Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TAF9B	Gene	0	129.25	150.74	56.47	211.97	172.52	128.59	159.52	192.70	94.45	90.10	121.59	156.78	66.73	66.54	130.38	88.29	118.33	58.90	285.40	44.62	70.24	52.51	59.68	95.56	48.45	21.02	114.36	122.10	138.14
2	341864	Transcript	0	205.00	137.14	138.94	553.97	361.75	122.49	265.66	209.82	94.18	153.23	142.18	163.83	113.16	74.76	153.73	79.65	125.03	47.43	244.08	64.86	64.08	69.67	133.05	100.20	116.91	58.64	164.78	229.45	191.19
3	480681	Transcript	0	5.56	2.00	6.79	5.74	3.03	5.78	6.43	7.69	1.56	1.90	2.92	2.60	1.35	2.43	5.18	2.02	7.86	2.11	8.19	5.80	1.01	2.24	1.63	2.10	1.45	1.45	4.10	5.96	4.20
4	IG44_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	0.00
5	ER1a	ExonRegion	1	61.38	27.67	64.24	224.89	201.02	30.40	50.87	79.30	3.12	21.47	29.14	58.70	14.46	11.63	26.95	43.14	28.43	19.94	35.78	6.94	13.59	22.04	24.78	4.00	16.26	8.21	30.86	88.98	38.92
6	E1_Ab	KnownBoundary	1	98.27	28.31	162.99	289.67	136.17	65.76	67.00	158.40	1.37	29.12	56.94	121.80	44.84	23.15	8.77	71.76	83.85	27.74	56.65	6.53	34.98	22.66	49.20	9.63	28.49	12.79	84.83	159.96	129.71
7	ER1b	ExonRegion	1	131.24	85.78	219.78	366.95	287.46	74.80	234.16	259.44	33.93	138.29	148.00	186.73	114.33	63.00	26.81	103.30	188.65	28.28	102.09	27.46	39.85	68.80	132.36	39.57	34.61	89.81	171.05	514.83	538.23
8	E1a_E2a	KnownJunction	0	32.21	25.59	170.17	114.32	52.17	59.93	143.27	144.17	45.34	41.70	25.18	92.98	81.65	43.14	8.37	42.61	208.37	18.49	32.37	8.27	21.66	21.39	31.77	21.65	10.57	30.86	39.81	177.79	470.05
9	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	0.00	0.00	3.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	1	142.25	30.65	51.41	99.52	61.42	62.20	56.98	303.44	35.57	29.46	33.64	67.94	55.89	49.16	26.02	24.07	73.69	23.86	75.95	24.64	29.47	59.27	25.96	30.56	35.65	18.17	27.90	88.38	201.24
11	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2a_E3a	KnownJunction	0	273.57	88.52	17.81	121.22	81.94	101.98	98.41	408.18	42.27	78.09	44.10	81.35	49.20	74.93	87.50	44.83	53.05	65.50	129.48	33.74	52.58	100.59	42.21	49.89	56.37	10.64	60.98	62.14	79.20
13	E3_Aa	NovelBoundary	0	11.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00
14	ER3a	ExonRegion	1	200.94	112.74	76.63	165.10	142.97	102.74	217.63	389.72	48.90	129.18	159.07	181.40	108.24	91.17	47.75	93.99	160.19	46.73	162.63	38.55	52.15	89.23	115.90	70.00	54.29	60.80	139.16	336.99	395.92
15	E3_Da	KnownBoundary	0	6.02	0.00	2.42	0.00	0.00	1.88	7.50	2.34	1.55	0.00	0.00	0.00	0.00	2.61	27.11	3.67	7.00	0.00	0.00	11.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.74	1.45
