Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF789	Gene	0	25.69	22.34	12.56	67.65	7.56	17.75	18.95	13.15	25.90	27.28	8.72	77.58	10.75	26.26	41.59	98.03	63.05	42.86	39.15	22.31	23.94	6.10	11.94	20.54	25.08	15.91	22.71	32.86	47.98
2	331410	Transcript	0	11.22	12.37	1.97	23.77	7.57	6.64	4.00	2.66	10.77	6.50	2.57	26.58	3.66	7.88	15.14	47.10	18.79	15.93	17.56	3.30	9.27	1.87	3.66	16.06	9.16	3.93	4.20	7.94	17.02
3	483089	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	481472	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	448667	Transcript	0	4.87	5.70	4.28	2.32	2.06	3.21	1.72	5.84	5.89	4.83	2.14	11.42	0.56	6.76	6.11	20.43	10.10	7.11	17.30	10.42	1.51	2.84	2.27	3.41	9.69	1.97	5.79	10.38	12.90
6	488485	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	493485	Transcript	0	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01
8	447047	Transcript	0	0.67	0.00	0.88	0.00	0.00	0.00	1.04	0.00	1.06	0.75	0.00	1.36	0.00	1.49	3.76	1.50	2.85	1.01	5.89	0.94	0.68	0.00	0.00	0.00	1.28	0.00	0.00	6.11	1.44
9	379724	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	465438	Transcript	0	21.71	7.12	8.22	21.64	5.92	8.26	4.54	12.29	7.11	14.59	1.90	38.35	2.66	16.19	15.48	38.88	36.33	34.91	13.97	9.33	13.81	2.66	2.39	6.92	10.83	7.20	4.22	17.97	17.41
11	468705	Transcript	1	15.28	8.15	7.47	14.58	1.52	8.44	3.53	6.40	11.48	16.79	8.21	35.52	4.32	17.00	13.42	40.46	43.78	23.81	7.92	7.08	17.26	1.64	0.58	10.78	9.80	8.92	4.56	34.69	19.22
12	481108	Transcript	0	18.45	23.58	5.89	27.65	0.73	14.44	13.98	9.88	26.20	30.55	8.24	61.47	3.00	25.76	50.32	138.09	85.93	27.87	35.02	12.61	20.10	1.70	2.03	19.44	20.26	6.70	2.07	33.54	31.53
13	494186	Transcript	0	4.05	4.94	4.31	22.16	0.84	3.66	3.98	2.06	1.98	3.10	2.15	8.59	0.17	3.53	9.17	6.33	3.97	5.54	4.11	1.89	2.94	1.08	1.86	1.85	4.05	3.65	2.36	3.78	3.62
14	417333	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	394183	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	454931	Transcript	0	23.42	11.63	2.09	0.00	5.16	9.48	0.00	3.83	19.76	12.94	6.01	70.21	10.60	24.62	71.36	104.88	44.37	18.37	15.96	9.84	13.40	5.49	3.94	31.40	11.74	12.10	0.00	5.03	31.30
17	IG36_SR3	SilentIntergenicRegion	0	0.63	0.00	0.49	1.05	0.71	1.41	1.18	0.27	0.00	0.63	0.00	0.36	0.00	0.00	1.48	1.81	0.65	1.97	2.80	0.40	1.25	0.00	0.53	0.63	0.84	1.15	2.94	1.43	2.44
18	ER1a	ExonRegion	0	7.80	0.00	0.00	32.91	5.78	1.98	5.48	0.00	0.70	0.00	0.00	7.92	0.31	0.07	0.00	16.85	3.55	11.84	0.72	0.00	0.94	1.01	1.45	0.00	1.43	5.06	1.83	6.65	4.64
19	E1_Ab	KnownBoundary	0	2.48	0.00	0.00	0.00	7.07	1.65	0.00	0.00	0.00	0.00	0.00	1.30	0.00	0.00	0.00	6.66	3.89	4.62	0.00	0.00	2.01	0.00	2.12	0.00	0.00	0.00	0.00	0.00	1.55
20	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.70	2.02	0.00	0.00	1.58
22	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	10.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E1_Af	KnownBoundary	0	0.00	0.00	0.00	10.35	0.00	0.00	2.75	0.00	0.00	0.00	0.00	2.95	0.00	0.00	0.00	6.96	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45
