Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	MTCP1	Gene	0	11.92	13.57	11.24	10.32	5.11	6.84	8.15	3.55	6.79	4.02	5.49	22.63	5.17	8.16	12.69	9.48	5.67	4.75	6.43	2.78	3.13	2.48	1.57	3.38	4.98	3.88	5.66	4.45	2.68
2	476116	Transcript	0	0.00	0.00	0.52	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	362018	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	330425	Transcript	0	0.54	1.71	0.85	1.01	1.01	0.49	0.66	1.28	0.97	0.16	1.15	1.35	0.08	0.65	1.67	0.63	0.59	0.57	2.28	0.23	0.31	0.50	0.15	0.55	0.46	0.04	0.26	0.73	0.31
5	369476	Transcript	0	12.95	28.34	6.63	13.97	7.51	14.06	10.31	1.69	13.24	5.45	8.17	29.45	4.26	12.06	23.35	20.27	8.52	7.12	9.07	3.63	7.80	1.55	0.93	5.92	5.80	2.21	7.38	3.42	2.85
6	482244	Transcript	0	37.87	17.26	21.28	20.28	0.00	0.00	18.14	10.70	10.35	5.15	1.61	11.51	10.00	15.60	25.51	7.27	1.91	9.25	8.09	4.13	2.05	6.95	2.41	3.05	8.90	6.27	20.77	12.85	5.18
7	ER1a	ExonRegion	0	0.00	0.00	1.05	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	0.02	0.00	0.04	0.00	0.00	0.00	3.52	1.63	0.00	0.00	0.00	0.03	0.05	0.02	0.00	0.00	0.00	1.73	0.00	2.44	0.69	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00
10	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	I1_AR1	ActiveIntronRegion	0	1.25	6.25	1.28	0.00	1.42	0.80	1.17	1.54	6.15	2.52	1.73	6.52	3.38	3.92	11.04	4.96	0.87	0.31	0.96	1.30	4.93	2.63	3.16	1.25	0.42	1.83	11.28	1.43	3.46
13	I1_AR2	ActiveIntronRegion	0	8.81	19.89	10.55	2.40	7.94	8.54	2.79	3.17	9.49	9.32	9.61	26.96	11.98	9.79	9.49	20.90	6.35	4.47	8.86	2.69	19.30	3.10	11.24	4.42	7.65	16.83	33.97	17.22	7.71
14	I1_AR3	ActiveIntronRegion	0	6.99	21.08	3.76	2.24	1.73	9.87	1.20	3.37	4.33	8.34	6.89	12.89	5.17	8.96	3.92	6.76	4.23	3.93	4.62	1.66	17.85	1.82	13.16	4.88	6.26	8.30	18.00	10.41	3.13
15	I1_SR3	SilentIntronRegion	0	4.61	33.09	1.81	8.64	18.12	14.24	1.87	0.69	17.45	9.09	11.29	12.32	6.61	8.76	17.99	21.78	1.44	5.08	10.64	6.52	21.35	1.96	6.08	3.30	8.58	2.56	29.30	7.21	3.01
16	Ix	Intron	0	2.19	1.44	0.75	1.15	1.09	1.10	0.19	0.53	1.09	1.15	0.72	1.32	0.17	1.09	1.32	3.94	1.86	0.82	1.43	0.35	1.51	0.06	0.29	0.69	0.87	0.40	1.23	0.89	0.66
17	Ix_SR1	SilentIntronRegion	0	2.20	1.45	0.75	1.15	1.10	1.10	0.19	0.53	1.10	1.16	0.72	1.32	0.17	1.09	1.32	3.94	1.87	0.82	1.43	0.35	1.51	0.06	0.29	0.69	0.87	0.40	1.23	0.89	0.66
18	Ix_AR2	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.89	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.10	0.00	0.00	0.00
19	Ix	Intron	0	6.57	4.23	1.09	2.34	1.27	2.60	1.31	0.72	1.06	2.64	1.55	3.50	1.01	3.09	3.65	5.11	0.39	1.95	5.83	0.54	2.05	0.24	0.00	3.37	1.03	1.23	1.91	1.91	0.83
20	Ix_AR2	ActiveIntronRegion	0	5.88	3.09	0.00	5.50	0.00	1.98	0.50	2.45	1.54	3.68	0.02	1.89	2.40	2.83	5.64	5.88	0.00	3.08	8.13	0.00	1.14	0.00	0.00	2.47	0.74	0.00	2.81	0.63	0.51
