | 9.73 | 768.48% |
3 | AC129510.2 CCDC57 | Ix_AR2 | 9.37 | 3638.67% | AC129510.2 CCDC57 | Ix_AR2 | 9.92 | 3590.59% | MAPK8IP3 | I1_AR2 | 9.33 | 1111.43% |
4 | SOD2 | I5_AR3 | 9.35 | 208.63% | AP000944.1 | I1_AR1 | 9.52 | 79.86% | IFI16 | I2_AR1 | 9.31 | 77.07% |
5 | NUMA1 | I2_AR4 | 9.16 | 207.90% | NUP214 | I33_AR2 | 9.52 | 640.34% | H2AFX | I1_AR1 | 9.26 | 78.13% |
6 | C1orf186 | I6_AR1 | 8.89 | 881.09% | NUMA1 | I2_AR4 | 9.47 | 218.74% | PTP4A3 | I1_AR7 | 9.19 | 91.98% |
7 | H2AFX | I1_AR1 | 8.87 | 70.14% | FOSB | I1_AR4 | 9.41 | 107.59% | AC104597.1 | I1_AR1 | 9.17 | 31073.91% |
8 | AB019439.3 | I1_AR2 | 8.58 | 566.50% | DDX5 | I12_AR1 | 9.36 | 23.36% | SOD2 | I5_AR3 | 8.93 | 206.91% |
9 | AC104597.1 | I1_AR1 | 8.56 | 4739.33% | ACADVL | I10_AR1 | 9.22 | 55.21% | NUCB2 | I1_AR2 | 8.89 | 36.61% |
10 | SNRPD3 | I4_AR1 | 8.49 | 32.24% | SFRS4 | I1_AR3 | 9.00 | 204.81% | MOBKL1B | I9_AR1 | 8.83 | 126.29% |
11 | AP000944.1 | I1_AR1 | 8.48 | 71.85% | AC104597.1 | I1_AR1 | 8.94 | 2691.89% | AC129510.2 CCDC57 | Ix_AR2 | 8.77 | 5229.11% |
12 | AB019439.3 | I6_AR26 | 8.47 | 523.59% | AC004687.1 | I2_AR1 | 8.80 | 617.55% | AB019439.3 | I6_AR26 | 8.70 | 3987.33% |
13 | TAOK3 | I1_AR2 | 8.46 | 65.60% | TAOK3 | I1_AR2 | 8.76 | 88.68% | AC012652.2 | I4_AR8 | 8.60 | 161.87% |
14 | AB019439.3 | I6_AR27 | 8.45 | 517.20% | HNRNPH1 | I5_AR1 | 8.75 | 56.98% | AB019439.3 | I6_AR27 | 8.56 | 3632.88% |
15 | SOD2 | I5_AR1 | 8.45 | 111.25% | FOSB | I1_AR2 | 8.72 | 66.96% | C11orf48 | I4_AR1 | 8.46 | 59.38% |
16 | MOBKL1B | I9_AR1 | 8.35 | 123.83% | AB019439.3 | I6_AR27 | 8.64 | 583.05% | TCF4 AC091103.1 | Ix_AR1 | 8.41 | 36.54% |
17 | AC012652.2 | I4_AR8 | 8.34 | 147.77% | AB019439.3 | I6_AR11 | 8.64 | 581.18% | RP11-549K20.1 | I1_AR3 | 8.38 | 192.44% |
18 | SFRS4 | I1_AR3 | 8.30 | 121.57% | ZNF185 | I5_AR1 | 8.62 | 175.58% | PPP1R14B | I1_AR3 | 8.19 | 22.90% |
19 | RP11-549K20.1 | I1_AR3 | 8.24 | 314.70% | AB019439.3 | I6_AR20 | 8.60 | 564.43% | SNRPD3 | I4_AR1 | 8.18 | 27.49% |
20 | KIF2A | I24_AR1 | 8.24 | 90.78% | AP000944.1 | I2_AR1 | 8.58 | 41.46% | NUMA1 | I2_AR4 | 8.16 | 194.60% |
21 | RALBP1 | I4_AR1 | 8.18 | 125.09% | AB019439.3 | I6_AR15 | 8.54 | 541.36% | NCLP1 SNHG7 | Ix_AR1 | 8.12 | 1372.31% |
22 | FOSB | I1_AR4 | 8.15 | 49.85% | AB019439.3 | I6_AR26 | 8.51 | 531.14% | NDE1 | I11_AR1 | 8.08 | 174.25% |