24	ER1b	ExonRegion	0	10.72	0.00	0.00	40.22	9.96	4.12	8.06	0.00	2.25	0.00	0.00	24.74	3.90	0.91	0.00	39.23	11.02	13.65	9.05	0.00	1.43	1.80	1.81	0.00	0.71	4.71	0.92	8.15	8.05
25	ER1c	ExonRegion	0	10.72	0.00	0.00	43.88	9.96	4.12	8.06	0.00	2.25	0.00	0.00	24.74	3.90	0.91	0.00	37.96	11.02	10.92	9.05	0.00	1.43	1.80	1.81	0.00	0.00	3.14	0.00	6.52	6.71
26	ER1d	ExonRegion	0	5.48	0.00	0.06	71.50	9.13	3.36	7.28	0.00	2.43	0.00	0.00	30.30	4.62	1.26	4.36	34.31	15.97	10.01	9.05	0.00	1.43	1.80	1.31	0.00	0.00	1.66	0.00	7.15	9.47
27	E1_Ag	KnownBoundary	0	0.00	0.00	26.01	414.13	25.79	3.61	36.45	4.68	3.11	10.43	1.36	62.53	7.61	3.21	36.67	100.29	34.28	32.75	72.83	0.00	14.88	4.52	28.81	2.57	4.58	10.99	2.29	20.49	47.18
28	ER1e	ExonRegion	0	4.29	0.00	1.12	102.38	9.96	2.75	10.08	0.00	3.37	0.00	0.00	42.05	6.50	1.81	11.20	25.31	22.04	13.65	9.05	0.00	1.43	1.80	1.81	0.00	0.00	1.57	0.00	4.89	16.11
29	ER1f	ExonRegion	0	0.93	0.00	10.59	227.96	13.21	2.21	18.67	1.04	2.30	4.02	0.67	55.44	9.15	2.41	17.05	45.55	26.31	21.36	25.38	0.00	1.92	1.10	12.26	1.22	2.18	5.47	0.00	5.88	28.71
30	ER1g	ExonRegion	0	3.15	0.00	18.92	134.59	11.94	1.92	10.21	5.25	2.36	3.07	0.37	32.13	3.89	1.40	7.22	25.60	17.77	9.20	12.42	3.28	0.97	2.98	6.80	0.73	3.34	5.42	0.00	9.31	17.99
31	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E1a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E1a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00
34	Ix	Intron	0	6.85	5.69	2.94	7.26	1.82	5.27	2.26	1.86	5.29	8.39	1.21	14.82	1.66	5.09	13.37	17.96	14.56	17.64	7.49	4.18	7.37	1.34	0.67	5.04	5.56	3.52	1.66	18.76	10.45
35	Ix_AR1	ActiveIntronRegion	0	9.99	7.70	4.13	8.85	1.34	7.73	2.76	2.78	6.00	10.30	1.31	20.97	1.42	6.70	19.63	28.70	23.33	26.27	11.83	4.91	11.54	0.49	0.74	5.01	7.84	6.03	1.26	24.14	14.58
36	Ix_SR1	SilentIntronRegion	0	4.30	5.39	1.40	8.39	2.45	2.99	1.01	1.23	2.25	5.55	0.20	8.77	0.98	3.63	6.76	10.02	4.74	10.20	3.74	4.02	2.15	1.81	0.00	3.60	3.59	1.31	1.23	13.63	2.58
37	Ix_SR2	SilentIntronRegion	0	5.51	3.38	3.07	3.95	1.79	4.53	2.96	1.35	7.72	9.00	2.18	13.34	2.73	4.56	12.33	12.44	13.69	14.34	5.86	3.39	7.59	1.98	1.33	6.71	4.71	2.59	2.69	17.34	13.64
38	E2_Aa	NovelBoundary	0	10.79	4.85	11.11	49.39	14.59	26.51	13.79	7.07	21.10	27.24	2.82	46.54	9.94	21.56	16.14	136.32	55.06	43.15	16.18	8.27	32.93	4.96	2.17	13.52	7.20	25.41	8.75	40.71	36.15
39	ER2a	ExonRegion	1	15.28	8.15	7.47	14.58	1.52	8.44	3.53	6.40	11.48	16.79	8.21	35.52	4.32	17.00	13.42	40.46	43.78	23.81	7.92	7.08	17.26	1.64	0.58	10.78	9.80	8.92	4.56	34.69	19.22
40	E2_Ab	KnownBoundary	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER2b	ExonRegion	0	19.24	8.06	9.01	30.87	0.00	13.71	24.42	18.70	15.77	15.08	5.72	72.98	18.12	21.63	41.31	106.13	54.99	42.18	30.21	21.17	18.10	4.82	12.02	13.05	17.97	22.78	5.95	36.86	35.42
