Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZMAT2	Gene	0	199.56	464.98	529.79	333.95	333.36	233.62	307.76	364.14	497.90	377.52	475.88	493.91	455.22	197.67	384.32	267.39	405.00	294.18	531.79	186.05	332.64	327.51	346.11	415.18	533.66	355.14	543.45	152.90	570.79
2	274712	Transcript	0	228.89	584.60	776.43	627.44	653.79	285.45	341.97	375.70	520.07	466.94	610.81	637.21	538.41	229.65	474.12	340.54	570.22	501.69	703.32	228.26	470.24	347.35	456.64	450.52	652.16	555.32	721.27	269.63	806.94
3	IG39_AR1	ActiveIntergenicRegion	0	0.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.71	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.00
4	IG39_SR1	SilentIntergenicRegion	0	3.10	0.90	1.68	2.00	2.72	2.68	0.00	0.67	2.35	1.03	1.04	1.35	0.12	2.65	1.53	0.69	3.33	2.31	2.67	0.29	2.00	0.18	0.00	0.60	0.38	0.00	0.00	2.27	0.20
5	IG39_SR2	SilentIntergenicRegion	0	1.63	3.50	3.15	1.89	0.00	2.55	0.00	0.87	2.88	2.52	1.68	0.55	0.69	2.34	1.22	3.75	5.71	3.37	1.27	1.28	1.67	0.61	0.24	1.14	1.32	0.21	0.00	1.08	1.36
6	ER1a	ExonRegion	0	61.36	84.46	230.71	249.74	276.36	88.44	82.98	87.05	132.44	76.90	129.06	147.85	125.09	54.34	100.93	98.38	98.86	174.20	107.68	51.93	155.89	91.43	101.65	58.62	135.12	189.12	192.21	77.69	200.58
7	E1_Da	NovelBoundary	0	2.71	0.00	3.54	0.00	0.00	3.45	5.84	0.00	1.28	1.80	0.00	1.45	1.97	2.50	0.00	0.00	5.06	0.00	0.00	0.00	3.61	0.00	2.41	0.00	0.00	0.00	4.97	0.00	0.00
8	E1a_E2a	KnownJunction	0	649.55	948.47	1965.54	2785.23	2829.53	963.72	880.76	973.52	1471.95	848.84	1261.49	1319.73	1187.83	515.69	1108.81	1117.65	854.61	2042.68	1189.59	543.25	1774.68	992.52	1101.42	634.28	1347.16	1997.95	1905.30	813.62	1860.31
9	I1	Intron	0	2.25	2.42	2.01	1.08	0.00	1.65	1.21	1.10	1.35	3.47	0.89	1.11	1.07	3.05	4.41	1.28	3.81	2.07	0.00	0.00	0.64	0.54	1.36	0.32	1.29	0.94	0.55	0.73	4.41
10	I1_AR1	ActiveIntronRegion	0	3.18	2.49	2.15	1.60	0.00	2.44	1.80	0.82	1.32	2.87	1.33	1.42	1.16	2.71	3.29	0.95	3.34	2.63	0.00	0.00	0.64	0.66	1.19	0.00	1.88	0.70	0.47	0.83	3.59
11	I1_SR1	SilentIntronRegion	0	0.97	5.87	2.30	0.00	0.00	0.13	0.00	0.48	1.98	5.29	0.00	1.24	0.25	3.46	3.07	2.71	4.82	0.13	0.00	0.00	0.51	0.82	0.82	0.00	0.20	0.00	1.92	1.44	1.98
12	I1_SR2	SilentIntronRegion	0	0.00	0.00	2.24	0.00	0.00	0.00	0.00	3.26	1.83	6.52	0.00	0.00	1.30	4.95	11.84	2.24	6.58	1.17	0.00	0.00	1.26	0.00	3.25	1.60	0.00	2.60	0.00	0.00	9.82
13	E2_Aa	NovelBoundary	0	0.00	0.00	2.74	0.00	0.00	0.00	2.86	0.00	0.00	0.00	1.46	1.30	0.00	2.33	0.00	2.75	3.15	0.00	0.00	4.13	0.00	0.00	0.00	2.93	1.86	1.80	0.00	0.00	4.19
14	I1_AR2	ActiveIntronRegion	0	0.00	0.00	0.20	0.00	0.00	0.00	0.00	1.58	0.00	1.08	0.00	0.00	1.30	2.82	6.00	0.00	2.33	2.05	0.00	0.00	0.00	0.00	1.16	1.92	0.00	2.47	0.00	0.00	7.91
15	ER2a	ExonRegion	0	231.75	399.15	1467.43	919.92	828.37	349.82	332.90	516.11	709.66	378.35	482.69	690.56	589.59	250.97	322.33	317.20	669.18	355.31	291.48	191.96	667.29	394.57	411.82	269.05	564.95	739.13	792.12	317.39	942.99
