Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF251	Gene	0	48.77	37.27	22.41	17.15	37.45	45.46	23.77	10.59	16.74	35.91	17.77	19.21	10.95	114.45	84.89	147.18	104.60	63.97	65.96	101.61	40.20	32.05	27.24	65.77	60.07	43.92	79.18	96.24	91.87
2	292562	Transcript	1	59.78	29.04	24.31	38.81	33.73	31.94	33.59	25.31	15.75	30.91	11.88	15.50	8.77	65.95	53.73	90.70	62.31	76.55	39.95	75.35	21.50	27.81	21.57	37.32	35.34	29.77	29.67	58.60	40.62
3	IG38_AR8	ActiveIntergenicRegion	0	1.40	6.84	1.37	10.55	2.39	6.74	3.29	0.60	3.12	7.79	1.36	1.21	0.85	1.55	3.02	4.35	4.15	4.72	9.40	7.73	4.87	0.29	1.18	5.62	2.57	1.28	3.59	6.12	2.83
4	IG38_SR6	SilentIntergenicRegion	0	2.53	2.28	1.18	3.39	0.00	0.00	2.38	0.43	1.12	2.39	0.70	0.73	0.69	3.31	3.03	4.98	6.70	3.90	2.64	2.28	1.35	1.06	0.85	5.33	2.19	0.56	1.30	4.23	1.90
5	IG38_SR4	SilentIntergenicRegion	0	2.24	0.00	1.50	0.26	0.00	1.02	4.77	5.52	1.58	3.82	2.13	2.75	2.72	4.31	7.03	2.49	15.22	6.32	2.54	4.02	0.44	0.00	0.00	0.62	1.29	2.33	0.00	3.20	1.20
6	IG38_AR5	ActiveIntergenicRegion	0	3.00	1.53	2.48	11.32	0.80	4.26	6.09	5.69	2.94	6.32	2.54	2.07	2.77	6.33	12.27	12.78	23.12	9.43	2.63	3.11	2.10	0.30	0.00	6.09	2.28	1.13	2.52	6.08	5.04
7	IG38_AR4	ActiveIntergenicRegion	0	0.49	0.00	0.58	0.00	0.00	2.18	0.00	0.28	0.78	1.11	0.00	0.76	1.00	0.90	0.85	2.03	2.06	2.46	0.98	0.85	0.15	0.00	0.00	0.70	0.88	0.24	1.41	4.02	0.62
8	IG38_SR1	SilentIntergenicRegion	0	0.34	1.73	0.13	0.21	0.00	1.39	0.32	0.74	1.18	1.45	0.10	0.00	0.10	2.82	1.44	5.87	6.65	1.42	3.32	1.59	1.03	0.00	0.00	1.72	1.60	0.38	0.15	3.48	0.58
9	ER1a	ExonRegion	0	22.24	2.89	8.47	17.70	20.37	5.90	10.80	3.27	5.88	8.04	2.38	4.72	3.08	6.51	11.48	21.06	6.47	20.43	2.75	16.13	3.85	11.15	5.77	3.45	2.65	9.46	1.18	17.12	10.80
10	E1_Da	NovelBoundary	0	16.75	0.00	0.00	9.06	14.30	5.06	5.21	2.39	0.00	1.96	0.00	1.30	0.00	2.95	7.77	14.23	11.01	9.25	0.00	23.65	1.97	0.00	2.41	2.93	1.78	0.00	0.00	2.07	1.42
11	E1a_E2a	KnownJunction	0	21.00	3.88	17.24	48.10	27.56	5.06	5.66	21.25	4.93	7.39	0.00	7.05	7.48	9.00	25.11	40.77	18.26	23.76	0.00	15.63	3.53	29.66	12.90	11.72	3.37	10.69	0.00	35.68	18.42
12	I1	Intron	0	45.32	10.25	9.46	18.61	10.41	24.22	24.11	17.93	7.49	16.74	3.86	8.17	3.90	33.20	35.00	52.42	56.90	42.93	18.96	38.80	8.07	6.52	5.37	15.36	9.41	7.72	5.60	29.62	9.19
13	I1_AR1	ActiveIntronRegion	0	45.48	10.29	9.49	18.68	10.44	24.31	24.20	17.99	7.52	16.80	3.88	8.20	3.92	33.32	35.13	52.60	57.10	43.08	19.03	38.94	8.10	6.55	5.39	15.42	9.44	7.75	5.62	29.73	9.22