42	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.83	0.00	0.00	0.00	0.00	0.00	0.00	1.82	2.21	0.00	1.59	0.00	0.00	0.00
44	E2a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	2.29	0.00
45	Ix	Intron	0	6.01	8.77	2.81	8.71	3.65	3.85	3.20	3.27	6.44	9.17	1.78	15.10	0.60	7.23	12.02	18.59	12.27	15.24	11.94	7.25	10.13	1.18	1.52	5.83	7.08	4.11	0.68	16.75	8.06
46	Ix_AR1	ActiveIntronRegion	0	4.62	16.27	5.33	6.77	2.63	5.94	4.33	3.34	4.06	8.80	1.73	24.52	0.10	6.79	22.92	21.72	15.96	18.50	10.94	8.82	9.92	4.12	1.71	10.64	5.93	3.80	2.59	27.17	12.38
47	Ix_AR2	ActiveIntronRegion	0	5.72	19.89	3.68	14.63	6.64	5.19	5.60	5.52	9.92	9.38	2.51	28.65	1.30	13.66	27.38	21.65	12.35	17.44	22.63	21.39	17.43	5.11	0.00	6.93	16.04	5.94	0.00	26.90	8.35
48	Ix_SR1	SilentIntronRegion	0	8.52	7.70	2.95	11.22	5.25	3.82	3.55	4.05	8.84	10.67	2.44	15.71	0.98	8.58	11.85	21.71	15.73	17.56	12.51	7.69	12.74	0.33	1.84	5.22	8.72	5.18	0.31	18.08	9.42
49	Ix_AR3	ActiveIntronRegion	0	0.94	2.83	0.00	3.15	0.00	1.81	0.89	0.81	1.98	5.71	0.00	2.72	0.00	3.19	0.00	7.33	0.00	6.07	9.83	2.40	2.51	0.00	0.80	2.84	2.51	1.38	0.00	2.15	0.59
50	ER3a	ExonRegion	0	15.52	9.42	4.38	42.64	3.24	5.78	4.74	9.07	6.77	8.58	2.19	36.51	2.50	8.00	18.02	19.73	26.59	15.65	13.09	7.82	6.07	3.89	13.53	3.19	11.76	16.59	6.49	12.69	15.35
51	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	0.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00
52	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER3b	ExonRegion	1	21.71	7.12	8.22	21.64	5.92	8.26	4.54	12.29	7.11	14.59	1.90	38.35	2.66	16.19	15.48	38.88	36.33	34.91	13.97	9.33	13.81	2.66	2.39	6.92	10.83	7.20	4.22	17.97	17.41
54	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER3c	ExonRegion	0	41.98	16.61	34.24	112.13	9.84	26.38	60.84	30.26	26.45	42.20	19.09	153.91	21.32	46.64	64.90	143.75	106.34	79.62	79.78	45.02	25.24	16.54	30.90	26.91	47.51	31.42	43.43	91.26	103.68
56	E3_Db	KnownBoundary	0	0.00	0.00	0.92	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	1.11	0.00	0.82	7.37	2.83	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	2.80	0.00	5.52	0.00	1.22
57	E3b_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E3b_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E3b_E4c	KnownJunction	0	3.01	0.00	16.02	20.28	0.00	3.76	5.44	5.08	0.00	5.71	11.26	36.66	10.35	15.42	15.95	14.15	13.44	5.39	0.00	10.92	3.61	11.08	9.01	5.32	13.41	8.02	0.00	9.08	19.74
60	E3b_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
61	E3b_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.89	2.44	1.46	1.11	0.00	3.67	2.39	0.00	0.00	0.00	0.00	0.00	0.00	3.05	1.86	0.00	0.00	0.00	0.00
62	E3b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	ER3d	ExonRegion	0	46.71	13.39	31.46	299.00	9.66	37.47	48.41	15.93	30.88	37.10	12.52	153.82	13.49	49.98	43.79	156.49	111.50	98.01	48.26	49.21	40.42	10.18	28.14	25.37	54.18	42.12	43.09	61.76	104.00