23 | SOD2 | I5_AR2 | 8.12 | 88.60% | RP4-781K5.2 IRF2BP2 | Ix_AR1 | 8.49 | 49.27% | RP11-549K20.1 | I1_AR2 | 7.97 | 144.25% |
24 | AB019439.3 | I1_AR1 | 8.08 | 399.02% | RP4-781K5.2 IRF2BP2 | Ix_AR1 | 8.48 | 48.89% | RNF167 | I1_AR1 | 7.93 | 40.18% |
25 | HNRNPH1 | I5_AR1 | 8.07 | 44.60% | RP11-549K20.1 | I1_AR3 | 8.47 | 237.83% | SORL1 | I30_AR1 | 7.90 | 28.97% |
26 | KHSRP | I20_AR1 | 7.98 | 50.08% | EWSR1 | I9_AR2 | 8.44 | 60.35% | TSPAN16 | I6_AR3 | 7.89 | 3721.73% |
27 | MYST1 | I3_AR2 | 7.91 | 126.80% | AB019439.3 | I7_AR25 | 8.30 | 458.51% | KIF2A | I24_AR1 | 7.87 | 94.97% |
28 | SLC25A15 | I8_AR2 | 7.85 | 131.22% | AB019439.3 | I6_AR14 | 8.29 | 457.20% | RCBTB2 | I14_AR1 | 7.86 | 33.69% |
29 | AL031670.1 | I1_AR1 | 7.84 | 147.40% | SOD2 | I5_AR3 | 8.29 | 130.41% | ARHGEF10 | I31_AR2 | 7.75 | 665.39% |
30 | RP11-549K20.1 | I1_AR2 | 7.79 | 229.63% | HNRNPH1 | I4_AR1 | 8.26 | 40.61% | RP11-149B7.3 | I1_AR1 | 7.71 | 51.97% |
31 | KIF22 | I11_AR1 | 7.78 | 60.59% | FOSB | I1_AR3 | 8.25 | 48.22% | PAFAH1B2 | I6_AR1 | 7.70 | 106.31% |
32 | SFPQ | I10_AR1 | 7.76 | 28.81% | AB019439.3 | I6_AR6 | 8.24 | 439.78% | NDE1 | I11_AR2 | 7.64 | 128.87% |
33 | AB019439.3 | I6_AR11 | 7.75 | 318.16% | ARHGEF10 | I31_AR2 | 8.22 | 1344.91% | KHSRP | I20_AR1 | 7.63 | 47.89% |
34 | RP11-1148L6.5 | I1_AR1 | 7.71 | 244.07% | H2AFX | I1_AR1 | 8.19 | 57.63% | RP11-35J23.1 | I2_AR1 | 7.63 | 1270.81% |
35 | SFPQ | I9_AR1 | 7.70 | 27.66% | AB019439.3 | I4_AR81 | 8.19 | 425.74% | CEACAM21 | I2_AR6 | 7.56 | 204.78% |
36 | RP11-149B7.3 | I1_AR1 | 7.66 | 57.87% | CEACAM21 | I2_AR6 | 8.18 | 245.70% | AB019439.3 | I1_AR2 | 7.51 | 1738.12% |
37 | C16orf72 | I3_AR2 | 7.65 | 498.72% | SNRPD3 | I4_AR1 | 8.17 | 25.36% | PAG1 | I9_AR1 | 7.42 | 86.09% |
38 | C11orf48 | I4_AR1 | 7.61 | 44.27% | RP11-549K20.1 | I1_AR2 | 8.13 | 187.66% | AL136219.2 RP11-149B7.3 | Ix_AR1 | 7.37 | 41.04% |
39 | AB019439.3 | I4_AR1 | 7.55 | 276.01% | VIM RP11-124N14.3 | Ix_AR1 | 8.12 | 39.53% | C1orf186 | I6_AR1 | 7.34 | 855.40% |
40 | ZNF28 ZNF160 | Ix_AR1 | 7.52 | 315.83% | RP11-814P23.1 RP11-472B18.2 | Ix_AR1 | 8.08 | 355.54% | AB019439.3 | I6_AR11 | 7.33 | 1539.69% |
41 | AL136219.2 RP11-149B7.3 | Ix_AR1 | 7.51 | 52.33% | AL031670.1 | I1_AR1 | 8.07 | 146.97% | SOD2 | I5_AR1 | 7.30 | 66.66% |