14	E2_Aa	NovelBoundary	0	51.97	12.80	16.79	18.98	21.07	17.15	18.94	34.19	8.98	17.30	6.11	17.80	2.90	51.80	73.75	78.79	94.63	93.88	24.05	46.89	11.07	18.28	12.31	22.55	23.94	13.99	2.48	35.23	21.52
15	ER2a	ExonRegion	1	84.39	19.98	23.38	56.74	30.30	26.58	33.93	33.89	12.91	31.62	6.64	9.91	9.39	58.30	54.09	74.47	67.18	90.01	32.69	66.00	17.55	19.80	17.78	34.70	25.49	19.69	21.28	53.43	25.81
16	E2_Da	NovelBoundary	0	66.30	9.31	11.78	29.12	20.78	22.91	33.30	8.91	15.62	15.90	8.64	14.49	5.86	27.05	16.74	32.05	96.20	65.50	0.00	28.94	10.83	4.96	2.51	16.69	13.37	9.44	1.89	33.79	16.37
17	E2a_E3a	KnownJunction	0	47.37	18.71	19.26	20.28	33.01	40.21	41.77	26.38	19.09	35.35	9.65	20.48	12.04	50.89	17.14	48.50	35.09	57.67	24.28	59.05	13.36	18.47	13.54	11.60	27.09	24.85	4.17	47.94	15.22
18	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	1.17	0.00	1.06	0.00	7.34	1.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	0	35.08	9.85	8.44	22.49	4.00	9.19	14.02	15.57	8.72	8.27	2.76	3.61	1.41	19.57	21.05	23.11	49.87	32.79	11.33	15.74	8.17	4.42	1.48	7.92	6.24	4.29	1.75	12.23	12.23
20	I2_AR1	ActiveIntronRegion	0	38.78	11.54	9.22	22.69	4.60	10.41	16.47	16.59	9.49	8.35	2.89	3.70	1.22	21.63	20.42	24.30	55.80	35.19	11.42	17.25	9.23	4.66	1.36	8.56	8.12	4.34	2.41	14.79	13.54
21	I2_SR1	SilentIntronRegion	0	25.83	5.53	6.51	22.37	2.47	6.07	7.72	13.12	6.82	8.22	2.46	3.44	1.95	14.42	23.18	20.37	34.96	27.02	11.29	11.99	5.48	3.87	1.83	6.37	1.30	4.19	0.00	5.57	8.97
22	E3_Aa	NovelBoundary	0	48.31	4.17	19.93	20.06	19.75	16.19	20.83	22.59	10.26	11.38	1.20	1.45	1.46	20.18	51.42	60.36	69.89	29.28	16.18	7.77	11.19	4.57	0.00	11.25	10.49	7.81	6.61	16.44	19.21
23	ER3a	ExonRegion	0	73.55	39.49	30.18	70.65	41.84	37.87	53.31	43.18	20.40	42.90	13.37	22.50	12.74	76.41	74.23	113.38	79.83	102.62	63.08	76.86	22.90	22.41	23.73	31.90	31.82	42.93	13.61	72.16	51.61
24	E3_Da	NovelBoundary	0	5.54	0.00	1.25	0.00	6.19	0.00	0.00	0.00	0.00	0.00	2.97	0.00	0.00	2.17	0.00	0.00	5.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	2.05
25	E3a_E4a	KnownJunction	0	103.64	52.06	33.56	66.43	22.11	54.90	73.75	40.01	36.30	38.31	17.37	20.63	12.32	97.11	76.14	86.98	95.69	159.90	88.79	118.59	28.40	40.94	31.37	59.76	59.56	43.00	8.60	101.05	40.94
26	I3	Intron	0	3.60	0.00	1.29	1.85	1.26	2.84	1.04	2.38	0.15	2.05	1.54	0.56	1.17	1.17	2.61	2.79	5.97	1.99	4.12	0.61	2.76	0.23	0.23	2.50	0.18	1.42	2.36	2.53	0.95
