Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	H2AFV	Gene	0	169.39	212.50	114.74	275.47	328.27	197.42	216.89	173.70	181.15	237.60	179.22	234.25	221.95	175.40	266.52	194.99	158.00	214.77	456.41	226.25	250.34	251.90	153.85	187.11	186.37	293.24	255.86	233.62	152.28
2	421098	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	2.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.71	0.00	3.26	0.00
3	381124	Transcript	0	56.46	68.09	22.72	120.97	212.24	109.61	113.45	45.47	28.18	68.80	60.42	71.81	60.00	41.71	98.57	61.90	50.98	57.43	250.81	126.58	134.07	55.16	36.41	39.56	42.24	89.35	68.45	89.91	56.04
4	446531	Transcript	0	17.47	24.31	8.73	19.48	7.04	18.49	28.12	6.93	26.89	22.57	3.04	23.21	3.79	10.45	42.68	42.49	42.30	71.06	36.42	22.60	18.25	3.91	5.36	26.84	8.11	7.97	5.08	20.12	5.19
5	437072	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	222690	Transcript	0	43.96	63.81	69.89	86.30	171.71	80.12	56.98	60.91	84.83	113.90	114.10	95.73	40.85	67.11	44.90	88.85	69.84	56.24	198.43	53.89	112.03	36.70	57.86	82.37	65.15	67.75	133.44	97.46	40.94
7	350771	Transcript	1	44.89	12.31	51.67	27.18	12.97	22.37	17.34	56.98	38.40	31.24	19.83	60.06	56.11	15.64	68.57	34.27	53.08	60.11	40.46	27.46	13.00	34.23	47.23	8.43	30.54	49.74	8.15	53.87	61.21
8	308153	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	349299	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	2.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.71	0.00	3.26	0.00
11	ER1b	ExonRegion	0	0.65	5.35	0.60	35.20	66.73	3.01	22.55	4.32	4.10	1.38	0.00	6.96	1.48	1.24	6.90	11.42	0.28	2.92	6.32	0.13	9.19	7.84	5.17	1.15	0.76	34.21	0.64	22.56	3.43
12	E1_Ac	KnownBoundary	0	0.00	0.00	1.40	0.00	13.12	0.00	2.69	0.00	1.43	0.00	0.00	4.07	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.69	0.00	0.00	0.00	0.00	17.77	0.00	2.20	1.75
13	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Af	KnownBoundary	0	0.00	0.00	2.99	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	2.29	0.00
16	E1_Ag	KnownBoundary	0	68.54	117.02	40.29	811.22	584.77	106.24	295.29	71.12	88.53	55.60	0.00	192.71	32.77	29.80	203.31	210.14	52.15	69.61	137.35	3.72	154.75	134.72	84.22	11.07	14.89	416.14	14.91	264.29	68.73
17	ER1c	ExonRegion	0	4.29	32.85	1.12	226.69	184.32	30.24	104.82	20.25	21.35	10.11	0.00	27.21	7.79	3.63	44.80	55.68	1.00	16.38	72.41	2.81	41.37	27.04	18.08	4.30	2.86	116.30	1.83	65.20	9.40
18	ER1d	ExonRegion	0	4.29	41.39	1.12	258.87	226.16	31.34	112.88	25.04	22.92	11.26	0.00	31.42	9.35	4.54	59.37	67.82	1.00	26.20	87.80	2.81	44.79	32.45	22.78	4.30	2.86	118.82	2.56	67.81	11.01