21	Ix_SR2	SilentIntronRegion	0	7.56	5.12	0.59	1.27	1.74	1.03	2.63	0.17	1.18	1.63	1.26	2.41	1.41	3.10	5.54	5.16	0.00	1.77	5.88	0.00	2.51	0.00	0.00	2.68	0.67	0.84	1.30	1.16	0.00
22	Ix_AR1	ActiveIntronRegion	0	6.31	4.43	1.79	2.26	1.14	4.35	0.64	0.58	0.82	3.32	2.63	5.29	0.21	3.53	1.60	5.36	0.93	1.57	5.55	1.31	2.25	0.57	0.00	4.54	1.57	2.23	2.31	3.24	1.80
23	Ix_SR1	SilentIntronRegion	0	4.00	0.00	2.79	0.00	3.50	1.86	0.00	0.00	0.58	0.86	0.00	2.24	0.00	0.32	0.00	0.14	0.11	2.58	0.00	0.00	0.00	0.00	0.00	1.92	0.08	0.00	0.00	0.88	0.00
24	Ix	Intron	0	9.47	3.04	0.69	0.65	1.00	1.97	0.23	0.38	0.74	1.22	1.76	1.88	0.68	3.27	1.07	2.54	0.82	2.79	5.60	1.14	2.11	0.37	0.12	1.57	1.50	1.47	0.50	1.86	0.46
25	Ix_SR1	SilentIntronRegion	0	9.48	3.04	0.69	0.65	1.00	1.97	0.23	0.38	0.74	1.22	1.76	1.88	0.68	3.28	1.07	2.54	0.82	2.79	5.61	1.14	2.11	0.37	0.12	1.57	1.50	1.47	0.50	1.86	0.46
26	Ix	Intron	0	18.47	4.61	1.16	1.49	2.38	4.78	1.54	1.02	4.09	2.31	1.57	6.85	1.48	6.85	4.07	6.51	3.42	8.01	16.20	2.76	8.92	0.88	0.13	2.69	1.69	2.07	1.27	7.25	1.02
27	Ix_SR1	SilentIntronRegion	0	18.52	4.62	1.16	1.50	2.38	4.79	1.54	1.03	4.10	2.31	1.58	6.87	1.49	6.87	4.08	6.53	3.43	8.03	16.25	2.77	8.94	0.88	0.13	2.70	1.69	2.08	1.28	7.27	1.02
28	Ix	Intron	0	17.35	3.48	2.94	5.47	0.37	2.10	2.31	1.69	1.55	1.98	2.18	3.11	0.49	4.77	4.43	6.36	2.17	5.29	10.24	2.20	4.14	0.69	0.55	2.79	2.73	2.04	1.68	7.84	1.33
29	Ix_SR1	SilentIntronRegion	0	24.13	5.60	3.02	2.41	0.77	3.10	3.49	2.03	2.06	2.25	3.16	3.84	0.81	5.93	3.91	7.05	1.88	6.77	11.58	2.41	5.24	1.14	1.12	3.61	3.57	0.99	1.80	9.35	2.10
30	Ix_AR1	ActiveIntronRegion	0	11.02	1.50	2.87	8.40	0.00	1.16	1.20	1.37	1.07	1.75	1.27	2.43	0.19	3.70	4.95	5.76	2.45	3.92	9.03	2.01	3.12	0.27	0.02	2.03	1.95	3.05	1.57	6.46	0.60
31	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E2_Ab	KnownBoundary	0	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.18	0.00	0.00	0.00	3.86	0.00	8.13	0.00
33	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00
34	E2_Ac	KnownBoundary	1	2.42	0.00	0.00	36.67	0.00	0.00	21.34	4.48	7.64	7.47	1.33	1.23	4.59	3.86	23.72	13.46	2.88	0.00	0.00	3.72	2.01	8.99	18.67	0.00	5.23	47.25	4.37	104.02	28.00
35	ER2c	ExonRegion	0	7.92	4.20	8.18	7.49	2.56	0.63	5.19	2.71	1.66	2.02	1.48	5.48	2.75	3.00	3.05	2.02	0.96	1.36	3.57	2.12	0.24	2.40	2.47	0.35	2.98	3.23	3.81	3.76	1.48
36	E2a_E3a	KnownJunction	0	11.62	4.46	6.18	0.00	25.20	0.00	4.41	1.94	4.20	4.99	2.82	18.46	7.64	3.88	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	2.31	0.00	8.33	2.02	0.00	0.00	1.68
37	E2a_E4a	KnownJunction	0	37.87	17.26	21.28	20.28	0.00	0.00	18.14	10.70	10.35	5.15	1.61	11.51	10.00	15.60	25.51	7.27	1.91	9.25	8.09	4.13	2.05	6.95	2.41	3.05	8.90	6.27	20.77	12.85	5.18
38	E2a_E5a	NovelJunction	0	0.00	4.75	0.00	0.00	0.00	1.96	0.00	0.00	3.23	1.84	4.27	0.00	0.00	2.04	19.73	3.82	4.84	0.00	7.87	0.00	0.00	1.90	0.00	0.00	2.99	1.67	0.00	5.80	9.74
