Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC090421.1	Gene	0	13.09	10.08	10.72	41.53	7.52	8.31	19.30	21.70	16.99	11.53	9.15	22.81	11.73	14.82	31.66	18.10	9.55	10.74	24.75	23.02	6.70	4.72	5.64	13.47	14.42	6.23	6.29	15.79	8.68
2	398043	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	430801	Transcript	0	2.51	1.65	2.88	8.76	0.00	2.68	2.06	0.92	1.80	3.68	2.80	6.22	4.78	3.87	1.84	5.70	3.91	1.15	1.43	1.57	1.20	0.90	0.63	0.82	4.08	0.59	1.14	3.76	3.00
4	440088	Transcript	0	0.84	3.04	0.42	8.60	0.78	2.25	1.81	0.92	4.14	1.73	2.62	3.96	2.84	2.08	3.91	6.98	1.42	0.65	1.53	1.88	2.12	0.41	0.66	4.06	3.54	0.30	1.91	1.51	0.90
5	416650	Transcript	0	21.52	13.98	13.92	42.87	11.25	12.35	30.00	46.85	30.05	14.24	16.84	36.07	18.67	23.27	58.86	22.25	15.46	17.96	51.37	42.16	9.36	7.43	10.13	21.71	19.37	10.78	7.92	22.20	13.36
6	447009	Transcript	0	7.48	4.13	3.47	19.85	4.18	4.33	3.81	1.81	10.86	7.19	2.55	7.87	1.43	5.01	12.80	7.39	5.48	7.54	3.91	8.61	4.56	0.00	1.21	5.31	5.40	2.04	0.45	3.19	2.82
7	440725	Transcript	0	1.10	1.54	0.19	4.56	0.37	0.31	0.49	2.85	2.87	1.85	1.35	1.00	0.20	0.44	1.19	2.27	1.47	2.68	1.02	0.30	0.62	0.41	0.07	2.55	3.57	1.29	0.00	0.18	0.68
8	IG26	Intergenic	0	5.56	0.00	3.37	10.33	0.00	0.79	2.32	1.06	1.61	1.66	1.03	4.79	0.37	1.30	4.24	8.18	3.01	5.09	0.00	13.97	0.41	0.00	1.04	2.48	0.82	0.45	0.53	4.23	0.96
9	IG26_AR1	ActiveIntergenicRegion	0	1.90	0.00	0.00	0.00	0.00	0.00	0.86	0.00	0.00	1.36	0.71	1.55	0.93	0.00	2.40	6.58	0.20	0.47	0.00	6.99	0.00	0.00	0.00	0.80	0.00	0.00	0.00	2.84	0.00
10	IG26_SR1	SilentIntergenicRegion	0	6.55	0.00	4.26	13.01	0.00	1.00	2.72	1.34	2.04	1.76	1.12	5.67	0.24	1.65	4.76	8.69	3.76	6.32	0.00	15.92	0.52	0.00	1.32	2.93	1.04	0.57	0.67	4.63	1.22
11	ER1a	ExonRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.22	0.00
12	ER1b	ExonRegion	0	5.24	0.00	1.50	19.50	1.66	0.61	8.29	2.45	0.00	0.64	0.93	0.41	0.72	0.00	4.36	7.31	1.34	2.73	0.00	4.68	1.90	0.80	0.80	2.15	0.00	1.05	1.63	2.54	0.00
13	ER1c	ExonRegion	0	29.53	11.64	58.86	357.87	67.65	15.21	86.33	54.39	19.61	17.41	10.86	32.88	19.90	16.23	63.47	35.09	18.69	30.46	30.34	46.22	11.43	4.87	21.01	8.55	13.11	28.39	6.94	57.33	25.19
14	E1_Da	KnownBoundary	0	38.99	9.11	88.97	314.48	39.50	18.42	65.85	11.65	29.69	22.49	17.84	46.96	30.60	25.37	31.89	38.02	28.70	28.13	32.37	44.00	10.67	6.03	7.19	13.94	17.73	27.47	9.29	33.11	19.84
15	E1a_E2a	KnownJunction	0	2.60	0.00	7.82	10.78	19.90	1.96	18.94	22.59	10.11	0.00	2.97	10.18	6.88	2.26	8.37	3.29	9.70	0.00	0.00	3.72	3.53	0.00	4.28	0.00	1.78	7.77	2.29	18.78	20.90
16	ER1d	ExonRegion	0	42.21	23.13	43.17	92.31	13.25	20.54	69.57	58.60	36.09	35.45	21.09	70.54	38.19	42.45	83.26	38.33	31.50	34.06	59.66	75.79	13.74	17.31	15.75	30.26	34.89	23.76	10.91	47.74	27.80