19	ER1e	ExonRegion	0	4.29	62.41	1.12	394.88	353.69	35.74	131.02	34.98	29.21	15.88	0.00	45.76	15.59	7.26	112.01	116.41	1.00	68.23	140.30	2.81	54.20	57.69	28.93	4.30	2.86	136.73	5.49	81.50	17.45
20	ER1f	ExonRegion	0	4.29	62.41	1.12	410.07	347.94	38.49	134.12	37.39	31.54	17.55	0.46	44.05	15.99	7.47	117.18	126.34	1.00	86.70	146.22	4.32	55.96	61.71	30.74	4.30	4.07	133.59	5.49	79.62	18.27
21	ER1g	ExonRegion	0	58.13	61.40	79.59	829.64	508.59	58.36	171.82	82.23	41.81	59.92	11.76	119.65	157.03	39.69	252.03	169.26	48.80	475.66	216.27	113.90	77.64	199.59	142.51	18.64	23.48	299.62	66.72	214.23	75.51
22	E1_Ah	KnownBoundary	1	230.75	68.16	308.80	2082.72	1379.54	129.38	341.29	223.75	78.14	177.60	42.30	308.97	522.76	116.10	572.65	324.28	172.44	879.10	420.58	331.87	162.97	677.04	452.41	75.61	99.49	932.05	248.79	759.57	250.64
23	ER1h	ExonRegion	1	279.68	163.55	603.50	2386.60	1497.05	163.08	513.59	340.07	174.66	337.37	123.36	686.47	832.24	271.24	627.59	391.24	400.77	836.02	430.48	358.90	259.27	709.55	542.17	134.20	201.81	1648.31	506.10	1291.43	592.44
24	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E1a_E2a	KnownJunction	1	357.10	186.05	747.02	2167.49	786.37	211.02	443.76	376.83	252.73	384.80	152.95	891.79	696.66	397.16	571.05	527.15	590.67	772.64	509.60	250.58	247.68	488.12	358.83	165.39	243.94	1290.26	472.33	862.28	799.36
26	E1a_E3a	KnownJunction	1	44.89	12.31	51.67	27.18	12.97	22.37	17.34	56.98	38.40	31.24	19.83	60.06	56.11	15.64	68.57	34.27	53.08	60.11	40.46	27.46	13.00	34.23	47.23	8.43	30.54	49.74	8.15	53.87	61.21
27	E1a_E4a	NovelJunction	0	2.60	0.00	1.17	0.00	7.37	3.68	10.01	3.83	1.19	3.75	0.00	15.06	4.68	4.70	0.00	7.11	5.42	4.62	0.00	3.39	1.72	1.90	4.53	0.00	0.00	0.00	10.04	11.68	2.51
28	I1_AR1	ActiveIntronRegion	0	4.29	0.00	1.12	0.00	0.00	9.62	0.00	0.00	1.12	3.79	0.00	1.24	0.00	0.00	0.00	2.53	8.01	0.68	6.79	0.00	9.98	0.00	0.00	2.15	4.29	3.14	0.00	6.52	4.03
29	I1_AR2	ActiveIntronRegion	0	1.94	1.35	0.25	0.00	0.51	1.69	0.00	0.00	1.20	1.52	0.00	1.33	0.68	0.38	0.48	0.13	1.41	0.79	7.11	0.29	2.40	0.76	0.00	1.29	0.77	0.42	0.00	1.28	0.83
30	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.57	5.72	0.00	1.52	1.52	0.00	1.14	0.00	0.84	15.55	3.06	0.90	0.00	8.09	0.00	0.00	0.00	1.87	0.00	0.00	2.10	0.00	5.30	3.83
31	ER2a	ExonRegion	0	625.07	357.42	517.92	1325.56	778.02	315.42	584.15	710.75	349.56	481.35	232.83	977.85	805.37	468.68	693.69	444.47	500.77	555.07	604.60	430.68	383.08	1181.09	389.82	328.85	406.41	1609.03	560.92	962.02	757.64