39	Ix	Intron	0	12.69	14.67	5.65	5.73	4.60	8.90	2.93	1.00	6.29	5.11	3.45	18.64	0.92	8.71	5.79	9.23	7.75	5.09	6.42	0.83	2.60	0.62	0.31	1.66	3.81	2.53	0.71	2.49	0.45
40	Ix_SR1	SilentIntronRegion	0	11.61	15.86	4.96	5.05	4.48	10.53	3.14	0.71	4.70	5.09	3.12	16.79	0.79	8.27	3.98	8.38	7.56	4.98	6.90	0.82	2.65	0.77	0.19	1.10	3.33	2.41	0.90	2.02	0.54
41	Ix_AR1	ActiveIntronRegion	0	14.87	12.29	7.06	7.11	4.84	5.62	2.52	1.59	9.52	5.15	4.10	22.41	1.17	9.60	9.47	10.95	8.15	5.33	5.47	0.83	2.52	0.31	0.55	2.78	4.79	2.78	0.32	3.44	0.26
42	E3_Aa	NovelBoundary	0	10.15	13.09	6.78	0.00	0.00	1.80	0.00	4.08	4.20	0.00	0.00	19.55	0.00	5.56	8.37	7.04	4.10	0.00	0.00	0.00	5.90	0.00	0.00	5.56	6.36	4.12	0.00	2.16	0.00
43	ER3a	ExonRegion	0	17.66	10.33	14.37	5.15	7.31	4.98	8.08	5.51	6.51	8.07	5.55	33.54	7.29	7.85	8.59	9.59	6.48	5.78	10.57	0.92	1.42	3.64	0.99	3.95	3.74	1.88	0.31	0.64	0.94
44	E3_Da	NovelBoundary	0	8.08	12.60	5.78	0.00	0.00	7.06	0.00	1.99	6.97	5.95	0.00	15.06	0.00	4.74	0.00	0.00	4.66	4.62	24.28	0.00	3.61	0.00	0.00	0.00	12.35	2.10	7.75	0.00	0.00
45	E3a_E4a	KnownJunction	0	15.63	4.36	4.56	0.00	0.00	0.00	8.01	0.00	4.60	9.03	4.71	37.17	12.26	4.39	0.00	10.02	0.00	0.00	16.18	0.00	0.00	0.00	2.51	3.05	5.30	6.44	2.39	0.00	0.00
46	E3a_E6b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	Ix	Intron	0	10.37	6.29	2.94	0.00	4.29	4.23	0.00	1.62	3.70	2.54	1.05	9.77	2.27	4.97	4.06	3.27	1.31	4.23	2.81	1.21	2.51	3.17	0.00	0.95	1.26	0.69	0.00	1.43	0.88
48	Ix_SR1	SilentIntronRegion	0	10.55	6.40	2.99	0.00	4.37	4.30	0.00	1.65	3.75	2.58	1.06	9.94	2.31	5.06	4.13	3.33	1.34	4.31	2.86	1.23	2.54	3.21	0.00	0.96	1.28	0.70	0.00	1.46	0.89
49	E4_Aa	NovelBoundary	0	5.84	3.49	7.95	10.14	14.59	1.53	2.63	0.00	10.02	5.63	3.23	18.37	1.50	11.94	24.91	13.77	17.94	4.62	0.00	4.13	5.54	0.00	0.00	0.00	3.26	0.00	0.00	1.93	3.43
50	ER4a	ExonRegion	0	48.16	28.93	38.23	32.71	11.33	14.72	24.00	18.40	12.92	17.58	13.61	74.50	24.77	31.42	28.92	15.48	16.25	13.93	20.88	7.36	3.66	10.86	7.75	10.01	17.90	15.09	23.66	21.24	8.95
51	E4_Da	NovelBoundary	0	2.71	0.00	0.97	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	1.87	0.00	3.15	7.77	6.58	6.37	0.00	0.00	0.00	2.05	0.00	0.00	2.39	0.00	0.00	0.00	1.71	0.00
52	E4a_E5a	KnownJunction	0	35.10	19.58	27.43	31.71	14.74	21.41	34.50	14.83	24.54	8.83	21.70	52.29	17.58	16.93	46.24	29.22	15.58	9.89	16.18	8.27	5.78	9.77	9.01	10.47	28.38	1.63	15.46	14.15	13.83
53	E4a_E6b	NovelJunction	0	0.00	0.00	0.00	0.00	6.04	0.00	0.00	0.00	1.22	3.75	0.00	4.01	1.37	0.00	8.17	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E5_Aa	NovelBoundary	0	0.00	7.17	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.10	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER5a	ExonRegion	0	46.41	19.33	30.43	27.84	20.12	14.65	25.97	20.61	21.02	9.11	17.53	67.86	19.86	26.79	44.37	16.94	18.71	10.81	16.88	9.35	5.82	9.36	7.72	8.32	23.25	14.93	15.81	21.25	15.28