42 | AC112504.1 AC133435.2 | Ix_AR1 | 7.51 | 106.68% | MYST1 | I3_AR2 | 8.07 | 129.36% | RP11-814P23.1 RP11-472B18.2 | Ix_AR1 | 7.28 | 261.33% |
43 | C14orf45 | I18_AR1 | 7.50 | 1737.26% | AL136219.2 RP11-149B7.3 | Ix_AR1 | 8.06 | 77.09% | CHD8 | I2_AR1 | 7.28 | 122.95% |
44 | EWSR1 | I9_AR2 | 7.49 | 34.69% | AC012652.2 | I4_AR8 | 8.06 | 158.10% | AB019439.3 | I6_AR15 | 7.25 | 1455.06% |
45 | OVOL2 SNX5 | Ix_AR3 | 7.48 | 127.19% | ESYT2 | I3_AR3 | 8.02 | 76.17% | RALBP1 | I4_AR1 | 7.25 | 47.78% |
46 | TRA2B | I3_AR1 | 7.38 | 46.66% | RALBP1 | I4_AR1 | 8.00 | 122.89% | SOD2 | I5_AR2 | 7.24 | 64.01% |
47 | NDE1 | I11_AR1 | 7.38 | 161.78% | AB019439.3 | I6_AR16 | 7.98 | 368.82% | APOLD1 | I1_AR4 | 7.22 | 559.36% |
48 | NAALADL1 | I10_AR1 | 7.36 | 273.06% | FOSB | I1_AR1 | 7.98 | 39.84% | C16orf72 | I3_AR2 | 7.16 | 296.79% |
49 | FOSB | I1_AR2 | 7.33 | 28.22% | AB019439.3 | I1_AR2 | 7.98 | 366.49% | APOLD1 | I1_AR3 | 7.13 | 523.65% |
50 | NCLP1 SNHG7 | Ix_AR1 | 7.31 | 571.43% | TCF4 AC091103.1 | Ix_AR1 | 7.97 | 49.36% | AB019439.3 | I6_AR14 | 7.11 | 1315.98% |
51 | AB019439.3 | I6_AR15 | 7.30 | 231.37% | SFPQ | I10_AR1 | 7.94 | 36.53% | AB019439.3 | I6_AR25 | 7.10 | 1313.85% |
52 | AB019439.3 | I6_AR20 | 7.28 | 228.19% | KHSRP | I20_AR1 | 7.93 | 51.80% | TSPAN16 | I3_AR1 | 7.09 | 2125.77% |
53 | C19orf42 | I9_AR4 | 7.25 | 113.05% | ETS2 | I3_AR1 | 7.93 | 77.33% | AB019439.3 | I6_AR13 | 7.06 | 1270.38% |
54 | AP000944.1 | I2_AR1 | 7.24 | 30.29% | AB019439.3 | I6_AR5 | 7.93 | 354.66% | FBXL14 | I1_AR1 | 7.05 | 179.58% |
55 | AB019439.3 | I6_AR6 | 7.23 | 220.97% | SF1 | I3_AR3 | 7.90 | 37.78% | AB019439.3 | I1_AR1 | 7.00 | 1219.27% |
56 | SF1 | I3_AR3 | 7.20 | 23.13% | C13orf15 | I2_AR5 | 7.86 | 259.67% | POU4F1 RP11-52L5.4 | Ix_AR1 | 6.98 | 23.68% |
57 | IFI16 | I2_AR1 | 7.18 | 61.51% | SRRM2 | I13_AR1 | 7.86 | 21.35% | SYVN1 | I2_AR1 | 6.97 | 76.02% |
58 | PAFAH1B2 | I6_AR1 | 7.17 | 91.06% | NAALADL1 | I10_AR1 | 7.80 | 371.89% | AB019439.3 | I6_AR20 | 6.96 | 1191.89% |
59 | UNK | I2_AR5 | 7.17 | 183.93% | CUL4B | I5_AR1 | 7.79 | 211.03% | DIMT1L KIF2A | Ix_AR1 | 6.96 | 50.41% |
60 | AB019439.3 | I6_AR14 | 7.17 | 211.30% | PPIL3 CLK1 | Ix_AR1 | 7.78 | 120.06% | PTPN1 | I9_AR1 | 6.94 | 33.94% |