16	E3a_E3b	KnownJunction	0	456.96	215.04	324.17	1239.58	714.60	196.94	590.80	434.75	163.86	355.16	279.40	274.60	262.78	149.82	276.06	103.04	232.14	60.88	372.03	137.78	100.88	150.67	323.42	189.08	293.04	153.59	346.59	515.86	430.13
17	E3a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.20	1.54	0.00	0.00	0.00	0.00	2.34	0.00	8.09	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3b	ExonRegion	0	5.56	2.00	6.79	5.74	3.03	5.78	6.43	7.69	1.56	1.90	2.92	2.60	1.35	2.43	5.18	2.02	7.86	2.11	8.19	5.80	1.01	2.24	1.63	2.10	1.45	1.45	4.10	5.96	4.20
19	E3_Ab	KnownBoundary	0	0.00	0.00	6.38	0.00	0.00	10.09	2.46	2.54	0.00	0.00	0.00	0.00	2.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	2.93	1.78	0.00	5.07	0.00	2.05
20	ER3c	ExonRegion	0	289.45	141.55	289.44	396.36	272.94	127.59	179.81	484.64	47.81	112.91	159.36	169.93	79.59	99.23	80.41	64.12	143.66	67.43	240.34	43.84	69.70	111.64	78.85	99.80	79.67	36.22	148.76	209.35	175.36
21	E3_Db	NovelBoundary	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	2.29	0.00
22	E3b_E4a	KnownJunction	0	289.85	172.38	67.69	332.81	217.81	96.42	192.64	491.59	53.38	129.86	159.09	176.89	64.20	80.05	54.61	77.42	167.38	70.12	315.38	29.61	36.26	104.87	88.26	97.86	92.97	30.90	168.92	203.00	159.06
23	I3_AR1	ActiveIntronRegion	0	1.92	0.00	0.00	0.00	2.54	0.59	0.00	0.00	1.23	0.00	0.00	0.00	0.00	1.79	0.00	0.00	0.00	0.19	1.66	0.00	1.95	0.92	0.00	1.84	0.73	0.00	0.00	0.00	0.00
24	I3_SR1	SilentIntronRegion	0	0.69	1.58	0.33	0.00	0.96	1.50	0.20	0.36	0.65	0.71	0.00	0.48	0.00	0.11	3.14	1.22	0.59	1.10	6.27	0.00	0.33	0.53	0.00	0.71	0.14	0.00	0.00	0.64	0.00
25	E4_Aa	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.09	0.00	0.00	2.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.58
26	ER4a	ExonRegion	0	379.96	203.92	72.60	398.64	256.81	203.13	298.81	701.72	78.01	221.69	245.13	266.66	124.91	140.70	124.25	149.18	206.04	113.05	408.16	37.24	98.33	176.12	150.99	123.10	146.04	43.78	129.20	303.36	255.47
27	E4_Da	NovelBoundary	0	0.00	14.54	0.00	0.00	0.00	1.61	0.00	0.00	3.11	2.08	0.00	0.00	0.00	0.00	0.00	6.88	2.59	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E4a_E5a	KnownJunction	0	330.20	187.99	62.91	266.16	130.28	145.26	262.96	691.70	69.92	127.83	177.41	222.29	120.18	124.96	102.25	121.86	165.58	106.21	517.02	30.93	84.47	153.78	100.03	102.58	127.48	20.08	93.58	208.57	235.42
29	E5_Aa	NovelBoundary	0	8.91	9.11	1.42	0.00	0.00	2.95	0.00	1.89	1.16	0.00	0.00	1.23	0.00	2.50	7.57	0.00	3.67	0.00	0.00	11.99	5.82	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
30	ER5a	ExonRegion	0	305.34	159.72	116.04	231.17	138.77	123.65	213.05	553.90	57.52	127.09	171.04	201.26	86.88	97.08	96.47	95.89	147.35	70.56	313.95	45.98	65.32	138.73	86.31	108.06	103.01	37.31	121.15	182.34	170.33