64	E3_Dc	KnownBoundary	0	78.10	26.66	39.59	342.95	0.00	54.52	98.07	28.07	51.34	71.94	13.41	205.69	33.15	56.70	47.64	224.98	139.92	126.12	48.55	63.68	49.74	6.76	23.59	18.90	63.80	42.49	139.20	99.16	172.83
65	ER3e	ExonRegion	0	48.05	29.78	20.40	184.88	7.32	32.31	44.29	19.13	45.47	47.31	16.36	142.02	16.83	43.23	59.53	145.40	104.76	84.09	62.54	50.97	50.18	8.95	29.18	29.09	47.73	32.02	68.98	56.83	92.84
66	E3_Dd	KnownBoundary	0	10.79	22.88	9.84	30.41	0.00	23.52	10.87	0.00	44.55	19.89	2.47	73.58	11.62	13.03	51.42	69.61	59.00	14.64	32.37	34.07	35.42	1.85	8.62	23.21	5.19	4.29	27.93	6.65	49.36
67	ER3f	ExonRegion	0	14.08	32.37	5.13	22.07	4.06	18.64	15.21	7.67	36.24	25.68	3.56	43.10	4.70	16.96	50.35	78.39	42.47	31.38	47.45	22.06	25.75	3.00	6.47	18.21	18.27	12.78	15.50	23.88	25.40
68	E3_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	ER3g	ExonRegion	0	24.00	26.94	9.90	58.87	10.78	22.31	27.83	17.51	26.22	29.37	9.15	76.33	8.72	22.33	59.56	117.45	75.63	40.41	54.14	22.03	25.54	5.11	5.35	29.68	21.76	15.41	10.76	49.01	50.25
70	E3_De	NovelBoundary	1	11.62	20.75	6.28	18.12	0.00	7.17	8.01	2.24	22.11	23.41	0.00	46.11	4.17	20.78	7.37	112.68	92.74	13.87	8.09	19.77	22.90	1.90	2.41	26.44	22.24	4.38	0.00	34.64	33.54
71	E3_Df	NovelBoundary	1	10.50	8.92	2.72	18.55	0.00	10.67	2.92	2.24	19.12	33.39	1.33	31.17	1.50	8.49	36.67	81.17	39.50	9.63	16.18	4.05	9.39	0.00	2.51	2.39	13.15	0.00	0.00	26.11	4.65
72	ER3h	ExonRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	2.02	0.00	1.12	3.61	1.49	5.57	1.62	2.27	0.00	5.69	8.51	1.36	11.31	0.00	2.14	0.00	1.81	0.54	1.43	0.00	1.83	0.41	2.35
73	E4_Aa	NovelBoundary	0	22.71	42.46	14.13	30.20	0.00	27.43	18.77	21.60	34.20	42.58	12.53	61.08	1.72	33.10	87.70	162.94	72.30	75.26	72.83	18.61	49.86	0.00	2.07	32.36	27.92	1.67	3.68	17.03	23.93
74	ER4a	ExonRegion	0	15.63	17.89	2.88	28.91	0.06	13.04	15.20	8.21	19.63	26.68	7.41	47.09	2.95	19.88	53.11	112.84	59.13	21.87	21.40	12.43	19.48	0.00	1.74	10.25	19.84	5.66	1.90	31.78	23.48
75	E4_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
76	ER4b	ExonRegion	0	23.26	26.60	9.29	34.25	7.43	24.78	15.26	13.31	33.70	27.71	7.41	62.54	4.98	27.04	52.42	117.50	84.67	24.85	47.16	14.03	26.15	3.00	3.28	22.61	21.78	4.87	7.20	33.84	32.47
77	E4_Da	KnownBoundary	0	43.83	48.18	12.08	54.35	7.37	47.12	40.51	15.73	62.12	59.76	18.16	135.36	15.99	45.58	93.88	162.79	169.22	42.38	113.29	27.04	35.78	7.00	6.80	55.63	45.50	23.90	2.53	117.54	99.27
78	E4a_E4c	KnownJunction	0	0.00	0.00	1.35	0.00	0.00	0.00	2.23	0.00	2.80	0.00	0.00	1.87	0.00	4.32	8.17	0.00	2.21	0.00	7.87	0.00	2.05	0.00	0.00	0.00	3.52	0.00	0.00	6.74	0.00
79	E4a_E6a	NovelJunction	0	0.00	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
80	ER4c	ExonRegion	0	21.27	29.27	8.91	26.40	1.41	15.85	12.76	11.55	32.77	34.41	9.08	75.84	3.06	31.65	47.53	163.34	112.73	33.88	48.63	12.78	20.72	3.39	2.32	28.62	20.68	7.75	2.24	35.31	39.58
