Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TP53INP1	Gene	0	67.79	132.41	94.90	48.87	154.73	141.84	113.52	5.02	92.03	168.15	70.78	24.53	26.44	212.04	608.66	256.15	201.22	614.56	126.23	787.73	64.48	27.36	310.05	152.25	169.63	88.83	446.33	232.59	236.21
2	448464	Transcript	0	60.04	29.44	125.24	8.19	103.61	75.49	66.41	7.89	15.60	129.54	73.96	14.88	7.76	161.31	137.30	191.01	134.30	372.49	24.85	451.19	25.57	26.29	262.06	44.69	105.40	88.41	162.18	132.11	70.54
3	342697	Transcript	0	55.74	18.03	70.51	26.75	32.86	42.17	32.61	2.09	9.68	46.98	25.97	4.61	5.67	107.24	42.26	72.52	86.03	337.90	48.55	285.81	20.46	9.38	168.24	13.94	47.09	51.15	106.45	117.99	92.70
4	378776	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	8.06	0.13	3.90	7.31	17.34	4.62	4.11	0.00	2.07	5.26	1.76	0.59	0.00	2.79	4.93	17.31	4.33	13.76	0.18	6.18	3.25	10.31	10.78	0.43	0.80	4.59	3.59	6.52	2.90
6	ER1b	ExonRegion	0	31.29	9.48	26.08	7.87	47.48	18.73	18.97	0.70	2.97	30.50	6.08	1.36	1.89	32.23	41.46	74.94	40.83	170.71	13.47	119.65	9.46	21.23	112.10	6.15	13.82	24.35	28.23	64.06	39.96
7	E1a_E2a	KnownJunction	0	52.26	19.00	24.89	0.00	33.60	62.65	38.39	2.49	11.27	50.61	9.33	4.43	7.71	79.50	85.51	138.62	53.77	340.60	40.46	366.11	24.63	24.60	144.01	5.98	49.86	37.03	26.19	31.90	50.74
8	Ix	Intron	0	1.17	0.63	0.37	0.31	0.11	1.29	1.85	0.12	1.48	1.99	0.21	0.51	0.27	1.65	12.40	0.54	4.76	4.51	1.60	4.66	0.84	0.16	0.79	1.41	1.00	0.58	1.24	4.56	1.84
9	Ix_SR1	SilentIntronRegion	0	1.17	0.63	0.37	0.31	0.11	1.29	1.85	0.12	1.48	1.99	0.21	0.51	0.27	1.65	12.41	0.54	4.76	4.52	1.60	4.67	0.84	0.16	0.79	1.41	1.00	0.58	1.24	4.56	1.84
10	Ix	Intron	0	1.08	1.20	0.49	0.75	1.74	1.30	0.38	0.35	0.84	1.21	0.15	0.36	0.08	1.31	5.37	0.51	3.94	3.28	1.20	4.84	1.37	0.45	0.64	1.08	0.81	0.63	1.34	5.22	0.97
11	Ix_SR1	SilentIntronRegion	0	1.09	1.21	0.50	0.76	1.77	1.32	0.39	0.35	0.86	1.23	0.15	0.37	0.08	1.33	5.45	0.51	4.00	3.26	1.22	4.92	1.39	0.46	0.65	1.10	0.82	0.63	1.36	5.30	0.98
12	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	1.50	0.95	9.97	3.82	6.10	4.62	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	10.69	0.00
13	ER2a	ExonRegion	0	90.21	83.16	98.40	25.59	97.18	115.30	98.09	5.59	18.42	171.32	50.15	13.37	11.73	247.19	126.42	212.01	169.34	549.01	62.71	661.24	45.32	27.77	422.05	54.61	155.31	70.23	178.10	233.02	135.85
14	E2_Da	NovelBoundary	0	0.00	9.40	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	1.54	0.00	2.08	0.00	3.82	5.65	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	0.00	8.60	0.00	0.00
15	E2a_E3a	KnownJunction	0	148.23	161.91	128.44	68.81	108.47	241.98	119.69	4.78	29.75	220.66	82.53	23.89	12.83	330.31	178.39	303.09	225.30	734.88	88.79	890.42	48.13	26.69	450.93	72.02	237.81	98.79	414.38	256.15	133.84
