Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SPDYE2	Gene	0	22.73	11.35	10.91	12.35	8.77	12.65	7.14	13.27	19.94	21.21	8.17	54.65	8.96	20.07	55.83	49.75	44.45	22.36	26.26	6.81	22.36	10.25	7.43	20.44	24.20	21.78	15.64	48.42	73.19
2	432940	Transcript	0	13.96	8.49	8.07	8.30	5.33	7.81	4.58	7.92	12.54	13.79	5.66	34.20	5.46	12.69	36.19	30.81	27.26	14.61	18.88	4.36	14.68	6.36	4.69	14.30	14.43	13.47	9.33	28.90	45.37
3	379360	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	341656	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER1a	ExonRegion	0	2.14	11.53	0.04	6.35	0.00	1.48	1.90	0.17	4.28	5.42	3.17	8.35	0.29	2.70	17.12	6.83	0.32	7.83	21.60	2.07	9.18	0.03	1.81	5.89	0.32	2.94	0.14	0.31	9.32
6	E1_Da	NovelBoundary	0	37.93	33.93	36.75	20.28	0.00	32.69	23.97	5.08	54.24	70.62	10.44	102.41	11.08	60.55	109.03	45.75	54.11	23.89	24.28	14.06	70.03	4.62	4.53	33.44	18.60	35.79	0.00	41.25	67.81
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2_Aa	NovelBoundary	0	93.26	61.66	48.81	47.88	59.83	62.31	26.43	14.33	126.87	92.23	43.15	221.92	31.59	74.76	263.30	161.03	184.04	88.62	97.11	22.58	128.63	27.76	39.05	92.36	86.38	83.68	101.38	212.98	205.34
9	ER2a	ExonRegion	0	80.43	39.42	37.23	43.47	30.86	44.70	25.12	47.32	70.56	74.93	28.59	192.22	31.57	70.69	196.08	176.07	157.34	78.57	91.69	24.11	78.92	35.60	26.34	70.74	86.27	77.12	55.69	171.93	259.35
10	E2_Da	NovelBoundary	0	70.90	33.64	29.65	61.90	21.07	40.55	16.99	32.40	51.13	63.07	15.72	115.90	16.53	41.19	176.60	130.89	75.41	32.75	64.74	18.77	69.63	22.95	12.46	61.79	51.15	36.52	42.64	147.20	237.76
11	E2a_E3a	KnownJunction	0	0.00	0.00	8.30	0.00	0.00	0.00	0.00	0.00	0.00	1.80	1.46	0.00	0.00	1.02	0.00	0.00	3.58	0.00	0.00	0.00	0.00	0.00	0.00	4.96	0.00	0.00	0.00	0.00	1.52
12	Ix_AR1	ActiveIntronRegion	0	0.00	8.80	0.00	0.00	0.00	1.25	1.84	1.68	1.02	3.94	1.08	1.13	0.00	0.00	5.00	0.00	0.00	0.00	0.00	0.00	2.60	0.00	1.65	0.00	2.60	4.29	0.00	2.97	1.22
13	E3_Aa	NovelBoundary	0	10.20	0.00	0.00	0.00	0.00	6.83	0.00	6.72	11.42	9.35	0.00	23.58	0.00	16.06	35.68	61.81	26.13	0.00	0.00	11.74	1.56	6.61	0.00	12.86	7.20	6.44	0.00	6.11	30.24
14	ER3a	ExonRegion	0	1.20	0.00	2.86	0.00	1.14	0.68	0.47	0.00	0.42	0.58	0.73	4.65	0.90	1.74	3.91	1.94	2.34	1.26	0.00	0.00	0.00	2.54	0.00	4.19	0.01	0.73	0.17	1.18	2.00
15	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	Ix_AR2	ActiveIntronRegion	0	1.02	4.61	3.68	23.92	0.00	0.66	0.00	0.88	12.46	0.00	0.00	0.00	0.62	0.00	0.00	3.22	12.49	3.67	0.00	0.00	7.45	0.00	3.45	3.08	4.09	0.00	0.00	34.93	0.00
17	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.04	0.01
18	E4_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER4b	ExonRegion	0	0.00	0.00	1.48	0.00	0.00	0.08	0.00	0.00	0.00	0.00	0.00	0.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.69	0.13
20	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46
22	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E8_Da	KnownBoundary	0	14.10	0.00	2.74	17.47	0.00	12.78	2.17	2.14	5.24	5.43	2.53	27.83	6.59	15.91	33.29	25.78	13.73	23.12	32.37	0.00	5.25	1.94	4.38	5.44	5.34	5.66	0.00	16.98	43.18
30	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00