61 | SF1 | I5_AR1 | 7.17 | 22.65% | AB019439.3 | I6_AR24 | 7.76 | 315.40% | AB019439.3 | I6_AR28 | 6.94 | 1172.31% |
62 | CHD8 | I2_AR1 | 7.14 | 103.04% | HNRNPH1 | I3_AR1 | 7.76 | 28.60% | C14orf126 | I1_AR1 | 6.92 | 156.70% |
63 | AL160400.1 | I1_AR3 | 7.14 | 89.17% | AL590431.1 TPM3 | Ix_AR7 | 7.76 | 42.67% | ESYT2 | I3_AR3 | 6.92 | 27.26% |
64 | HNRNPH1 | I4_AR1 | 7.12 | 22.99% | LAIR1 | I1_AR1 | 7.75 | 30.19% | AL031670.1 | I1_AR1 | 6.92 | 132.56% |
65 | C13orf15 | I2_AR5 | 7.11 | 156.90% | RCSD1 | I12_AR1 | 7.74 | 61.90% | AB019439.3 | I6_AR5 | 6.91 | 1148.32% |
66 | CLU | I3_AR2 | 7.09 | 88.89% | CTC-458I2.2 SERINC5 | Ix_AR2 | 7.71 | 470.36% | AB019439.3 | I7_AR25 | 6.91 | 1146.09% |
67 | APOLD1 | I1_AR4 | 7.08 | 766.33% | C19orf42 | I9_AR4 | 7.70 | 194.69% | AB019439.3 | I5_AR1 | 6.90 | 1141.06% |
68 | FOSB | I1_AR1 | 7.08 | 23.72% | KIF22 | I11_AR1 | 7.70 | 70.63% | ZNF185 | I5_AR1 | 6.89 | 95.01% |
69 | ILF3 | I11_AR1 | 7.02 | 25.39% | LMO4 | I1_AR2 | 7.69 | 96.95% | AB019439.3 | I6_AR6 | 6.87 | 1119.28% |
70 | APOLD1 | I1_AR3 | 7.02 | 732.91% | SFPQ | I9_AR1 | 7.68 | 30.32% | TIPRL | I8_AR1 | 6.85 | 41.84% |
71 | AB019439.3 | I6_AR13 | 7.01 | 189.56% | AB019439.3 | I6_AR19 | 7.66 | 295.18% | AB019439.3 | I6_AR24 | 6.83 | 1087.60% |
72 | C14orf126 | I1_AR1 | 7.01 | 151.48% | MOBKL1B | I9_AR1 | 7.66 | 101.22% | UNK | I2_AR7 | 6.83 | 178.08% |
73 | RNF167 | I1_AR1 | 7.00 | 23.52% | SORL1 | I30_AR1 | 7.65 | 27.96% | MED1 | I17_AR1 | 6.82 | 65.22% |
74 | C16orf72 | I3_AR1 | 6.99 | 314.61% | FOSB | I3_AR1 | 7.63 | 31.25% | RP11-25K19.1 | I2_AR1 | 6.79 | 54.59% |
75 | H2AFV | I5_AR6 | 6.97 | 26.25% | NXF1 | I10_AR1 | 7.62 | 31.63% | RAB11FIP1 | I1_AR8 | 6.77 | 353.31% |
76 | DIMT1L KIF2A | Ix_AR1 | 6.95 | 36.95% | RP11-1148L6.5 | I1_AR1 | 7.61 | 285.40% | AB019439.3 | I6_AR19 | 6.75 | 1026.67% |
77 | AB019439.3 | I6_AR5 | 6.95 | 181.61% | TSC22D3 | I8_AR2 | 7.60 | 30.89% | RP11-1148L6.5 | I1_AR1 | 6.75 | 199.10% |
78 | PSMA3 | I7_AR4 | 6.95 | 20.88% | EPHX1 RP11-285F7.2 | Ix_AR1 | 7.59 | 227.63% | DYRK3 | I5_AR2 | 6.75 | 95.75% |
79 | PPIL3 CLK1 | Ix_AR2 | 6.94 | 100.22% | KIF2A | I24_AR1 | 7.58 | 85.67% | TAS2R14 | I1_AR1 | 6.74 | 279.40% |
80 | H2AFV | I5_AR7 | 6.93 | 25.56% | TSPAN16 | I6_AR3 | 7.53 | 4237.06% | PRR19 | I1_AR2 | 6.72 | 2289.17% |
