Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RAB9A	Gene	0	136.28	120.84	73.44	171.43	222.58	153.32	190.48	106.01	118.49	104.66	119.49	128.13	111.71	94.16	806.87	167.48	95.03	64.40	229.65	316.26	97.19	168.87	81.50	166.64	72.18	211.17	85.72	301.88	163.81
2	464506	Transcript	0	115.82	57.55	29.27	136.82	119.77	140.45	184.19	53.32	60.26	102.28	87.43	100.04	94.03	62.14	620.83	161.38	70.34	60.60	130.64	246.03	90.23	155.00	88.70	92.97	50.96	242.93	48.34	356.57	204.57
3	243325	Transcript	0	48.43	3.68	5.08	58.02	74.57	6.56	31.70	16.37	10.08	5.35	29.10	10.00	9.68	13.18	81.32	10.71	9.16	0.00	16.18	62.85	9.91	49.30	6.65	27.75	10.00	16.05	0.00	29.74	13.27
4	ER1a	ExonRegion	1	140.71	39.52	58.42	419.42	319.06	114.19	145.78	60.55	35.84	69.93	59.33	79.22	68.89	38.49	514.08	196.91	39.62	77.43	112.20	179.34	92.02	189.90	104.56	31.40	30.68	288.14	42.04	428.28	148.89
5	E1_Ab	KnownBoundary	1	231.52	87.55	153.97	870.96	774.14	255.53	298.66	109.19	101.74	172.25	126.22	194.36	170.46	93.39	951.15	387.01	137.91	79.37	56.65	369.91	191.85	343.43	200.79	58.68	55.73	580.29	109.04	892.38	412.11
6	ER1b	ExonRegion	0	66.11	22.29	55.96	164.25	185.93	58.61	86.24	39.02	18.49	41.63	43.05	35.64	35.38	29.69	201.35	72.65	32.53	22.48	33.06	114.16	43.80	105.81	45.60	33.26	20.29	108.24	23.07	153.54	76.08
7	E1a_E2a	KnownJunction	0	81.99	9.11	14.77	68.16	54.53	43.05	39.42	42.10	16.93	17.98	24.55	27.44	14.90	36.76	165.24	26.09	16.61	23.12	40.46	92.37	29.84	184.31	11.13	51.56	26.63	15.62	24.00	23.36	24.73
8	E1a_E3a	KnownJunction	0	48.43	3.68	5.08	58.02	74.57	6.56	31.70	16.37	10.08	5.35	29.10	10.00	9.68	13.18	81.32	10.71	9.16	0.00	16.18	62.85	9.91	49.30	6.65	27.75	10.00	16.05	0.00	29.74	13.27
9	I1	Intron	0	1.48	1.60	0.38	0.52	0.99	1.77	0.35	0.31	2.38	2.07	1.30	2.13	0.75	1.45	6.71	1.82	3.38	0.76	2.59	1.30	1.68	0.58	0.45	1.98	0.37	2.14	0.64	7.09	0.95
10	I1_AR1	ActiveIntronRegion	0	2.61	2.54	0.34	0.60	4.89	0.23	0.67	0.31	1.71	1.21	1.37	2.07	0.60	2.49	6.61	1.63	5.10	1.14	1.33	1.34	1.19	0.97	0.00	2.51	0.48	3.93	0.75	8.91	0.78
11	I1_SR1	SilentIntronRegion	0	1.69	0.78	0.43	0.38	0.77	1.96	0.27	0.30	2.78	2.15	1.52	2.77	0.83	1.57	8.44	1.66	3.93	0.63	2.81	1.24	1.69	0.55	0.45	2.48	0.40	2.27	0.63	7.45	1.21
12	I1_AR2	ActiveIntronRegion	0	0.86	2.01	0.00	0.00	0.59	3.59	0.97	0.34	2.51	2.79	1.35	2.07	0.88	1.24	2.03	0.60	2.62	0.23	1.54	2.33	2.24	1.84	0.66	1.29	0.17	1.14	0.00	6.53	1.00
13	I1_SR2	SilentIntronRegion	0	1.23	1.55	0.00	0.69	0.00	2.25	0.19	0.18	1.77	1.63	1.89	1.56	0.87	0.75	2.26	1.84	2.01	0.56	0.61	1.02	3.16	0.00	0.17	1.66	0.41	0.45	0.62	6.08	0.13
14	I1_AR3	ActiveIntronRegion	0	0.82	5.04	0.00	0.00	0.00	1.58	0.00	0.28	2.07	3.23	1.87	1.22	0.40	1.54	6.86	2.17	1.49	0.32	2.45	0.91	1.53	0.00	0.28	0.66	0.00	0.72	1.19	4.90	0.41
15	I1_SR3	SilentIntronRegion	0	0.96	7.69	0.93	0.00	0.00	0.06	0.90	0.00	2.62	4.03	0.06	1.74	0.00	0.41	2.70	0.27	1.29	0.00	8.58	0.00	0.05	0.93	0.00	1.45	0.00	1.63	0.00	4.26	0.44
16	I1_AR4	ActiveIntronRegion	0	0.22	3.02	0.86	0.36	0.00	2.26	0.64	0.29	2.42	3.14	0.73	1.43	1.03	0.81	8.27	2.10	2.57	0.51	4.06	2.91	1.34	1.00	0.57	1.53	0.45	1.17	0.00	8.83	0.70
