Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C9orf75	Gene	0	14.09	6.42	11.44	5.02	12.85	12.54	4.16	10.82	8.82	11.46	3.66	12.84	12.13	13.91	11.52	9.65	15.90	13.38	6.00	7.77	12.88	24.04	9.73	18.68	9.01	14.42	7.48	21.44	9.98
2	409012	Transcript	0	2.37	0.42	0.11	0.47	0.64	1.05	0.40	0.70	0.62	0.28	0.00	0.35	0.46	1.58	0.83	1.37	0.34	0.73	0.64	0.72	2.12	2.78	0.69	1.45	0.00	1.28	0.00	1.28	1.60
3	321773	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	333046	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	477345	Transcript	0	2.71	0.94	0.94	0.06	0.81	1.84	0.39	1.04	1.73	1.77	0.19	2.35	0.51	1.74	3.30	2.04	8.38	2.14	0.42	0.84	1.12	0.42	0.39	2.64	0.80	1.09	0.17	1.15	0.34
6	ER1a	ExonRegion	0	2.37	0.42	0.11	0.47	0.64	1.05	0.40	0.70	0.62	0.28	0.00	0.35	0.46	1.58	0.83	1.37	0.34	0.73	0.64	0.72	2.12	2.78	0.69	1.45	0.00	1.28	0.00	1.28	1.60
7	E1_Ab	KnownBoundary	0	12.62	0.00	0.00	0.00	0.00	7.17	0.00	9.41	2.95	0.00	0.00	1.20	0.00	5.78	19.93	3.52	2.32	4.50	0.00	0.00	13.04	12.88	2.12	7.96	0.00	6.05	0.00	8.54	2.64
8	ER1b	ExonRegion	0	1.92	0.00	0.17	0.86	0.00	2.82	0.03	1.17	0.53	0.92	0.00	0.15	0.29	1.65	2.57	0.78	1.04	4.52	1.92	1.22	1.53	3.49	1.13	1.15	0.60	2.79	0.38	1.81	1.14
9	E1_Ac	KnownBoundary	0	15.87	0.00	2.52	0.00	0.00	10.97	0.00	0.00	4.42	3.71	0.00	2.95	6.31	8.93	9.97	24.94	7.45	36.99	0.00	3.72	11.31	27.81	9.75	11.48	7.58	14.59	2.29	9.88	7.26
10	ER1c	ExonRegion	0	36.21	12.15	28.84	14.93	32.09	30.45	9.24	25.10	16.26	27.61	9.58	29.51	27.40	36.64	17.44	21.73	30.24	33.35	12.46	18.13	33.12	61.69	25.02	45.75	23.67	31.28	16.64	49.87	22.93
11	E1_Da	NovelBoundary	0	11.86	0.00	1.47	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00	1.13	0.00	3.60	5.02	4.88	0.00	0.00	4.09	0.00	0.00	0.00	1.52	0.00	0.00	6.25	0.00
12	E1a_E2b	KnownJunction	0	67.07	39.26	53.67	9.92	168.59	63.92	40.16	73.95	63.71	55.60	38.66	83.52	75.38	89.91	91.49	42.53	79.53	42.13	40.46	31.34	56.84	104.48	32.36	125.01	60.16	92.69	57.65	160.27	94.65
13	I1_AR1	ActiveIntronRegion	0	6.43	0.00	1.12	0.00	0.00	2.95	0.00	1.84	1.12	4.13	0.00	0.00	1.30	2.85	0.00	0.00	6.01	5.46	0.00	0.00	2.85	0.00	0.00	3.69	0.00	0.00	0.00	3.26	3.07
14	I1_AR2	ActiveIntronRegion	0	2.73	0.53	1.97	0.00	1.60	2.87	0.00	0.42	0.89	2.18	0.00	1.92	1.45	2.98	0.00	2.73	13.01	7.07	2.18	1.35	1.80	0.66	0.30	1.05	0.19	0.26	0.60	1.96	1.09
15	I1_AR3	ActiveIntronRegion	0	0.00	0.00	2.24	0.00	0.00	2.96	0.00	0.00	0.00	0.00	0.00	3.71	0.50	1.47	0.00	0.00	12.41	2.73	9.05	0.00	0.00	1.80	0.00	0.00	3.52	0.00	0.00	0.00	0.00