32	E2a_E3a	KnownJunction	0	888.38	476.41	221.59	356.97	318.62	440.42	681.60	960.88	511.27	489.09	237.16	627.04	715.99	530.87	918.66	490.13	324.67	623.02	800.93	579.06	671.05	2147.09	368.68	531.94	514.03	1364.37	364.98	673.39	448.29
33	E2a_E4a	KnownJunction	0	64.41	72.81	3.29	0.00	7.07	16.00	19.17	40.81	23.87	19.41	16.26	16.26	34.36	14.53	24.91	13.69	20.69	13.87	8.09	31.92	31.93	65.58	13.30	26.32	36.22	70.98	12.13	21.16	32.09
34	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	I2	Intron	0	0.85	1.16	0.22	1.18	0.64	1.58	1.19	0.06	2.55	2.52	0.59	2.67	0.62	1.03	4.45	1.81	2.75	4.42	7.77	0.76	4.41	0.00	0.06	2.05	1.65	1.19	0.12	2.30	1.12
36	I2_SR1	SilentIntronRegion	0	0.85	1.17	0.22	1.18	0.64	1.59	1.20	0.06	2.55	2.52	0.59	2.68	0.62	1.03	4.45	1.81	2.75	4.43	7.79	0.77	4.42	0.00	0.06	2.06	1.65	1.19	0.12	2.31	1.12
37	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	11.20	0.00	2.40	0.00	1.55	1.96	1.36	3.83	0.00	0.00	0.00	0.00	9.18	9.25	24.28	0.00	7.86	1.85	0.00	5.26	0.00	0.00	0.00	1.84	0.00
38	ER3a	ExonRegion	0	1129.74	752.76	196.63	479.88	407.70	657.30	1229.24	1274.71	714.40	1006.21	504.54	1217.17	1497.42	929.72	1866.13	1002.12	718.31	1492.35	1354.81	1165.52	918.43	2131.17	922.50	769.17	1074.66	2792.54	811.13	1511.06	947.47
39	E3_Da	NovelBoundary	0	0.00	3.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.47	0.00	4.82	0.00	3.37	0.00	6.43	5.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.70	0.00	0.00	2.29	1.35
40	E3a_E4a	KnownJunction	1	1573.32	1043.09	164.76	699.27	805.09	899.11	1473.11	1601.67	1085.27	1300.55	821.11	1847.13	2172.74	1201.84	2097.44	1189.40	1140.41	1559.91	1658.06	1280.10	1149.28	2287.40	1320.78	1049.70	1493.32	4061.95	1711.68	2758.48	1592.80
41	E3a_E5a	KnownJunction	1	50.31	25.40	1.54	16.61	21.52	25.25	55.96	64.70	13.58	55.16	14.49	71.72	62.54	32.42	95.47	49.27	22.28	36.99	64.74	30.93	43.44	80.46	33.88	23.15	27.24	144.11	44.58	130.21	62.86
42	I3	Intron	0	1.59	2.24	0.59	0.23	0.79	1.68	0.71	0.65	2.37	1.86	0.73	0.95	0.86	0.80	3.26	1.12	2.36	3.57	5.46	0.77	3.08	0.46	0.23	1.52	1.34	1.47	1.06	2.10	0.82
43	I3_SR1	SilentIntronRegion	0	1.59	2.24	0.59	0.23	0.79	1.69	0.72	0.65	2.37	1.86	0.73	0.96	0.86	0.80	3.27	1.12	2.36	3.57	5.47	0.78	3.08	0.47	0.23	1.53	1.34	1.47	1.06	2.11	0.82
44	E4_Aa	NovelBoundary	0	3.01	0.00	2.74	0.00	6.78	6.75	0.00	9.70	4.72	3.64	8.45	1.36	1.50	6.45	0.00	3.29	2.75	0.00	0.00	7.77	17.33	0.00	4.92	2.57	1.63	6.05	0.00	10.20	1.62