17	I1_SR4	SilentIntronRegion	0	1.29	1.54	0.44	1.10	1.23	1.40	0.37	0.38	1.88	1.49	0.65	1.29	0.67	1.22	4.85	2.35	2.94	1.31	2.63	1.24	1.50	0.55	0.66	1.43	0.39	2.55	0.71	6.71	0.86
18	E2_Aa	NovelBoundary	0	7.20	16.68	2.94	0.00	0.00	23.06	14.48	1.89	24.64	2.04	4.81	10.48	12.13	4.41	0.00	6.96	4.91	0.00	32.37	7.11	20.98	11.96	4.63	0.00	1.93	20.81	0.00	43.40	12.05
19	ER2a	ExonRegion	0	181.59	75.74	23.13	40.51	68.34	216.46	227.21	100.70	79.49	129.40	122.01	129.19	118.46	84.42	673.39	207.35	88.97	69.21	154.34	395.83	140.20	243.90	94.86	134.51	78.53	263.96	54.08	355.13	222.45
20	E2_Da	NovelBoundary	0	3.01	4.85	1.12	0.00	0.00	0.00	2.92	0.00	0.00	3.56	0.00	2.77	0.00	1.35	9.97	3.82	6.08	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.99	0.00
21	E2a_E3a	KnownJunction	0	131.07	76.69	25.54	82.18	62.93	261.36	434.20	32.30	80.30	254.29	189.52	203.85	217.08	107.68	1227.61	295.59	158.51	103.77	186.13	393.32	146.84	104.09	205.72	164.31	90.09	578.05	84.78	863.81	552.35
22	I2	Intron	0	0.82	1.76	0.32	0.92	0.94	2.66	0.80	0.29	1.80	2.51	0.82	1.54	0.48	1.50	8.26	2.33	3.31	0.82	2.45	1.96	1.64	0.52	0.20	1.58	0.43	1.56	0.76	3.93	1.06
23	I2_SR1	SilentIntronRegion	0	0.85	1.83	0.34	0.98	0.84	2.81	0.87	0.32	1.78	2.63	0.82	1.56	0.51	1.54	8.46	2.31	3.46	0.78	2.52	2.06	1.74	0.50	0.22	1.63	0.47	1.65	0.82	4.11	1.11
24	E3_Aa	NovelBoundary	0	2.83	0.00	1.30	0.00	13.56	3.91	0.00	0.00	0.00	5.67	1.33	4.28	1.62	1.04	16.74	6.96	7.27	4.62	8.09	11.58	1.80	2.04	0.00	17.23	1.93	2.10	0.00	2.29	4.09
25	ER3a	ExonRegion	0	308.88	213.00	173.75	344.08	474.39	320.04	417.51	258.35	202.20	232.57	278.57	270.57	237.82	203.63	1465.92	331.41	196.84	132.67	409.77	618.05	200.11	377.34	181.76	357.70	162.45	471.39	193.39	650.44	333.57
26	E3_Da	KnownBoundary	1	372.02	261.18	163.77	389.11	418.39	325.74	377.33	442.02	443.39	223.14	245.39	329.63	250.74	266.79	2056.58	366.74	309.32	98.25	566.25	805.90	185.27	543.25	170.45	623.64	189.50	776.45	184.73	1206.28	510.09
27	ER3b	ExonRegion	0	43.77	86.70	24.49	73.82	93.97	67.18	74.33	30.96	88.73	39.80	41.76	60.48	50.84	43.36	523.84	80.99	47.97	29.47	160.07	169.28	42.23	52.78	27.23	83.05	28.84	68.85	36.81	112.26	74.43
28	IG13	Intergenic	0	1.79	1.39	1.34	1.25	6.63	2.20	0.77	1.03	2.60	2.36	1.66	2.92	2.32	2.28	12.62	2.37	5.09	0.40	5.56	5.65	3.18	1.13	1.51	5.99	1.49	4.54	1.79	17.65	2.98
29	IG13_SR1	SilentIntergenicRegion	0	0.68	1.76	0.97	2.35	2.30	0.99	0.22	0.00	1.23	1.58	1.79	1.85	2.00	1.87	14.37	2.99	3.91	0.42	6.28	5.64	3.32	0.76	1.39	4.57	1.24	2.24	0.20	8.72	3.40
30	IG13_AR1	ActiveIntergenicRegion	0	2.89	1.31	1.83	0.73	8.72	2.01	0.61	1.66	3.65	2.86	1.97	2.99	3.14	3.69	15.06	2.85	7.28	0.59	5.50	6.30	3.45	1.86	1.84	6.76	2.05	5.51	0.93	23.78	2.63
31	IG13_SR2	SilentIntergenicRegion	0	1.86	1.03	2.25	0.00	11.15	5.89	0.77	2.55	3.42	4.09	1.05	3.16	2.17	1.12	10.48	1.76	6.33	0.00	5.11	4.12	1.92	1.17	2.45	6.66	0.97	8.96	4.04	31.04	4.37
32	IG13_AR2	ActiveIntergenicRegion	0	1.63	1.23	0.32	1.36	6.48	1.56	2.03	0.35	2.34	1.35	1.38	4.45	1.47	1.37	6.89	0.94	2.07	0.37	4.85	5.79	3.52	0.38	0.34	6.49	1.35	3.04	4.26	10.54	1.78