81 | AB019439.3 | I6_AR24 | 6.92 | 178.13% | NDE1 | I11_AR1 | 7.52 | 159.15% | WIBG | I3_AR1 | 6.70 | 24.08% |
82 | AB019439.3 | I2_AR3 | 6.92 | 177.92% | AC112504.1 AC133435.2 | Ix_AR1 | 7.52 | 157.75% | PHF20 | I1_AR2 | 6.68 | 147.96% |
83 | UNK | I2_AR7 | 6.90 | 152.82% | LLGL2 | I17_AR1 | 7.51 | 500.11% | MYST1 | I3_AR2 | 6.68 | 66.35% |
84 | AB019439.3 | I6_AR16 | 6.90 | 175.60% | PPIL3 CLK1 | Ix_AR2 | 7.51 | 99.16% | DYRK3 | I5_AR7 | 6.66 | 90.21% |
85 | FOSB | I1_AR3 | 6.89 | 20.80% | RP11-488L18.4 | I1_AR2 | 7.49 | 84.50% | AB019439.3 | I6_AR16 | 6.63 | 943.01% |
86 | NDE1 | I11_AR2 | 6.87 | 113.60% | AB019439.3 | I6_AR13 | 7.48 | 260.00% | AC025260.4 | I3_AR1 | 6.63 | 54.79% |
87 | MED1 | I17_AR1 | 6.86 | 65.93% | EDEM1 | I3_AR2 | 7.47 | 27.80% | VPRBP | I28_AR1 | 6.62 | 120.65% |
88 | RP11-1148L6.5 | I1_AR2 | 6.86 | 134.97% | SFPQ | I11_AR1 | 7.45 | 26.01% | TLR1 | I6_AR1 | 6.62 | 167.09% |
89 | MAP7 | I2_AR1 | 6.86 | 50.54% | RP11-35J23.1 | I2_AR1 | 7.45 | 970.66% | C14orf45 | I18_AR1 | 6.61 | 2199.22% |
90 | FNBP1 | I23_AR3 | 6.85 | 37.98% | TRIM56 | I3_AR2 | 7.43 | 214.13% | CUL4B | I5_AR1 | 6.60 | 78.71% |
91 | AB019439.3 | I6_AR25 | 6.85 | 169.48% | CHD8 | I2_AR1 | 7.43 | 117.09% | RP11-549K20.1 | I1_AR1 | 6.59 | 55.08% |
92 | TFRC | I14_AR1 | 6.85 | 24.63% | AB019439.3 | I1_AR1 | 7.43 | 249.89% | C12orf42 | I2_AR3 | 6.58 | 878.46% |
93 | ZFAND5 | I4_AR1 | 6.85 | 50.10% | TSPYL2 | I1_AR1 | 7.42 | 65.85% | SLC12A6 | I2_AR1 | 6.56 | 29.64% |
94 | CUL4B | I5_AR1 | 6.83 | 111.38% | UNK | I2_AR5 | 7.42 | 170.79% | DGKZ | I29_AR1 | 6.53 | 54.36% |
95 | LDB1 | I11_AR1 | 6.83 | 24.13% | CDK5RAP3 | I7_AR1 | 7.41 | 31.87% | ARG2 | I7_AR1 | 6.53 | 231.49% |
96 | FNBP1 | I23_AR5 | 6.82 | 37.08% | ANKRD10 RP11-120J20.2 | Ix_AR1 | 7.41 | 112.29% | CNOT7 | I11_AR1 | 6.52 | 43.75% |
97 | RCSD1 | I12_AR1 | 6.81 | 36.75% | RP11-149B7.3 | I1_AR1 | 7.40 | 48.82% | H2AFV | I5_AR7 | 6.50 | 23.53% |
98 | CD3EAP | I2_AR2 | 6.81 | 164.87% | PDE3B | I1_AR3 | 7.40 | 165.09% | CELF1 | I15_AR1 | 6.50 | 106.12% |
99 | TRA2B | I3_AR2 | 6.80 | 31.10% | LDB1 | I11_AR1 | 7.40 | 41.37% | RUNX1 AF015262.1 | Ix_AR3 | 6.50 | 20.65% |
100 | KIAA0391 | I1_AR1 | 6.79 | 56.76% | ACAP1 | I17_AR1 | 7.39 | 44.37% | CTC-458I2.2 SERINC5 | Ix_AR2 | 6.47 | 435.91% |