16	E2_Da	NovelBoundary	0	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	1.88	0.00	3.01	0.00	1.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E2a_E3a	KnownJunction	0	44.95	162.68	85.23	66.43	89.75	38.33	38.51	86.14	91.63	133.26	116.32	139.24	107.25	75.16	145.30	51.10	118.89	67.30	210.40	45.73	78.54	64.56	74.56	131.47	137.79	67.46	145.71	41.29	169.69
18	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E3_Aa	NovelBoundary	0	0.00	3.97	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.18	0.00	3.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.50
20	ER3a	ExonRegion	0	318.50	665.78	153.24	125.55	108.99	409.70	375.27	579.60	739.58	447.63	494.14	561.48	641.74	290.33	435.45	427.80	463.34	611.60	719.13	296.44	720.74	506.79	364.55	514.47	761.74	646.05	274.60	200.42	834.73
21	E3_Da	NovelBoundary	0	8.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	1.64	0.00	1.36	0.00	1.13	7.57	0.00	6.46	0.00	0.00	0.00	1.97	0.00	1.82	0.00	0.00	0.00	0.00	0.00	1.85
22	E3a_E4a	KnownJunction	0	149.23	605.84	178.59	133.73	150.61	126.04	527.75	226.93	315.09	772.99	1184.81	990.67	721.08	251.26	542.95	270.27	840.43	317.86	905.68	182.68	204.84	171.52	731.36	522.25	612.91	643.58	698.65	334.87	1085.88
23	E4_Aa	NovelBoundary	0	0.00	0.00	2.84	9.49	0.00	3.80	0.00	0.00	4.96	1.76	0.00	0.00	1.94	2.28	0.00	3.82	9.63	0.00	8.09	0.00	4.09	0.00	0.00	2.27	0.00	0.00	0.00	0.00	1.52
24	ER4a	ExonRegion	0	166.55	649.57	664.13	191.91	344.80	164.42	274.74	264.37	315.72	476.62	761.60	831.49	518.83	215.01	354.43	214.12	765.45	291.76	655.51	187.97	258.64	244.95	554.11	512.38	624.29	445.66	1368.77	400.95	849.12
25	E4_Da	NovelBoundary	0	2.89	7.76	3.66	0.00	6.04	4.37	0.00	0.00	0.00	3.52	0.00	1.33	1.40	0.00	0.00	0.00	2.79	0.00	7.87	3.31	0.00	0.00	0.00	5.08	5.99	0.00	0.00	0.00	0.00
26	E4a_E5a	KnownJunction	0	179.61	697.17	1619.39	384.58	673.34	199.59	180.97	307.25	323.89	397.34	445.16	507.13	369.46	205.33	430.93	265.53	632.98	379.51	743.38	287.46	284.86	282.32	293.53	620.88	696.41	207.66	683.94	260.51	464.50
27	ER5a	ExonRegion	0	242.52	798.64	1456.76	769.33	748.56	225.91	305.57	347.17	443.05	468.67	626.36	632.73	519.18	230.12	472.98	281.33	652.38	376.57	867.13	243.37	298.86	332.44	434.78	654.77	773.21	334.94	695.73	166.50	712.74
28	E5_Da	NovelBoundary	0	6.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.98	0.00
29	E5a_E6a	KnownJunction	0	275.64	978.13	324.02	1007.07	875.24	345.46	431.46	371.95	656.80	744.98	737.43	715.05	689.02	241.86	888.97	433.44	818.50	644.59	1512.17	297.06	436.36	401.87	610.45	612.09	1000.70	530.29	654.47	228.57	1236.78
30	E6_Aa	NovelBoundary	0	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
31	ER6a	ExonRegion	0	198.10	440.74	395.68	268.39	266.09	228.51	330.79	372.60	520.92	390.79	479.88	473.39	453.40	196.04	412.23	269.12	357.79	257.18	534.35	182.95	291.90	337.89	344.84	425.42	519.51	306.64	522.48	124.11	519.01
32	IG40_SR1	SilentIntergenicRegion	0	0.48	5.09	0.00	1.62	0.00	0.31	0.91	1.25	2.03	0.65	2.14	1.95	3.21	0.20	2.08	0.56	2.02	1.74	6.49	0.45	1.29	0.00	0.41	0.49	1.29	0.35	0.00	0.37	1.06
33	IG40_AR1	ActiveIntergenicRegion	0	0.00	1.60	2.56	0.00	0.00	1.83	2.34	1.79	6.50	0.48	3.13	3.51	3.63	0.15	5.98	0.85	5.78	1.92	6.13	0.46	2.43	1.18	1.80	1.98	1.27	1.31	2.13	1.26	3.10