81	E4_Ac	KnownBoundary	0	22.24	36.36	7.32	10.78	0.00	6.83	11.50	6.52	21.96	24.01	1.52	46.69	0.00	24.39	25.11	119.57	54.38	36.99	56.65	10.92	14.96	0.00	0.00	30.57	18.22	6.01	1.99	10.51	25.32
82	ER4d	ExonRegion	0	35.24	37.88	21.29	29.12	14.11	17.09	17.80	18.69	25.08	26.65	18.04	97.08	20.21	43.04	59.03	149.83	86.49	43.01	49.46	22.39	14.62	18.09	12.32	26.54	33.04	16.26	9.79	37.48	53.63
83	E4_Db	NovelBoundary	1	3.01	0.00	3.46	0.00	0.00	0.00	2.40	0.00	1.22	7.23	0.00	5.06	0.00	1.37	8.57	6.81	18.68	0.00	0.00	7.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	25.48	6.80
84	E4b_E5a	KnownJunction	0	5.19	7.56	0.00	0.00	0.00	1.96	0.00	4.78	0.00	2.04	0.00	0.00	0.00	2.44	0.00	9.87	1.40	0.00	24.28	3.97	0.00	0.00	0.00	0.00	5.19	0.00	0.00	1.75	1.58
85	E4b_E6a	KnownJunction	0	32.15	38.10	12.43	10.78	13.12	12.12	27.86	10.50	19.52	16.22	13.10	89.97	19.74	29.73	60.59	107.02	57.53	41.61	40.46	11.58	8.86	8.02	10.64	25.84	17.01	3.82	0.00	26.06	38.59
86	E4b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
87	E4_Dc	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.22	3.75	0.00	6.33	4.94	0.00	2.46	0.00	3.60	1.40	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	4.29	2.19	2.07	3.30
88	E4_Dd	NovelBoundary	0	18.99	9.70	0.00	27.39	0.00	5.60	5.21	7.07	10.66	14.86	7.78	19.70	0.00	9.35	16.54	36.80	36.44	13.87	8.09	0.00	10.51	2.14	0.00	10.95	7.50	8.15	0.00	8.76	14.53
89	ER4e	ExonRegion	1	2.14	0.00	3.37	0.00	0.00	0.00	2.69	0.00	1.12	4.33	0.00	6.60	0.00	1.81	14.93	9.28	14.02	5.46	13.58	7.50	0.00	0.00	1.21	0.72	3.81	1.05	0.00	22.82	6.26
90	ER4f	ExonRegion	1	2.02	0.00	1.31	0.00	0.00	0.00	0.90	0.00	0.37	2.25	0.00	2.20	0.00	0.15	3.11	4.50	6.34	3.03	9.81	2.81	0.00	0.00	0.00	0.00	0.32	0.00	0.00	11.59	4.32
91	Ix	Intron	0	9.26	3.98	3.61	6.20	10.55	5.64	3.92	6.37	17.08	15.91	2.57	31.98	2.10	11.44	22.07	34.28	35.82	11.38	9.67	12.77	6.78	1.95	2.74	13.02	9.58	5.77	1.58	24.66	22.12
92	Ix_SR1	SilentIntronRegion	0	9.33	4.01	3.64	6.25	10.64	5.69	3.95	6.41	17.23	16.05	2.59	32.25	2.12	11.54	22.26	34.56	36.12	11.48	9.75	12.88	6.84	1.96	2.76	13.13	9.66	5.80	1.60	24.86	22.31
93	E5_Aa	NovelBoundary	1	17.87	4.46	11.41	28.04	5.60	8.13	4.69	3.93	14.59	26.44	10.72	42.68	9.81	22.27	0.00	47.20	72.52	27.74	8.09	10.17	14.76	4.57	1.92	22.61	15.65	14.20	4.67	56.43	43.64
94	ER5a	ExonRegion	1	9.41	9.53	10.19	6.95	6.19	7.68	2.23	10.21	17.68	12.46	6.42	31.71	1.67	15.37	18.33	37.65	27.94	16.71	11.44	15.96	4.52	6.63	6.81	10.22	14.80	5.90	7.24	29.38	28.79
95	E5_Da	NovelBoundary	0	19.70	12.99	18.91	17.26	0.00	3.34	8.35	5.92	11.48	12.54	0.00	50.69	2.80	14.69	26.31	47.51	58.23	4.62	16.18	4.13	12.84	7.24	2.41	18.78	8.41	5.79	2.04	25.79	48.66
96	E5a_E6a	KnownJunction	0	0.00	0.00	2.64	0.00	0.00	0.00	2.92	2.54	0.00	0.00	0.00	2.56	0.00	2.46	0.00	13.77	0.97	4.62	16.18	11.33	0.00	1.90	0.00	0.00	9.09	0.00	10.14	0.00	8.32