17	E1_Db	NovelBoundary	0	4.95	4.85	1.54	0.00	0.00	5.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	1.10	0.00	0.00	4.13	0.00	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
18	E1b_E2a	KnownJunction	0	43.65	31.31	89.12	87.79	12.97	14.27	84.79	55.04	61.15	52.49	37.01	99.55	55.57	65.74	172.41	50.95	37.50	52.40	64.74	129.92	16.97	14.24	30.73	27.93	54.93	39.14	9.59	114.80	48.03
19	E1b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.66	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	I1_AR1	ActiveIntronRegion	0	3.59	3.86	1.28	5.44	0.33	2.09	0.92	1.96	2.82	5.53	1.37	5.91	0.91	4.68	3.78	2.46	5.44	4.90	4.99	1.26	1.15	0.27	0.83	0.47	2.61	0.93	5.48	5.22	0.81
21	I1_AR2	ActiveIntronRegion	0	2.20	2.06	0.21	0.92	0.00	2.93	0.90	0.48	4.08	4.82	2.23	1.03	0.75	2.61	2.31	4.34	1.53	4.74	6.86	4.82	2.38	0.46	0.15	0.83	2.01	0.21	0.23	1.67	1.92
22	I1_SR3	SilentIntronRegion	0	1.71	2.78	0.24	0.00	0.46	2.09	0.89	0.26	2.19	2.74	1.17	2.53	0.36	1.61	2.88	2.33	2.50	4.61	5.09	1.57	2.61	0.34	0.42	0.54	2.08	0.44	0.69	1.15	0.97
23	I1_AR3	ActiveIntronRegion	0	3.47	2.87	0.21	2.68	0.00	1.63	1.16	1.37	3.44	5.66	1.04	3.11	0.56	2.98	3.42	4.94	3.57	5.62	5.96	2.06	2.13	0.00	0.00	2.59	3.38	0.39	0.00	1.22	0.58
24	E2_Aa	NovelBoundary	0	2.42	4.85	0.00	0.00	0.00	3.91	0.00	0.00	1.49	2.04	1.61	3.04	1.56	7.16	15.95	0.00	3.74	14.64	0.00	0.00	7.74	0.00	0.00	5.38	6.74	1.76	0.00	1.89	4.59
25	ER2a	ExonRegion	0	69.06	34.14	75.80	240.28	33.18	30.94	103.53	129.85	64.62	62.64	33.17	126.07	55.77	86.66	143.90	57.29	44.77	46.03	151.28	119.84	22.46	24.42	30.17	51.93	73.88	21.42	46.15	105.08	48.90
26	E2_Da	KnownBoundary	0	9.02	0.00	4.16	28.26	0.00	17.07	2.92	0.00	4.48	1.92	1.49	6.48	0.00	15.55	8.37	7.04	4.07	4.62	0.00	11.25	7.98	0.00	2.51	7.48	5.11	2.19	0.00	0.00	6.01
27	E2a_E3a	KnownJunction	0	0.00	0.00	7.47	17.47	0.00	1.53	7.78	12.79	6.18	0.00	6.45	2.47	2.93	1.13	0.00	3.67	5.29	0.00	8.09	11.74	0.00	0.00	4.88	2.39	0.00	0.00	0.00	3.59	1.68
28	E2a_E6a	KnownJunction	0	5.66	4.56	4.83	17.26	0.00	3.57	2.17	0.00	0.00	3.71	2.94	7.50	3.44	4.59	0.00	3.44	5.22	0.00	0.00	0.00	3.37	0.00	0.00	0.00	1.67	0.00	0.00	3.68	0.00
29	E2a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	0.00	0.00	0.00	1.42	4.11	1.22	0.00	0.00	2.45	0.00	0.00	4.13	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	1.68
30	ER2b	ExonRegion	0	7.48	4.13	3.47	19.85	4.18	4.33	3.81	1.81	10.86	7.19	2.55	7.87	1.43	5.01	12.80	7.39	5.48	7.54	3.91	8.61	4.56	0.00	1.21	5.31	5.40	2.04	0.45	3.19	2.82
31	E2_Db	NovelBoundary	0	11.38	9.70	0.00	21.35	21.22	1.92	0.00	0.00	7.80	1.56	5.82	8.46	3.66	6.62	8.37	10.86	4.73	4.62	24.28	0.00	11.15	0.00	0.00	16.27	8.60	0.00	10.14	0.00	0.00
32	I2	Intron	0	4.02	1.73	0.00	17.32	1.31	2.95	3.25	0.99	15.06	3.49	2.24	3.47	2.09	3.51	5.42	9.62	4.01	3.71	9.43	7.93	4.98	0.00	0.49	4.04	2.69	0.00	0.98	2.19	1.61