16	Ix	Intron	0	5.05	2.73	0.29	0.00	0.43	2.28	0.53	0.00	0.78	3.53	0.73	0.00	0.23	2.21	2.01	2.54	4.17	12.20	3.63	14.59	2.12	0.79	0.63	2.07	1.12	0.27	5.12	6.12	0.99
17	Ix_AR1	ActiveIntronRegion	0	8.03	2.31	0.00	0.00	1.29	2.58	0.00	0.00	1.25	5.14	0.63	0.00	0.34	2.46	1.22	3.57	4.84	16.22	3.38	17.11	2.07	0.95	0.96	2.27	1.45	0.70	2.56	5.70	1.18
18	Ix_SR1	SilentIntronRegion	0	3.60	2.96	0.44	0.00	0.00	2.15	0.79	0.00	0.56	2.75	0.78	0.00	0.17	2.10	2.42	2.04	3.86	10.26	3.77	13.42	2.15	0.71	0.47	1.97	0.97	0.06	6.41	6.36	0.90
19	E3_Aa	NovelBoundary	0	0.00	8.34	1.47	0.00	0.00	0.00	0.00	0.00	7.49	1.76	0.00	0.00	0.00	1.82	6.98	2.91	4.84	19.26	0.00	20.51	0.00	0.00	0.00	2.45	1.59	0.00	0.00	8.90	5.45
20	ER3a	ExonRegion	0	150.16	104.44	206.88	34.76	135.62	170.08	127.31	9.14	29.27	257.98	101.56	29.77	18.37	366.63	223.06	287.13	289.73	794.18	108.32	827.04	54.87	53.71	568.57	87.42	248.26	175.24	338.33	424.20	248.85
21	E3_Da	NovelBoundary	0	2.77	0.00	1.54	0.00	0.00	5.56	0.00	0.00	0.00	12.58	1.27	0.00	0.00	4.36	0.00	6.58	5.38	23.89	0.00	20.10	0.00	0.00	4.48	0.00	1.67	0.00	0.00	1.93	1.98
22	E3a_E4a	KnownJunction	0	54.15	60.21	107.21	0.00	56.89	102.79	50.58	7.02	7.83	144.56	47.77	9.13	8.02	141.58	122.58	178.93	106.24	373.22	24.28	450.96	15.28	23.87	229.75	32.18	104.87	94.58	95.07	119.02	85.64
23	E3a_E5a	KnownJunction	1	55.74	18.03	70.51	26.75	32.86	42.17	32.61	2.09	9.68	46.98	25.97	4.61	5.67	107.24	42.26	72.52	86.03	337.90	48.55	285.81	20.46	9.38	168.24	13.94	47.09	51.15	106.45	117.99	92.70
24	Ix	Intron	0	2.13	3.76	0.46	1.07	2.30	3.17	1.65	0.09	1.43	3.12	0.50	0.34	0.11	3.41	5.08	5.97	4.93	21.28	3.49	16.95	3.44	0.22	0.99	1.39	1.31	0.90	1.73	4.25	1.69
25	Ix_AR2	ActiveIntronRegion	0	1.35	2.03	1.05	0.00	3.08	3.03	2.54	0.00	2.12	4.09	0.00	0.00	0.61	2.85	4.63	10.94	4.70	28.29	3.02	26.16	2.69	0.57	0.57	2.71	0.90	1.48	0.00	9.24	1.47
26	Ix_SR1	SilentIntronRegion	0	2.20	3.91	0.41	1.16	2.24	3.19	1.58	0.10	1.38	3.04	0.55	0.37	0.07	3.46	5.12	5.55	4.95	20.70	3.53	16.18	3.50	0.19	1.02	1.28	1.35	0.85	1.88	3.83	1.71
27	E4_Aa	NovelBoundary	0	3.01	0.00	1.00	0.00	7.22	1.96	0.00	0.00	6.36	7.99	0.00	0.00	0.00	6.85	8.17	15.15	11.43	52.27	16.18	34.82	1.85	0.00	0.00	0.00	3.11	6.05	8.75	1.80	1.72
28	ER4a	ExonRegion	0	53.05	47.63	132.50	7.31	61.85	84.77	51.07	11.05	11.42	136.20	54.55	12.27	7.69	149.89	119.01	175.67	134.82	354.11	28.66	469.38	24.13	29.90	260.24	37.29	104.94	89.19	116.91	129.32	93.62
29	E4_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	14.66	0.00	0.00	2.74	4.07	0.00	0.00	0.00	8.04	24.52	7.65	10.38	27.74	16.18	28.86	0.00	0.00	4.43	0.00	0.00	0.00	0.00	12.45	2.05