97	Ix	Intron	0	8.65	6.81	6.74	14.09	2.02	7.96	5.62	7.62	8.82	13.89	2.34	23.41	2.48	11.42	17.02	46.09	26.25	10.89	8.59	12.13	8.85	1.86	2.24	9.34	10.78	6.83	3.79	26.82	14.60
98	Ix_SR1	SilentIntronRegion	0	9.04	7.60	6.47	14.17	2.27	7.75	5.88	7.99	8.90	14.29	2.44	24.93	2.64	11.58	17.08	47.62	28.31	11.82	8.96	12.17	9.48	2.10	2.44	8.66	11.40	7.00	4.27	28.69	15.83
99	Ix_AR1	ActiveIntronRegion	0	5.60	0.49	9.12	13.68	0.00	9.83	3.66	4.77	8.30	10.88	1.56	11.52	1.20	10.31	16.80	34.59	10.02	3.59	5.78	12.08	3.91	0.00	0.64	15.02	5.98	5.56	0.00	12.20	4.92
100	E6_Aa	NovelBoundary	0	14.27	8.34	12.11	10.78	0.00	36.64	8.24	11.69	7.03	30.68	3.04	29.88	1.66	22.89	17.74	97.31	42.27	4.62	8.09	7.77	19.37	4.86	2.22	15.97	6.52	1.72	5.07	19.14	24.69
101	ER6a	ExonRegion	0	11.67	16.90	18.68	31.82	15.27	14.49	13.79	3.67	12.66	22.07	9.67	77.32	15.07	19.26	31.62	115.67	55.99	26.44	34.40	12.69	10.02	4.59	11.17	15.26	20.13	8.91	6.67	32.53	58.45
102	E6_Da	KnownBoundary	1	24.66	65.83	30.82	61.04	14.44	32.00	28.55	36.43	33.92	34.91	9.43	135.69	42.32	41.08	34.48	115.36	82.99	56.25	24.28	16.13	23.75	11.67	34.77	36.91	73.91	51.41	4.87	90.22	255.10
103	ER6b	ExonRegion	0	21.34	42.21	16.52	30.36	14.60	16.08	10.59	8.95	18.28	20.65	5.77	85.19	20.15	19.63	29.37	120.74	49.52	28.53	28.73	9.64	8.82	12.66	9.57	27.89	28.52	25.09	9.20	23.14	52.03
104	E6_Ab	KnownBoundary	0	37.87	48.28	32.26	39.26	7.07	13.70	24.26	21.45	18.82	25.21	16.04	99.67	22.23	17.73	43.25	187.80	39.32	27.74	48.55	42.09	30.84	22.07	16.25	47.37	34.63	12.19	16.55	41.16	95.11
105	E6_Ac	KnownBoundary	0	21.82	29.76	27.78	49.82	12.23	13.77	30.09	29.96	21.13	26.24	4.84	71.69	16.81	22.16	54.21	94.71	65.28	47.01	32.15	33.25	11.35	18.13	16.35	30.86	22.69	23.86	4.92	21.34	68.47
106	ER6c	ExonRegion	0	22.94	24.82	21.49	36.56	9.23	13.03	23.74	10.43	15.98	25.88	9.70	92.17	15.83	17.97	45.84	124.94	67.41	30.22	26.65	9.89	13.63	9.95	17.08	29.56	23.40	16.88	7.87	25.24	59.25
107	ER6d	ExonRegion	1	29.82	53.86	21.78	27.00	9.80	25.48	16.15	24.97	41.68	43.09	7.82	160.36	41.98	51.82	51.51	175.37	113.03	38.90	40.38	14.64	16.90	13.29	14.66	36.64	40.43	29.79	25.06	62.82	113.44
108	E6_Db	KnownBoundary	1	33.15	56.81	18.21	19.41	14.74	33.11	8.70	13.49	51.86	58.84	13.86	135.21	35.09	61.77	48.43	194.54	103.63	47.01	32.37	22.58	22.90	19.59	13.79	46.12	31.71	49.57	32.60	47.85	106.73
109	ER6e	ExonRegion	0	51.48	54.79	21.40	65.07	32.17	29.88	27.14	33.98	52.47	57.60	21.61	174.77	41.63	57.67	106.79	263.58	122.61	50.56	87.99	25.08	25.31	22.96	24.18	63.70	59.81	35.28	28.99	36.61	109.09
110	E6_Dc	KnownBoundary	0	42.71	22.98	23.40	39.90	24.61	34.22	28.21	39.36	66.93	58.52	43.31	196.68	40.12	53.44	135.14	297.27	122.14	71.15	121.39	18.61	26.95	20.86	27.04	48.33	46.83	15.88	24.05	63.22	107.36
111	E6c_E6d	KnownJunction	0	23.42	11.63	2.09	0.00	5.16	9.48	0.00	3.83	19.76	12.94	6.01	70.21	10.60	24.62	71.36	104.88	44.37	18.37	15.96	9.84	13.40	5.49	3.94	31.40	11.74	12.10	0.00	5.03	31.30
