Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NDUFB9	Gene	0	3241.20	957.45	623.33	2480.97	5438.89	988.50	3316.78	3735.80	1237.07	905.69	507.38	687.85	1431.62	632.76	2138.17	818.30	622.43	802.58	1743.21	2508.49	634.05	2305.08	1151.24	715.42	939.76	949.04	796.97	1687.25	1962.79
2	276689	Transcript	0	3387.43	985.27	629.78	2309.44	5288.80	897.64	3135.24	3976.08	1088.30	867.49	504.11	604.56	1268.51	675.35	2175.47	714.32	612.14	750.84	1774.65	2544.28	538.17	2502.11	1051.37	768.69	910.49	800.82	756.28	1425.24	1551.46
3	ER1a	ExonRegion	0	2282.20	425.66	753.54	3726.58	7471.36	765.13	3043.83	2748.50	720.06	735.66	382.79	770.85	1500.05	385.23	1459.68	779.46	634.47	613.29	1006.68	1415.29	503.13	1913.61	1072.07	345.88	562.43	1353.69	993.60	2593.09	2665.08
4	E1_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	5.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	E1a_E2a	KnownJunction	0	2575.60	249.74	188.01	1223.41	3431.69	467.16	815.43	3216.97	442.54	282.57	172.85	159.00	433.50	309.64	694.03	202.49	149.71	281.78	372.25	1434.25	255.62	3090.41	215.42	446.70	443.45	311.81	209.82	302.79	473.18
6	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	I1_AR2	ActiveIntronRegion	0	1.50	4.18	0.32	0.00	1.71	2.92	0.00	0.00	0.11	1.51	0.00	0.64	0.91	0.00	1.61	2.60	2.61	3.05	0.00	2.33	0.30	0.00	0.00	1.84	1.00	0.00	3.84	0.00	0.00
8	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00	0.00	1.16	3.67	0.00	1.45	1.21	0.86	0.00	0.00	2.18	14.64	0.00	3.97	0.00	0.00	0.00	6.10	0.00	0.00	0.00	1.89	0.00
9	ER2a	ExonRegion	0	4194.24	1260.79	442.24	1130.43	3394.96	1322.09	4282.20	5522.92	1182.74	1167.22	651.78	1068.85	2147.05	865.21	2663.42	1217.65	923.90	1131.49	2436.16	3225.25	807.61	2929.76	1551.37	895.41	1199.89	1182.36	922.00	1955.18	3007.07
10	E2_Da	NovelBoundary	0	8.26	4.65	0.00	0.00	0.00	3.38	0.00	0.00	1.16	0.00	0.00	0.00	0.00	4.14	0.00	3.82	6.80	0.00	0.00	4.13	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	1.58
11	E2a_E3a	KnownJunction	0	4689.52	1519.89	997.84	1794.56	5389.67	1033.16	4246.82	5570.35	872.98	1127.98	683.94	751.91	1395.77	972.65	2656.73	697.90	798.56	829.15	2362.33	3290.68	493.48	3061.82	1551.27	1147.80	1217.90	869.57	1204.67	1847.81	1329.68
12	E2a_E4a	NovelJunction	0	8.61	0.00	0.00	18.12	20.78	0.00	5.61	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.87	0.00	0.00	2.48	1.87	0.00	1.44	0.00	1.84	0.00	3.50
13	I2	Intron	0	4.61	4.56	0.13	2.20	0.75	2.01	1.24	1.27	2.02	3.33	0.64	0.43	0.00	1.11	1.20	2.42	1.72	2.84	2.21	2.42	2.08	0.00	0.42	0.66	0.44	0.24	0.84	1.38	1.13
14	I2_SR1	SilentIntronRegion	0	4.64	4.60	0.13	2.22	0.75	2.02	1.25	1.26	2.04	3.35	0.64	0.43	0.00	1.12	1.21	2.44	1.73	2.86	2.23	2.44	2.10	0.00	0.42	0.67	0.44	0.24	0.85	1.39	1.14
15	E3_Aa	NovelBoundary	0	2.83	0.00	0.00	0.00	0.00	3.72	0.00	0.00	0.00	0.00	3.04	1.23	0.00	0.00	0.00	0.00	8.42	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER3a	ExonRegion	0	4661.61	1508.18	1257.40	2898.95	6398.67	1170.85	3652.84	5164.42	2266.14	1081.83	617.58	568.04	1306.83	905.46	2960.02	824.02	630.38	964.38	2331.00	3965.32	754.66	3104.67	1136.57	1225.93	1439.24	710.76	832.29	1186.77	1287.94
17	E3_Da	NovelBoundary	0	0.00	8.53	1.27	10.78	0.00	1.69	0.00	2.54	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	4.48	0.00	0.00	0.00	0.00	4.38	2.51	0.00	1.93	1.67	0.00	0.00	1.49