30	E4b_E5a	KnownJunction	0	65.83	27.05	108.93	9.06	111.41	68.60	71.80	6.07	15.59	124.19	79.72	15.63	7.67	155.87	144.71	198.06	123.89	391.46	24.28	449.22	26.67	24.70	252.26	45.28	103.65	87.42	171.85	133.00	59.36
31	ER4b	ExonRegion	0	54.25	31.84	141.55	7.31	95.80	82.37	61.02	9.70	15.60	134.88	68.20	14.13	7.84	166.76	129.89	183.96	144.71	353.53	25.41	453.17	24.47	27.87	271.86	44.10	107.14	89.40	152.51	131.22	81.72
32	Ix	Intron	0	2.07	3.85	0.86	0.82	3.34	4.54	2.41	0.21	2.75	4.60	1.35	0.67	0.11	4.07	9.14	6.66	4.33	25.77	4.00	26.06	5.03	1.13	1.75	1.47	1.63	1.16	1.46	4.73	0.68
33	Ix_SR2	SilentIntronRegion	0	3.95	0.00	0.00	0.00	0.00	2.53	1.24	0.00	0.69	3.55	0.00	0.00	0.00	2.50	2.83	4.57	1.83	20.32	0.00	4.61	1.75	1.11	2.22	0.00	0.88	0.97	3.38	6.01	0.00
34	Ix_AR3	ActiveIntronRegion	0	2.64	6.01	0.00	0.00	6.08	0.85	0.00	0.00	2.10	1.80	0.00	0.00	0.00	0.00	0.00	6.14	1.86	16.97	1.99	25.19	0.89	0.00	3.37	0.00	1.78	0.00	0.00	4.06	0.00
35	Ix_AR2	ActiveIntronRegion	0	1.78	5.04	0.76	1.32	2.70	5.23	2.06	0.34	3.50	3.68	1.17	0.66	0.00	4.15	8.53	6.44	4.55	25.18	4.98	31.22	6.54	0.67	0.87	1.47	1.65	1.40	1.45	2.63	0.79
36	Ix_AR1	ActiveIntronRegion	0	3.31	0.00	2.36	0.00	0.45	6.17	5.56	0.00	1.28	10.30	4.63	2.19	0.37	8.20	12.47	3.11	8.21	32.09	4.73	20.65	3.67	2.57	4.60	3.85	1.45	0.69	3.00	13.66	1.04
37	Ix_SR1	SilentIntronRegion	0	1.04	1.56	1.70	0.00	9.20	4.40	4.90	0.00	1.92	8.95	2.41	0.60	0.71	5.26	22.40	11.86	4.55	36.03	3.23	20.80	4.01	3.50	2.70	2.15	1.93	1.12	0.00	9.53	0.97
38	E5_Aa	NovelBoundary	0	5.13	0.00	0.00	0.00	0.00	1.84	0.00	0.00	1.55	2.00	2.88	0.00	0.00	4.28	0.00	10.10	3.42	23.12	8.09	18.77	1.76	1.85	0.00	0.00	3.71	4.38	12.72	12.49	1.29
39	ER5a	ExonRegion	0	109.02	85.65	193.11	56.20	128.98	144.94	115.37	7.42	29.99	186.52	95.16	22.53	15.43	285.60	206.49	264.77	237.56	732.63	121.96	746.21	60.98	41.85	469.19	64.46	169.92	179.08	309.09	339.01	210.87
40	E5_Ab	KnownBoundary	0	73.55	88.90	205.97	42.92	109.20	128.45	107.62	10.55	18.79	156.27	48.50	16.81	20.22	243.63	142.11	227.05	242.51	642.15	113.07	618.42	37.06	26.30	307.66	55.93	119.72	132.13	284.42	237.46	185.14
41	ER5b	ExonRegion	0	86.00	82.04	198.31	22.72	146.72	158.33	102.29	5.97	19.89	147.71	87.34	20.00	19.76	252.39	198.19	257.05	217.29	654.85	108.20	706.72	57.47	22.81	382.94	49.71	129.57	141.87	261.57	273.28	184.20
42	E5_Da	KnownBoundary	0	85.35	86.58	143.48	30.20	111.12	224.11	99.78	0.00	27.01	156.03	88.07	28.40	21.02	203.11	213.47	259.48	212.33	822.08	153.76	853.37	49.94	11.38	376.71	49.23	136.01	93.98	251.72	233.42	143.48
43	ER5c	ExonRegion	0	60.13	147.41	83.52	53.98	167.06	147.69	118.89	4.73	110.23	167.97	71.73	26.21	29.93	204.01	723.76	266.25	203.34	624.84	138.59	833.00	69.85	25.11	286.63	176.79	173.51	82.06	503.40	222.33	254.56