112	ER6f	ExonRegion	0	43.34	55.61	13.51	17.40	19.79	25.47	13.97	30.79	62.54	56.09	24.87	155.42	39.88	59.93	107.16	249.42	118.01	48.00	89.41	26.91	36.79	17.46	18.58	66.36	46.22	18.37	30.94	41.81	93.33
113	E6_Ad	KnownBoundary	0	52.85	37.81	3.79	19.84	18.72	23.17	7.38	14.33	68.30	45.82	8.32	151.41	26.65	65.27	127.96	251.68	84.36	60.11	80.92	14.72	34.94	13.56	13.94	65.98	32.28	29.44	25.35	21.75	90.62
114	ER6g	ExonRegion	1	30.25	57.45	11.52	25.66	13.35	22.25	3.96	16.99	44.75	37.97	22.81	120.91	29.90	50.30	81.16	214.68	89.30	43.00	70.02	16.49	26.64	12.65	10.78	66.56	31.34	12.69	18.07	26.88	77.19
115	E6_Dd	KnownBoundary	1	15.04	52.74	15.82	40.55	19.31	14.46	5.72	9.01	48.21	47.06	19.68	73.55	29.20	44.42	120.99	169.67	74.37	23.12	88.79	14.56	34.29	13.56	14.68	41.21	32.85	9.53	28.28	29.34	75.50
116	ER6h	ExonRegion	1	18.05	52.02	12.84	32.14	18.88	8.79	1.78	8.61	31.85	40.39	15.58	81.09	17.73	41.91	87.27	117.71	61.57	41.00	65.05	19.94	20.33	9.31	11.35	50.98	26.56	8.22	27.81	21.08	52.06
117	E6_De	KnownBoundary	0	27.13	25.98	6.20	20.71	12.67	12.32	0.00	6.97	20.52	31.56	19.04	63.07	5.57	24.00	25.91	70.53	38.42	18.88	48.55	18.36	13.60	4.57	4.43	49.89	20.08	3.52	19.38	10.69	20.17
118	E6e_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
119	E6e_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
120	ER6i	ExonRegion	0	14.64	24.73	3.93	14.63	9.36	11.30	2.51	5.33	20.84	12.99	5.15	45.24	7.00	15.68	30.28	77.34	34.03	20.01	34.40	6.60	17.59	2.73	5.87	32.13	16.90	2.80	6.57	9.22	29.40
121	E6_Df	NovelBoundary	0	17.22	7.95	0.00	0.00	0.00	3.41	0.00	0.00	16.23	18.22	8.00	24.34	5.13	8.31	52.42	35.95	25.01	23.12	0.00	15.22	5.70	4.96	8.72	5.44	5.15	4.38	4.17	8.13	30.77
122	E7_Aa	NovelBoundary	0	2.95	4.17	2.09	0.00	14.88	3.53	0.00	0.00	5.79	5.43	0.00	8.49	2.74	3.08	0.00	17.44	8.15	0.00	0.00	0.00	5.17	2.48	4.48	11.66	6.48	1.67	0.00	0.00	14.92
123	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
124	E7_Da	NovelBoundary	0	719.50	661.10	2051.69	404.64	455.08	632.03	426.08	615.80	1340.76	735.48	733.80	1368.38	1160.69	1251.91	698.62	865.05	2595.95	46.88	0.00	482.05	720.22	441.83	661.57	787.65	612.98	1144.43	623.50	945.40	1193.54
125	Ix	Intron	0	3.72	5.61	3.92	2.84	1.79	7.16	2.82	3.70	12.82	10.25	4.68	21.17	4.77	3.78	15.74	7.15	18.74	2.63	4.48	6.65	5.04	1.59	1.65	11.08	4.75	4.17	4.07	6.56	21.01
126	Ix_SR3	SilentIntronRegion	0	2.20	3.83	2.66	2.68	2.74	4.62	1.13	3.78	6.55	5.80	1.89	18.21	2.72	2.75	11.26	8.38	13.81	1.29	4.77	4.16	2.66	2.02	1.01	7.03	3.47	3.38	1.54	5.48	15.07
127	Ix_AR3	ActiveIntronRegion	0	2.55	3.95	3.96	3.52	0.00	4.82	1.59	4.17	9.81	9.76	4.26	18.18	3.03	2.76	12.84	2.97	14.66	1.10	3.86	1.34	2.09	1.54	1.47	5.78	5.96	4.59	2.97	3.05	15.31
128	Ix_AR4	ActiveIntronRegion	0	6.72	5.36	4.78	4.35	0.00	3.90	4.13	7.50	10.35	12.71	3.21	19.67	2.66	4.07	26.74	5.44	17.85	2.57	1.27	4.18	3.16	1.48	0.55	7.57	4.28	4.11	2.22	2.72	18.16