45	ER4a	ExonRegion	0	1534.91	1439.30	963.01	1541.00	1897.89	971.88	1447.85	1682.25	1097.38	1661.86	905.25	1887.12	2148.44	1343.85	2168.86	1199.12	1122.26	1582.67	2433.61	1521.05	1126.05	2696.14	1288.93	1337.30	1638.00	2889.44	1899.91	2027.74	1389.62
46	E4_Da	KnownBoundary	1	16.34	8.34	11.46	27.39	0.00	12.32	0.00	4.58	15.26	17.02	3.20	21.69	1.21	8.26	16.14	24.17	37.73	92.34	40.46	14.06	3.53	4.38	0.00	19.26	7.20	8.07	6.36	12.67	1.29
47	E4a_E5a	KnownJunction	0	1389.93	1510.68	1266.42	2983.24	1944.27	1038.84	1189.38	1388.92	1252.48	1431.05	862.14	1392.05	1730.49	1242.39	1908.68	1141.44	798.97	1534.36	2248.81	1554.41	1302.18	2383.66	993.66	1374.56	1265.97	1713.26	1331.20	1152.54	875.75
48	E4a_E6a	KnownJunction	0	14.04	23.27	17.19	10.35	14.30	16.34	8.07	18.21	11.75	18.81	15.15	16.29	11.97	27.56	0.00	6.58	23.32	42.38	32.37	11.16	23.50	6.51	15.76	19.86	19.09	10.13	2.53	2.25	1.29
49	ER4b	ExonRegion	0	17.47	24.31	8.73	19.48	7.04	18.49	28.12	6.93	26.89	22.57	3.04	23.21	3.79	10.45	42.68	42.49	42.30	71.06	36.42	22.60	18.25	3.91	5.36	26.84	8.11	7.97	5.08	20.12	5.19
50	E4_Db	NovelBoundary	1	876.52	842.21	752.36	1095.50	868.90	645.80	450.97	514.23	1253.30	809.94	370.25	661.80	569.70	801.98	1024.10	761.24	1774.61	129.71	120.94	765.96	775.81	538.10	453.20	966.32	761.11	918.49	477.94	921.72	764.20
51	I4	Intron	0	11.22	23.31	2.34	12.52	6.82	15.37	14.80	1.93	32.31	13.10	0.83	13.58	0.91	5.84	43.96	45.83	17.73	76.60	53.57	27.51	16.94	3.15	4.42	23.29	10.49	5.49	1.92	20.50	3.03
52	I4_AR1	ActiveIntronRegion	0	11.29	23.47	2.35	12.61	6.87	15.47	14.90	1.94	32.53	13.19	0.84	13.67	0.91	5.88	44.26	46.15	17.85	77.13	53.94	27.70	17.06	3.17	4.45	23.45	10.56	5.53	1.93	20.63	3.05
53	E5_Aa	NovelBoundary	0	21.94	18.52	1.35	8.41	6.78	8.40	13.33	6.37	29.81	17.18	12.40	17.80	0.00	7.20	32.09	79.18	33.18	98.89	24.28	24.23	14.72	4.52	4.43	38.22	14.13	0.00	0.00	12.94	12.38
54	ER5a	ExonRegion	0	1153.37	1845.05	444.26	1736.91	1443.98	1395.77	1541.03	974.81	1407.60	1511.41	1007.50	1283.71	1656.66	1187.98	2171.00	1169.52	817.04	1341.09	2945.60	1634.60	1701.15	1804.72	928.81	1341.18	1295.27	1510.46	1468.19	1036.34	928.18
55	E5_Da	KnownBoundary	0	377.09	615.83	286.40	1001.24	1098.06	687.28	710.44	186.52	498.23	532.15	592.39	677.52	705.67	513.70	943.58	503.36	466.46	462.22	1537.12	937.06	920.61	463.52	438.57	509.81	432.69	453.52	867.22	482.70	449.84
56	ER5b	ExonRegion	0	265.97	635.27	189.66	715.48	769.77	752.87	606.47	114.26	315.64	450.95	459.40	442.23	415.64	355.61	711.41	367.20	345.12	465.96	1549.27	878.68	918.07	259.62	264.14	335.29	284.44	262.31	879.43	322.89	320.03