27	I3_SR1	SilentIntronRegion	0	3.61	0.00	1.30	1.86	1.27	2.85	1.05	2.39	0.15	2.06	1.54	0.56	1.17	1.17	2.62	2.81	6.01	2.00	4.15	0.62	2.78	0.23	0.23	2.51	0.19	1.43	2.38	2.54	0.95
28	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	6.34	0.00	0.00	0.00	0.00	1.84	6.49	1.66	0.00	4.14	0.00	0.00	2.43	9.25	0.00	3.64	0.00	0.00	0.00	0.00	0.00	4.29	2.39	0.00	1.68
29	ER4a	ExonRegion	0	99.62	38.09	38.18	47.47	38.80	41.63	38.79	46.54	20.76	50.43	22.79	16.19	8.98	93.56	72.66	122.16	92.89	111.08	50.82	110.82	30.23	32.31	27.23	59.10	50.69	31.92	52.25	71.91	57.22
30	E4_Da	NovelBoundary	0	56.98	28.50	12.33	51.55	0.00	20.49	15.96	43.55	23.05	9.79	5.73	3.28	11.53	23.62	23.92	19.97	35.07	50.86	0.00	27.13	18.05	8.41	1.92	11.48	12.09	10.17	2.29	19.68	6.83
31	E4a_E5a	KnownJunction	0	40.70	45.86	26.31	10.78	50.84	25.59	22.26	6.57	4.17	27.04	15.31	17.41	1.27	74.00	60.00	146.50	50.17	61.65	24.28	104.78	28.48	40.98	32.36	49.89	49.71	37.29	73.80	21.79	41.20
32	I4_AR1	ActiveIntronRegion	0	35.67	16.35	11.90	42.62	15.60	17.02	13.39	16.48	18.42	18.58	8.74	7.60	5.84	14.40	12.34	9.54	47.26	31.55	19.32	20.69	14.36	5.23	4.60	13.13	11.27	6.33	2.49	14.33	7.96
33	I4_SR1	SilentIntronRegion	0	6.45	12.52	4.36	8.22	9.59	11.75	3.27	4.26	18.63	13.38	2.20	5.61	5.85	6.98	14.03	4.23	26.41	11.07	7.33	10.88	10.87	1.86	3.97	5.34	7.54	4.79	1.83	4.88	9.61
34	I4_SR3	SilentIntronRegion	0	4.01	4.07	0.97	0.00	3.05	1.77	1.82	2.52	2.98	3.15	1.38	1.15	0.58	2.11	6.85	3.09	12.17	2.86	2.81	3.05	2.35	0.96	0.24	4.02	2.45	3.23	0.57	3.12	2.96
35	I4_AR4	ActiveIntronRegion	0	4.31	1.18	1.98	0.00	4.01	1.64	1.05	2.73	3.31	2.50	0.98	0.79	0.89	1.96	6.62	2.05	15.11	2.78	3.28	3.09	1.83	0.66	0.50	4.12	3.19	2.84	0.17	3.43	5.97
36	I4_AR5	ActiveIntronRegion	0	0.22	0.00	0.00	0.00	0.00	0.28	0.00	0.00	1.90	0.00	0.00	1.24	0.34	0.34	0.00	0.00	2.42	1.69	0.00	0.00	4.50	0.00	0.00	0.11	0.00	0.00	0.00	0.00	0.49
37	E5_Aa	NovelBoundary	0	0.00	4.56	0.00	0.00	0.00	1.92	0.00	0.00	0.00	1.76	0.00	0.00	0.00	3.08	9.97	2.75	1.08	0.00	8.09	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	1.62
38	ER5a	ExonRegion	0	45.51	40.38	22.26	11.17	38.72	49.75	22.03	6.74	17.33	37.10	19.38	20.65	11.59	127.77	92.73	162.52	115.26	61.82	72.89	110.29	45.21	34.62	29.41	73.77	67.70	48.10	92.10	106.29	104.40
39	IG37_AR5	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34
40	IG37_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34