129	Ix_SR4	SilentIntronRegion	0	4.87	8.11	4.81	2.30	2.35	11.45	4.58	2.44	20.51	13.80	7.71	25.85	8.01	5.13	18.35	8.72	25.46	4.54	5.40	12.14	9.10	1.31	2.61	18.21	5.41	4.71	7.34	10.25	29.92
130	Ix_AR5	ActiveIntronRegion	0	0.00	0.00	1.12	0.00	0.00	0.86	0.00	0.00	2.39	1.26	1.49	3.56	1.30	0.57	0.00	0.00	2.88	3.41	2.83	2.11	1.25	0.00	0.00	3.50	1.25	0.00	0.00	5.71	4.87
131	Ix_AR1	ActiveIntronRegion	0	7.37	0.00	2.87	12.32	11.19	6.30	4.60	3.17	17.03	10.76	2.05	11.28	2.60	3.37	19.00	23.37	9.41	3.31	5.49	9.03	7.32	2.07	1.04	4.93	7.34	3.60	4.20	4.67	16.12
132	Ix	Intron	0	2.76	1.38	0.36	0.00	1.05	0.29	0.43	0.39	2.88	1.24	0.77	3.70	0.97	0.58	3.95	3.19	1.92	1.24	2.74	0.59	1.83	1.16	0.77	4.61	1.23	1.01	0.00	0.70	1.72
133	Ix_SR1	SilentIntronRegion	0	2.78	1.39	0.36	0.00	1.06	0.30	0.44	0.40	2.91	1.25	0.77	3.73	0.98	0.59	3.99	3.22	1.94	1.24	2.76	0.60	1.84	1.17	0.78	4.64	1.24	1.02	0.00	0.70	1.73
134	E8_Aa	NovelBoundary	0	10.91	0.00	1.07	0.00	0.00	1.42	5.38	2.54	8.68	0.00	0.00	2.74	0.00	0.00	0.00	3.82	2.48	0.00	0.00	0.00	0.00	2.04	0.00	2.51	3.86	0.00	0.00	0.00	4.95
135	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
136	E8_Da	NovelBoundary	0	434.78	339.81	499.79	597.68	536.14	480.82	299.35	239.42	579.45	477.55	257.35	374.81	312.30	446.34	677.29	390.99	937.98	31.72	0.00	220.31	522.68	192.57	363.22	389.22	359.91	592.64	358.52	572.47	314.19
137	Ix	Intron	0	1.59	6.38	0.83	0.00	1.21	3.74	0.00	1.82	1.95	4.65	1.47	7.03	0.48	0.90	3.86	4.74	2.22	0.00	0.79	2.05	5.30	0.45	0.90	2.13	3.54	1.17	0.91	4.84	4.31
138	Ix_SR1	SilentIntronRegion	0	1.61	6.44	0.84	0.00	1.22	3.78	0.00	1.84	1.97	4.69	1.49	7.08	0.48	0.91	3.90	4.79	2.24	0.00	0.80	2.07	5.35	0.45	0.90	2.15	3.57	1.18	0.92	4.89	4.35
139	Ix	Intron	0	5.44	1.81	7.54	56.56	4.13	2.32	5.11	1.56	2.85	6.92	0.67	18.61	0.73	3.31	6.99	11.88	3.79	7.69	1.80	1.34	1.61	5.08	4.08	2.42	2.42	2.66	5.16	7.81	6.04
140	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	2.75	5.32	0.00	0.67	2.14	0.00	0.00	7.00	0.04	5.55	0.00	0.77	0.00	4.60	1.67	6.37	0.00	0.00	0.00	2.13	1.15	1.89	1.73	0.48	3.11	3.21	1.71
141	Ix_SR1	SilentIntronRegion	0	6.69	2.23	8.65	68.45	5.08	2.70	5.81	1.92	3.51	6.94	0.82	21.67	0.90	3.91	8.61	13.60	4.29	8.04	2.22	1.64	1.98	5.78	4.76	2.56	2.59	3.16	5.66	8.89	7.05
142	E9_Aa	NovelBoundary	0	0.00	0.00	1.30	9.92	0.00	1.73	0.00	0.00	1.55	1.88	4.78	0.00	0.00	1.13	0.00	0.00	3.51	0.00	0.00	0.00	0.00	2.24	1.82	2.33	1.78	0.00	0.00	1.93	1.72
143	ER9a	ExonRegion	0	8.10	9.88	8.61	44.32	1.68	7.32	7.96	4.12	3.96	6.20	4.29	15.98	0.33	7.06	18.35	12.65	7.95	11.08	8.23	3.79	5.88	2.16	3.73	3.70	8.10	7.29	4.72	7.56	7.24
144	E9_Da	NovelBoundary	0	5.60	0.00	21.20	52.63	0.00	10.13	10.99	1.89	6.46	8.59	1.52	30.09	3.15	6.87	9.37	12.93	27.21	9.25	8.09	0.00	3.85	6.22	2.51	2.51	11.25	8.33	12.57	6.07	9.57
145	ER10a	ExonRegion	0	0.00	0.00	0.00	3.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01