56	E5a_E6a	KnownJunction	0	61.70	28.70	36.38	19.20	19.90	9.75	18.37	19.31	19.49	10.99	23.47	75.87	26.02	34.81	16.74	13.00	21.72	14.38	32.37	11.33	1.93	1.85	2.31	5.32	19.78	18.11	8.75	20.04	12.15
57	E6_Aa	NovelBoundary	0	5.43	0.00	1.42	0.00	0.00	3.91	0.00	0.00	0.00	4.07	0.00	0.00	0.00	1.04	0.00	10.02	1.35	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	4.18	0.00
58	ER6a	ExonRegion	0	35.84	24.24	31.89	13.98	12.61	15.49	24.52	10.16	16.54	7.69	12.88	76.45	20.47	28.59	35.45	17.88	18.49	11.02	8.19	5.19	4.35	10.43	1.24	8.99	16.72	30.98	14.49	18.22	10.16
59	E6_Da	KnownBoundary	0	5.01	0.00	15.05	10.78	0.00	10.74	2.40	9.46	4.02	13.98	4.46	39.52	9.43	13.69	16.14	7.04	10.08	0.00	8.09	0.00	0.00	4.67	2.46	2.75	5.61	2.02	20.57	9.88	0.00
60	ER6b	ExonRegion	0	15.97	10.10	38.71	10.83	4.79	6.83	12.75	6.44	7.88	4.51	9.41	36.14	10.98	5.74	17.09	8.68	8.11	5.72	6.36	1.78	1.84	4.66	3.64	4.23	5.71	9.32	10.86	7.93	7.43
61	E6_Db	KnownBoundary	0	0.00	0.00	39.69	8.41	12.82	5.03	2.23	0.00	1.55	0.00	12.40	32.53	4.97	2.13	0.00	0.00	6.15	0.00	0.00	0.00	0.00	0.00	2.17	0.00	1.74	17.51	2.29	2.29	0.00
62	ER6c	ExonRegion	0	12.11	12.65	23.00	16.47	6.59	7.48	8.74	1.76	4.81	1.86	7.05	31.43	5.16	6.97	5.63	9.29	6.33	6.32	7.13	4.78	2.83	2.26	0.98	1.63	6.99	4.48	4.81	3.77	1.91
63	E6_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E6c_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E6_Dd	KnownBoundary	0	22.83	35.77	12.31	21.14	0.00	12.66	18.19	7.22	8.95	0.00	4.81	45.42	7.52	15.53	0.00	3.06	3.85	4.50	8.09	8.19	2.05	4.91	0.00	5.86	10.53	2.15	2.48	13.34	1.52
66	ER6d	ExonRegion	0	24.29	31.75	28.30	20.31	0.00	17.41	14.78	7.36	11.98	1.44	14.15	65.69	12.99	26.61	0.00	32.90	11.69	25.78	6.03	12.49	2.85	3.81	0.00	4.30	16.99	5.41	5.09	13.04	4.62
67	ER6e	ExonRegion	0	12.95	28.34	6.63	13.97	7.51	14.06	10.31	1.69	13.24	5.45	8.17	29.45	4.26	12.06	23.35	20.27	8.52	7.12	9.07	3.63	7.80	1.55	0.93	5.92	5.80	2.21	7.38	3.42	2.85
68	E6e_E6b	NovelJunction	0	22.95	60.01	4.88	10.35	7.37	8.48	2.86	2.39	9.14	5.87	5.44	25.45	1.62	17.13	8.97	3.82	15.42	4.62	24.28	3.06	5.62	0.00	2.41	11.01	7.24	4.12	0.00	6.60	0.00
69	ER6f	ExonRegion	0	1.83	7.34	2.08	0.00	3.66	2.06	1.60	5.04	4.15	0.00	4.22	5.02	0.27	2.76	3.46	2.57	1.56	2.17	10.72	0.00	1.41	2.15	0.59	1.52	2.10	0.00	0.00	2.23	1.11
70	E6f_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
71	Ix_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
72	Ix_SR1	SilentIntronRegion	0	0.93	0.80	0.00	0.00	0.00	0.40	0.00	0.00	0.32	0.00	0.33	0.89	0.00	1.17	3.46	3.17	1.07	0.56	4.15	0.40	1.24	0.00	0.00	0.29	1.03	0.45	0.00	0.47	0.87
73	ER7a	ExonRegion	0	0.86	1.21	2.19	5.04	1.37	0.39	1.68	1.38	0.71	0.81	1.55	1.75	0.13	0.50	4.91	0.56	1.38	0.68	0.69	1.16	0.14	0.36	0.14	1.23	0.21	0.22	1.29	1.42	0.45