Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CYCS	Gene	0	160.94	116.10	89.56	505.90	992.48	161.00	196.81	366.83	192.60	124.04	149.62	176.34	217.91	83.81	180.03	145.41	52.50	88.38	178.03	149.88	153.48	183.37	165.80	87.01	110.69	126.91	163.14	200.32	175.08
2	305786	Transcript	0	380.99	380.78	853.73	2431.78	4868.64	360.49	473.31	1144.21	975.38	359.38	615.19	988.40	1232.97	421.00	619.70	259.27	332.02	168.39	794.31	325.27	355.45	381.70	532.59	254.25	463.49	740.91	1015.19	1334.11	1195.52
3	413447	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	409764	Transcript	0	0.29	1.20	0.00	7.07	20.66	0.16	1.18	0.34	1.05	2.24	1.37	0.45	0.54	0.06	1.03	1.10	0.02	0.18	1.89	1.87	0.86	4.26	0.42	1.18	0.91	0.13	0.12	2.09	1.03
5	409409	Transcript	0	0.27	0.02	0.42	3.62	16.06	0.17	1.76	2.95	0.83	0.56	0.15	1.89	0.32	0.00	0.00	0.00	0.59	1.20	0.40	0.69	0.00	1.89	2.41	1.86	0.57	0.20	0.46	2.94	0.86
6	ER1a	ExonRegion	0	117.37	33.62	96.19	587.88	562.91	82.79	344.26	137.76	80.64	162.82	92.39	102.69	112.06	29.05	178.67	209.90	56.52	71.44	124.73	84.07	90.46	101.36	112.93	49.03	84.99	209.87	102.49	242.14	119.07
7	E1_Ab	KnownBoundary	0	263.61	48.57	202.46	1084.93	910.17	170.89	669.36	359.61	212.19	342.33	179.37	198.85	246.51	70.28	442.49	439.64	117.63	85.02	80.92	188.39	214.19	169.53	191.38	76.09	160.03	421.12	189.55	339.19	269.39
8	E1_Ac	KnownBoundary	0	192.94	48.28	143.91	1089.68	672.75	108.89	295.63	264.21	133.17	140.77	87.72	101.65	220.36	55.26	154.07	172.28	85.76	36.99	56.42	91.55	90.93	176.72	141.05	35.29	137.49	212.55	94.03	233.55	126.57
9	ER1b	ExonRegion	0	706.18	376.87	518.60	3559.93	5519.10	716.08	1224.66	1731.62	816.49	544.04	514.99	575.49	762.05	276.07	1026.95	871.26	240.41	629.94	761.99	603.53	640.45	796.65	744.18	213.75	463.36	1035.56	414.26	1067.23	701.34
10	ER1c	ExonRegion	0	4209.78	1913.02	1796.32	15549.99	31633.74	4072.79	4063.63	10797.30	4253.39	2501.38	2717.89	3196.77	4181.13	1583.11	3529.76	3327.29	727.97	2102.74	3137.14	2512.22	4306.23	5256.09	4968.69	1146.30	2414.08	3978.44	3039.30	5035.06	3701.40
11	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	14.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1a_E3a	KnownJunction	1	1019.98	1093.41	2458.98	6683.44	14003.53	988.92	1065.22	3286.64	2826.75	901.41	1741.26	2843.23	3576.03	1225.26	1663.32	555.23	928.46	425.23	2239.81	877.69	967.74	1038.71	1477.49	695.83	1293.86	2004.26	2927.88	3735.11	3454.07
15	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
16	ER1d	ExonRegion	0	0.54	0.03	0.84	7.24	18.56	0.34	3.53	3.52	0.14	1.12	0.30	1.92	0.65	0.01	0.00	0.00	0.34	2.41	0.80	1.38	0.01	1.31	2.65	0.97	1.15	0.41	0.92	3.99	0.46
17	E1_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	2.04	0.00	0.00	1.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.75	0.00
18	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	13.56	0.00	0.00	2.39	1.52	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.83	0.00	0.00	0.00	0.00	2.48	2.17	2.75	0.00	0.00	0.00	1.89	1.25