18	E3a_E4a	KnownJunction	0	2812.07	1074.79	419.64	2994.24	5909.59	730.44	3361.54	3314.21	944.00	944.47	589.16	560.14	1271.74	789.40	2962.29	773.78	798.09	840.83	2454.27	2419.94	420.40	1726.79	952.00	711.27	735.05	642.42	622.31	1128.90	1268.87
19	I3	Intron	0	3.61	2.17	0.63	0.60	1.24	2.49	0.34	0.85	1.16	2.56	0.40	0.83	0.05	0.93	0.58	1.57	2.01	1.83	0.67	0.58	1.50	0.38	0.38	1.09	0.66	0.86	0.00	1.72	0.56
20	I3_SR1	SilentIntronRegion	0	3.62	2.04	0.56	0.90	1.53	2.47	0.25	1.04	1.05	2.57	0.41	0.67	0.08	1.00	0.87	2.02	2.08	1.51	0.40	0.69	1.48	0.56	0.57	0.67	0.36	0.89	0.00	2.06	0.71
21	I3_AR1	ActiveIntronRegion	0	3.62	2.47	0.80	0.00	0.63	2.56	0.52	0.48	1.38	2.55	0.39	1.16	0.00	0.81	0.00	0.64	1.89	2.50	1.24	0.36	1.55	0.00	0.00	1.95	1.30	0.82	0.00	1.02	0.27
22	E4_Aa	NovelBoundary	0	0.00	8.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	1.04	5.39	0.00	0.00	0.00	0.00	0.00	2.63	0.00	0.00	0.00	3.77	5.08
23	ER4a	ExonRegion	0	2496.80	857.81	349.76	2397.93	5025.65	794.63	2544.04	2295.18	1189.68	732.67	430.68	353.12	824.60	499.83	1832.10	504.96	349.84	594.96	1459.87	2059.25	532.29	1687.73	880.90	607.84	775.47	535.12	509.30	962.16	828.39
24	IG33	Intergenic	0	5.30	3.45	0.64	2.73	9.61	4.97	7.16	2.22	4.65	5.95	3.70	1.49	0.86	2.67	3.51	6.28	4.55	2.32	8.11	6.15	2.35	2.29	2.18	3.68	2.90	0.50	3.14	2.80	1.27
25	IG33_AR1	ActiveIntergenicRegion	0	6.89	4.81	0.87	4.63	9.57	5.14	11.28	2.32	4.70	6.36	4.99	1.33	1.32	2.91	4.47	6.46	5.19	2.69	10.28	8.52	2.27	2.38	2.80	3.10	4.00	0.85	3.95	2.99	1.44
26	IG33_AR2	ActiveIntergenicRegion	0	6.93	0.00	3.10	0.00	4.98	7.52	0.00	1.41	6.01	9.09	1.40	2.47	0.00	3.41	0.00	8.19	5.60	0.00	9.05	11.24	0.67	3.82	1.81	4.30	1.43	0.00	1.83	5.18	3.87
27	IG33_AR3	ActiveIntergenicRegion	0	4.72	0.00	2.02	0.00	4.98	5.77	0.00	2.12	6.07	3.47	2.98	2.47	0.00	5.03	2.52	3.80	4.31	2.05	1.58	11.24	0.93	7.12	1.18	8.17	1.43	0.00	1.83	2.77	4.03
28	IG33_AR4	ActiveIntergenicRegion	0	6.16	0.00	0.00	0.00	4.45	1.87	3.22	3.56	9.68	2.58	1.98	1.71	0.39	2.88	3.81	2.26	2.66	3.48	8.28	4.43	2.91	6.33	1.81	10.21	0.73	0.00	0.31	0.87	2.83
29	IG33_SR1	SilentIntergenicRegion	0	6.56	0.00	0.00	0.00	19.34	4.77	4.51	3.68	8.00	6.28	0.63	1.24	1.30	3.31	0.00	7.44	3.48	6.90	6.39	2.81	2.77	0.42	2.23	7.85	2.02	0.00	0.00	3.26	1.34
30	IG33_AR5	ActiveIntergenicRegion	0	6.43	0.00	0.00	0.00	24.91	8.25	4.03	5.52	7.58	8.30	2.38	1.39	1.30	2.49	7.00	7.91	4.01	4.09	4.53	2.81	3.03	0.00	1.81	5.65	4.11	0.00	0.00	3.26	1.34
31	IG33_AR6	ActiveIntergenicRegion	0	6.43	0.00	0.00	0.00	21.17	12.14	3.36	5.52	4.77	8.66	2.38	2.06	1.08	1.81	11.20	9.07	4.93	5.00	4.53	2.58	5.11	1.50	1.81	5.20	5.12	0.00	0.00	3.26	1.12
32	IG33_AR7	ActiveIntergenicRegion	0	6.43	0.00	0.00	0.00	9.96	10.60	0.00	3.95	4.01	8.66	2.38	2.47	0.00	0.91	11.20	11.57	5.01	2.73	4.53	0.00	4.28	1.80	1.81	4.30	4.29	0.00	0.00	0.47	0.00
33	IG33_AR8	ActiveIntergenicRegion	0	6.43	0.00	0.00	0.00	9.96	10.77	0.00	1.84	5.24	6.74	2.38	2.47	0.00	1.97	11.20	10.12	4.34	2.73	4.53	2.81	4.28	1.80	0.90	4.30	4.29	0.00	0.00	1.63	0.00
34	IG33_AR9	ActiveIntergenicRegion	0	0.00	0.90	0.00	0.00	8.60	9.12	0.00	4.52	6.54	7.48	0.65	2.47	0.00	1.81	1.53	5.06	4.55	0.74	4.53	2.81	2.85	2.79	0.00	4.89	2.47	0.00	0.00	1.63	0.00
35	IG33_SR2	SilentIntergenicRegion	0	0.49	3.22	0.00	0.00	11.09	3.62	0.69	0.95	2.46	5.57	1.86	1.56	0.00	1.96	0.00	6.56	3.63	0.66	4.01	0.47	2.34	0.64	1.18	2.41	0.48	0.00	3.74	2.91	0.00
36	IG33_AR10	ActiveIntergenicRegion	0	1.92	0.00	0.00	0.00	0.00	0.58	0.00	0.00	0.00	1.52	1.19	0.52	0.00	0.62	0.00	3.20	0.90	0.00	4.53	0.00	1.35	0.00	0.38	0.00	0.75	0.00	0.00	1.20	0.00