33	I2_AR1	ActiveIntronRegion	0	4.04	1.74	0.00	17.41	1.32	2.97	3.26	0.99	15.13	3.51	2.25	3.49	2.09	3.53	5.45	9.67	4.03	3.73	9.48	7.97	5.00	0.00	0.49	4.06	2.70	0.00	0.99	2.20	1.62
34	E3_Aa	NovelBoundary	0	14.16	0.00	2.79	20.71	0.00	3.03	10.58	4.68	12.21	5.71	5.60	13.19	1.31	6.94	0.00	3.29	14.99	0.00	24.28	7.11	0.00	1.90	2.51	4.85	1.89	0.00	0.00	14.06	0.00
35	ER3a	ExonRegion	0	5.78	2.61	5.87	16.03	6.18	4.46	11.29	9.76	9.94	4.23	9.35	14.93	6.07	4.64	22.33	7.23	8.56	8.29	9.54	9.48	2.25	1.59	3.29	7.67	6.82	8.20	0.09	6.68	3.78
36	E3_Ab	KnownBoundary	0	2.77	0.00	2.72	0.00	13.41	7.17	27.46	14.23	9.04	2.04	3.13	19.25	5.00	5.18	15.95	13.92	10.98	9.25	0.00	10.92	3.97	0.00	4.24	13.88	12.24	8.50	0.00	12.63	1.42
37	E3_Da	KnownBoundary	0	51.38	71.26	46.14	258.61	57.18	40.17	111.45	164.38	77.99	62.36	50.33	126.02	68.43	91.77	173.81	61.43	60.91	59.98	185.90	126.45	41.84	27.32	36.00	91.46	69.67	46.65	33.65	71.94	36.94
38	ER3b	ExonRegion	0	63.59	58.80	32.20	147.47	37.86	41.52	91.72	125.75	53.59	53.52	40.70	96.85	48.19	66.15	178.10	64.03	36.73	52.40	182.69	115.61	33.42	23.56	26.34	78.01	65.75	33.58	18.93	70.04	24.87
39	ER3c	ExonRegion	0	58.78	39.32	28.43	95.12	27.56	31.07	70.91	118.01	74.04	38.49	34.72	90.82	47.02	64.03	154.26	55.85	32.52	45.60	136.47	105.27	25.84	20.71	22.23	55.06	51.28	24.13	23.68	56.33	34.60
40	E3_Db	NovelBoundary	0	13.80	8.53	11.91	99.43	6.34	4.60	20.20	16.02	30.36	10.79	4.81	27.59	32.39	12.78	51.23	22.03	11.39	13.87	80.92	59.38	1.85	4.81	2.51	16.51	11.14	9.91	0.00	12.27	14.66
41	I3_SR1	SilentIntronRegion	0	0.53	5.45	0.62	1.77	2.42	2.04	0.00	0.68	2.71	1.97	2.50	3.52	0.00	2.24	0.68	4.13	2.59	1.19	1.19	3.07	1.06	0.45	0.45	3.20	1.77	0.39	1.36	2.22	1.16
42	I3_AR2	ActiveIntronRegion	0	0.52	1.18	1.22	2.62	0.00	1.67	0.49	0.90	4.44	2.28	3.77	3.23	0.24	2.86	2.35	1.04	3.45	0.23	1.17	3.35	0.87	0.88	0.00	3.67	4.18	1.53	1.11	1.19	0.73
43	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00	3.16	1.59	0.00	17.54	0.00	4.32	0.00	0.00	0.00	3.89	0.00	1.82	13.64	1.89	0.00	0.00	2.02	3.04
44	ER4a	ExonRegion	0	0.82	1.36	0.00	5.50	0.00	0.00	0.77	1.41	1.87	1.11	0.13	1.18	0.00	1.21	0.00	1.54	1.14	1.13	1.23	0.00	0.00	0.00	0.00	1.89	3.87	0.11	0.00	0.00	2.05
45	E4_Da	NovelBoundary	1	143.75	72.71	73.72	154.87	96.23	80.50	100.76	125.21	141.27	146.44	90.41	75.81	80.95	105.00	128.76	148.79	174.90	5.14	7.87	85.35	107.26	59.75	47.33	84.94	117.75	139.30	92.09	150.16	100.36
46	E4a_E5a	KnownJunction	0	2.24	0.00	0.00	8.20	0.00	0.00	0.00	5.67	3.59	2.96	2.75	0.00	0.00	0.00	0.00	3.82	1.89	4.62	0.00	0.00	1.52	0.00	0.00	5.08	4.24	3.26	0.00	0.00	0.00
47	I4	Intron	0	0.34	4.32	0.00	1.14	0.00	1.53	0.00	0.59	1.16	1.61	0.95	1.47	0.93	0.79	1.74	1.97	3.32	0.31	3.05	0.00	0.68	0.00	0.00	4.10	3.63	0.00	0.00	1.81	1.48