31	E5_Da	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.39	0.00	0.00	0.00	2.35	8.37	0.00	0.00	0.00	8.09	0.00	0.00	1.94	0.00	0.00	0.00	0.00	5.07	0.00	6.64
32	E5a_E6a	KnownJunction	0	239.36	146.98	197.82	213.10	120.11	74.82	159.80	376.58	76.07	94.27	160.17	203.37	65.73	89.38	108.63	95.62	170.53	60.88	226.36	39.36	58.32	133.70	78.80	59.16	98.77	22.49	146.66	141.35	153.61
33	I5	Intron	0	3.62	6.15	0.61	0.53	5.02	2.93	2.52	2.44	7.34	4.14	2.36	3.67	1.90	2.76	4.87	5.13	2.19	2.90	13.85	4.34	3.46	1.19	3.32	4.90	2.63	0.58	2.83	3.95	1.32
34	I5_SR1	SilentIntronRegion	0	3.34	1.25	0.65	0.00	0.00	1.61	0.78	1.43	3.50	1.12	0.00	1.20	0.00	1.23	2.14	0.00	2.32	2.38	3.73	4.29	1.11	0.00	0.00	0.84	1.11	0.00	0.00	0.00	0.00
35	I5_AR1	ActiveIntronRegion	0	3.70	7.32	0.61	0.65	6.21	3.25	2.93	2.68	8.26	4.85	2.92	4.26	2.35	3.12	5.53	6.35	2.17	3.04	16.25	4.37	4.02	1.47	4.11	5.87	2.99	0.71	3.49	4.89	1.64
36	E6_Aa	NovelBoundary	0	25.78	30.05	10.71	0.00	188.93	36.56	35.93	20.06	92.42	46.06	21.51	43.04	4.65	31.82	58.60	42.76	36.76	9.25	105.20	14.64	37.42	7.44	48.90	75.25	28.07	6.57	69.03	44.17	34.63
37	ER6a	ExonRegion	0	294.26	187.55	193.19	382.47	298.80	177.13	278.33	545.62	91.64	207.41	212.42	247.35	111.10	102.58	148.47	148.45	198.62	107.47	376.33	43.80	100.68	148.71	115.01	90.92	118.93	44.78	200.36	223.25	194.59
38	E6_Da	KnownBoundary	0	244.73	153.47	137.61	245.89	211.04	138.24	242.53	406.29	97.20	168.25	186.55	233.61	101.17	108.59	160.45	95.85	200.63	116.74	412.27	33.91	112.03	114.69	80.87	114.67	91.04	38.24	159.88	237.01	178.24
39	ER6b	ExonRegion	0	96.67	168.71	28.42	197.43	169.64	140.12	155.31	115.42	115.54	83.05	118.01	158.18	62.25	62.84	158.17	92.75	114.51	61.47	324.44	49.86	77.76	36.29	50.95	107.52	41.43	14.12	116.89	83.50	104.51
40	IG43	Intergenic	0	9.45	12.60	4.92	4.86	33.14	11.04	7.75	6.66	14.26	8.82	8.34	14.23	2.63	11.30	17.29	13.95	12.49	7.37	34.32	8.64	11.94	5.91	16.36	22.14	4.04	5.15	17.40	19.35	9.52
41	IG43_AR2	ActiveIntergenicRegion	0	1.56	0.00	0.00	0.00	12.68	4.96	1.83	1.84	4.66	3.28	5.30	5.58	0.63	4.76	22.40	4.83	3.40	3.80	8.50	0.00	3.50	3.00	5.92	2.41	0.43	0.29	7.83	8.84	0.20
42	IG43_SR1	SilentIntergenicRegion	0	5.55	0.00	0.59	0.00	37.51	14.80	2.02	3.57	8.79	11.47	9.59	12.81	1.30	12.06	38.55	14.29	10.96	9.95	25.82	0.00	5.71	5.41	11.17	11.51	2.77	1.57	12.82	10.64	4.26
43	IG43_AR1	ActiveIntergenicRegion	0	10.32	14.24	5.53	5.50	34.81	11.43	8.52	7.22	15.36	9.21	8.58	15.08	2.87	11.87	16.04	14.76	13.37	7.59	36.99	9.76	12.96	6.20	17.53	24.33	4.41	5.73	18.47	20.68	10.56