57	E5_Db	KnownBoundary	1	146.81	312.57	51.10	388.03	691.76	506.22	469.91	85.55	125.34	168.25	186.64	178.52	157.15	139.94	277.65	164.47	179.33	231.17	1431.92	667.46	571.25	103.80	80.23	152.65	136.50	74.93	262.40	78.94	194.22
58	ER5c	ExonRegion	1	62.61	110.79	43.90	225.33	402.97	193.97	170.95	26.25	42.77	82.43	106.36	71.90	57.46	51.01	101.66	74.53	79.67	77.87	436.88	222.23	224.71	29.87	38.94	55.97	57.24	34.60	92.33	49.61	49.22
59	E5_Dc	NovelBoundary	0	287.50	201.95	205.80	313.62	290.47	356.13	277.21	314.67	134.84	254.97	156.43	96.53	130.43	169.72	221.64	102.81	79.57	183.53	655.26	488.67	429.06	160.05	170.75	157.08	236.48	282.38	112.91	220.48	74.68
60	I5	Intron	0	33.32	100.25	26.84	103.84	264.09	131.00	62.45	30.99	35.06	140.00	153.80	73.34	21.26	66.73	23.53	110.15	57.77	65.11	411.61	79.43	178.04	22.28	45.20	62.55	61.55	40.43	196.15	79.22	29.79
61	I5_AR1	ActiveIntronRegion	0	31.17	87.75	24.49	101.33	277.09	154.44	60.90	25.64	26.88	147.42	165.39	74.26	17.46	64.99	25.20	109.03	53.35	65.08	414.52	83.70	195.45	23.08	45.37	62.56	56.36	37.83	243.66	80.30	32.24
62	I5_AR2	ActiveIntronRegion	0	36.09	115.85	29.81	107.38	249.67	103.29	64.64	37.60	45.11	131.73	140.52	72.59	25.96	69.15	21.60	112.04	63.38	65.47	410.06	74.66	157.84	21.42	45.21	62.84	68.12	43.77	139.67	78.29	26.96
63	E6_Aa	NovelBoundary	0	37.51	223.57	39.71	175.36	288.85	85.60	76.10	54.44	102.29	180.11	166.84	154.12	70.25	102.03	36.08	165.47	124.16	117.13	719.56	164.41	164.49	31.94	75.45	99.29	104.64	62.27	194.17	104.65	39.12
64	ER6a	ExonRegion	0	86.38	136.99	77.63	179.31	375.74	136.33	87.92	122.84	108.80	222.03	206.81	181.85	75.02	149.56	46.19	174.53	144.54	130.60	517.22	124.41	196.83	67.19	115.16	164.66	135.15	91.47	202.11	151.01	75.03
65	E6_Da	KnownBoundary	0	101.16	113.53	54.51	156.59	459.50	138.78	87.31	81.82	127.87	206.44	211.03	158.28	61.87	152.86	42.06	150.47	147.26	157.71	751.92	126.03	183.55	63.54	139.52	205.29	132.22	58.96	283.97	156.32	53.94
66	ER6b	ExonRegion	0	43.96	63.81	69.89	86.30	171.71	80.12	56.98	60.91	84.83	113.90	114.10	95.73	40.85	67.11	44.90	88.85	69.84	56.24	198.43	53.89	112.03	36.70	57.86	82.37	65.15	67.75	133.44	97.46	40.94
67	IG4_SR2	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	IG4_SR1	SilentIntergenicRegion	0	0.10	0.30	0.00	0.34	2.54	0.65	0.48	0.26	0.63	0.47	0.11	1.95	0.00	0.09	0.44	0.23	2.09	0.36	1.06	1.26	1.50	0.29	0.09	0.91	0.13	0.45	0.00	0.77	0.57