19	E2_Aa	NovelBoundary	0	8.91	0.00	0.00	0.00	6.34	1.96	0.00	2.14	1.89	1.96	1.39	3.61	1.53	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	1.42
20	E2_Ab	NovelBoundary	0	0.00	4.07	0.00	0.00	0.00	0.00	5.55	0.00	3.11	8.07	4.84	1.54	2.93	0.00	0.00	0.00	0.00	0.00	8.09	3.56	1.85	2.48	0.00	3.05	1.89	0.00	0.00	4.49	5.18
21	ER2a	ExonRegion	0	0.57	2.41	0.00	14.14	26.73	0.32	2.35	0.68	2.10	4.48	2.74	0.91	1.08	0.12	2.05	2.19	0.03	0.36	3.77	3.75	1.71	6.73	0.84	2.37	1.81	0.26	0.24	4.18	2.06
22	ER2b	ExonRegion	0	0.96	2.31	0.00	0.06	3.83	0.56	0.71	0.93	0.82	1.95	0.40	1.40	1.39	0.37	0.04	1.01	0.41	0.00	0.76	0.85	1.28	1.86	0.00	0.36	3.10	0.00	0.04	1.19	0.67
23	E2_Da	NovelBoundary	0	7.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	1.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00
24	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.92	2.04	0.00	0.00	0.00	0.00	3.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	4.73	0.00	2.51	2.75	1.67	0.00	0.00	0.00	1.55
26	ER3a	ExonRegion	0	1738.77	949.56	451.42	1172.30	2043.36	1260.05	1449.97	4498.65	1715.40	728.65	780.49	1156.95	1738.13	771.24	1205.24	1206.81	344.02	753.05	1229.11	1343.22	1285.91	2239.61	955.68	693.39	928.33	962.54	686.60	1036.73	1370.92
27	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	3.30	1.80	4.27	0.00	0.00
28	E3a_E4a	KnownJunction	0	793.35	1335.49	155.32	1026.48	1224.80	1110.59	3819.89	1270.42	1324.53	2352.35	3051.50	2907.69	3636.02	1016.66	3347.37	2220.38	772.61	1204.29	3610.14	1212.45	812.68	528.28	3347.35	652.35	1222.74	1848.53	1531.68	3005.92	2845.66
29	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
30	ER4a	ExonRegion	0	840.35	870.62	913.13	2175.68	7573.33	1019.28	1488.63	1368.71	1145.60	1029.97	1633.54	1795.39	1986.72	655.86	1460.38	875.39	471.73	500.23	1400.85	1137.21	841.89	671.37	1618.34	709.24	742.71	851.87	2128.56	2089.94	1586.20
31	E4_Da	KnownBoundary	0	704.64	553.01	1785.13	7827.47	14836.47	663.34	692.59	798.39	566.57	526.44	506.60	523.15	778.47	358.63	806.85	567.39	135.08	314.65	744.51	896.05	580.20	447.13	379.62	480.74	480.88	198.48	363.04	364.71	565.32
32	ER4b	ExonRegion	0	192.87	300.63	270.14	2923.29	4461.71	406.00	510.54	241.81	422.99	350.49	452.11	383.73	505.40	137.95	499.22	301.97	110.59	178.47	565.68	345.19	330.59	137.35	241.24	179.11	218.37	94.21	394.75	236.51	295.58
33	E4_Db	KnownBoundary	1	23.12	44.79	13.93	312.11	533.93	36.99	55.33	29.41	160.64	25.01	40.59	59.67	60.38	20.30	15.95	25.63	24.06	0.00	0.00	30.93	35.78	18.13	18.32	22.79	18.68	15.32	29.47	4.04	27.80
34	ER4c	ExonRegion	0	0.64	0.00	2.61	149.03	241.84	0.51	0.07	0.00	0.82	0.50	0.14	1.30	0.01	0.00	0.00	0.20	0.02	0.00	0.00	0.00	0.53	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.59
35	E4_Dc	KnownBoundary	1	47.66	41.01	1.37	164.36	123.20	66.91	86.05	80.17	170.14	14.98	57.20	45.39	32.93	38.18	70.16	25.55	41.46	0.00	0.00	35.23	68.87	23.14	36.99	31.34	29.29	10.13	46.72	13.48	33.54
36	ER4d	ExonRegion	0	5.64	15.32	6.02	24.02	39.49	9.77	10.45	8.23	18.75	13.90	11.93	19.28	10.84	8.70	17.12	12.68	11.08	8.48	18.39	14.05	8.14	5.03	7.34	17.88	11.63	8.60	15.19	25.09	13.43