48	I4_SR1	SilentIntronRegion	0	0.34	4.32	0.00	1.14	0.00	1.53	0.00	0.59	1.16	1.61	0.95	1.47	0.93	0.79	1.74	1.97	3.32	0.31	3.05	0.00	0.68	0.00	0.00	4.10	3.63	0.00	0.00	1.81	1.48
49	E5_Aa	NovelBoundary	1	1758.06	1776.62	1252.10	1178.97	1239.25	1820.62	1503.66	1690.55	2853.46	2736.35	1439.18	1832.98	1531.36	1548.81	2575.61	2017.20	3266.48	238.37	103.85	1228.00	1806.21	917.51	1229.27	1517.88	1633.04	2578.71	1287.46	2846.45	1339.82
50	ER5a	ExonRegion	0	0.24	3.27	0.57	0.00	1.11	0.94	0.69	1.47	3.16	1.49	1.18	1.83	0.59	0.10	3.56	1.44	1.36	2.30	1.82	0.91	0.33	1.24	0.21	0.66	2.60	0.51	0.00	0.55	0.00
51	E5_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	5.09	3.83	3.16	6.26	1.34	0.00	8.77	7.04	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	1.72
52	I5	Intron	0	0.57	1.82	0.18	0.38	0.09	0.90	0.29	1.04	3.17	1.10	0.46	1.51	1.56	0.27	1.45	0.88	1.43	0.22	0.17	0.19	1.41	0.26	0.16	1.79	3.89	0.33	0.16	0.55	0.64
53	I5_AR1	ActiveIntronRegion	0	0.40	1.79	0.00	1.33	0.00	1.78	0.75	2.05	3.01	1.07	0.00	0.80	0.84	0.42	3.89	0.92	1.11	0.00	0.00	0.00	2.12	0.33	0.00	1.99	3.98	0.00	0.00	0.91	0.37
54	I5_SR2	SilentIntronRegion	0	1.37	2.10	0.30	0.00	0.00	1.25	0.37	0.67	6.59	1.18	0.43	0.79	1.77	0.17	1.76	0.68	1.36	0.94	0.29	0.00	1.17	0.33	0.00	3.13	4.69	1.15	0.00	0.89	0.30
55	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.92	0.00	2.54	9.93	2.00	0.00	4.52	8.41	0.00	0.00	0.00	1.17	0.00	0.00	0.00	5.78	0.00	0.00	7.84	3.60	0.00	0.00	0.00	7.89
56	ER6a	ExonRegion	0	1.86	0.39	2.79	9.03	0.00	2.82	1.76	2.75	4.01	5.53	5.45	7.75	4.25	5.20	5.52	7.22	5.12	3.45	4.29	4.71	0.23	2.70	1.90	2.45	5.72	1.77	3.43	7.60	4.48
57	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	6.91	0.00	0.00	2.68	1.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	5.86	12.69	0.00	0.00	0.00	2.87
58	E6a_E7a	KnownJunction	0	0.00	0.00	1.02	0.00	0.00	1.65	2.23	0.00	1.40	1.80	0.00	3.40	6.66	1.82	0.00	6.43	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.85	0.00	0.00	0.00	4.52
59	E7_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	8.56	0.00	1.61	0.00	1.27	0.00	0.00	0.00	2.30	0.00	0.00	3.64	1.89	0.00	0.00	0.00	4.85	0.00	0.00	3.95	0.00
60	ER7a	ExonRegion	0	2.57	1.72	2.22	2.65	2.20	1.86	3.42	3.37	5.17	4.76	5.45	9.40	7.86	6.05	4.91	12.72	2.50	0.87	5.05	5.42	2.45	1.79	3.92	3.95	6.02	3.33	1.95	7.29	3.11
61	E7_Da	KnownBoundary	0	0.00	4.75	0.00	10.78	0.00	0.00	2.92	6.32	1.13	3.20	14.80	6.02	4.11	8.62	0.00	13.00	2.09	0.00	0.00	4.13	1.85	2.24	2.51	0.00	3.86	2.19	4.12	1.98	3.60
62	ER7b	ExonRegion	0	1.68	6.08	0.83	17.20	1.56	4.50	3.62	1.84	8.28	3.47	5.24	6.26	3.97	4.16	7.82	13.97	2.84	1.30	3.07	3.76	4.23	0.82	1.31	8.12	7.07	0.59	3.81	3.03	1.80