16	I1_SR2	SilentIntronRegion	0	3.04	0.87	1.71	1.69	0.00	2.04	0.48	0.00	0.41	1.50	0.28	0.97	0.31	3.76	1.09	0.42	15.46	2.73	4.40	0.65	0.67	1.49	0.00	2.27	1.00	2.87	0.52	0.43	0.32
17	I1_AR4	ActiveIntronRegion	0	0.98	0.92	1.41	0.00	1.50	1.72	0.31	0.00	0.85	1.24	0.36	0.72	0.50	1.93	1.55	0.38	10.73	2.04	0.11	0.00	0.00	0.27	0.00	3.14	0.12	2.47	0.23	2.22	0.00
18	E2_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	4.05	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00
19	ER2a	ExonRegion	0	2.71	0.94	0.94	0.06	0.81	1.84	0.39	1.04	1.73	1.77	0.19	2.35	0.51	1.74	3.30	2.04	8.38	2.14	0.42	0.84	1.12	0.42	0.39	2.64	0.80	1.09	0.17	1.15	0.34
20	E2_Ab	KnownBoundary	0	4.90	0.00	2.57	10.57	7.37	7.14	0.00	2.09	1.19	5.63	0.00	2.98	1.66	4.61	0.00	3.21	26.54	13.87	0.00	0.00	2.05	0.00	0.00	6.04	0.00	0.00	0.00	0.00	0.00
21	ER2b	ExonRegion	0	42.91	25.65	48.76	20.78	64.76	44.71	16.62	50.49	38.71	43.89	15.01	52.56	58.55	50.71	43.82	29.80	53.25	48.76	33.96	28.31	47.58	85.71	38.61	70.00	36.47	65.41	37.78	91.86	50.51
22	E2a_E3a	KnownJunction	0	53.79	32.48	32.29	9.92	41.41	54.29	14.70	64.20	33.35	38.63	33.85	51.51	75.76	48.12	23.72	40.01	49.00	46.75	16.18	27.70	41.71	90.62	41.71	77.64	35.31	100.50	37.22	124.46	48.53
23	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
24	ER3a	ExonRegion	0	41.87	37.33	28.51	14.90	26.40	45.44	15.96	46.10	29.35	36.86	16.16	50.52	46.72	37.64	33.55	36.19	51.60	46.73	22.46	21.41	44.50	83.21	33.75	52.21	26.94	60.02	32.21	111.91	33.08
25	E3_Da	KnownBoundary	0	2.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.72	0.00	0.00	0.00	0.00	0.00	1.28	0.00	0.00	3.80	0.00	1.94	0.00	2.75	0.00	0.00	0.00	1.80	0.00
26	E3a_E3b	KnownJunction	0	45.65	51.19	28.15	21.57	42.89	41.67	16.25	47.68	28.56	37.39	2.88	45.90	43.47	41.26	37.87	25.17	47.76	51.50	8.09	37.71	45.93	113.52	45.56	54.67	30.69	44.89	26.04	92.92	26.87
27	ER3b	ExonRegion	0	3.83	0.50	0.29	0.17	0.41	1.29	0.36	0.58	1.27	0.39	0.41	1.15	0.44	0.90	6.92	0.42	3.45	1.80	0.16	1.52	1.33	3.01	0.57	2.13	0.39	1.57	0.30	1.73	0.41
28	E3_Ab	KnownBoundary	0	8.14	0.00	0.00	0.00	0.00	1.50	0.00	0.00	1.55	0.00	0.00	1.87	0.00	0.89	0.00	0.00	4.39	0.00	0.00	0.00	0.00	2.04	0.00	3.05	0.00	0.00	0.00	0.00	0.00
29	ER3c	ExonRegion	0	29.23	18.98	29.44	8.50	31.01	28.64	11.93	24.36	27.23	28.21	8.16	30.07	33.02	29.95	40.18	24.88	32.24	27.29	13.89	21.81	28.43	63.07	23.62	46.34	20.70	37.66	20.41	52.02	24.45
30	ER3d	ExonRegion	0	2.14	0.00	2.81	0.00	4.98	0.69	0.00	0.92	1.69	0.72	0.00	1.86	0.65	1.36	0.00	1.27	0.50	1.36	0.00	0.00	0.71	1.80	1.81	1.08	0.00	1.57	0.92	0.82	0.00