Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LRP2BP	Gene	0	4.76	5.55	1.80	3.61	16.21	3.15	2.81	2.29	5.35	3.92	3.02	3.06	1.11	6.70	7.33	6.89	3.35	1.72	7.89	6.45	5.79	0.82	1.39	5.12	3.93	3.04	3.11	3.94	1.60
2	328559	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	1.58	0.00	0.00	0.00	8.37	0.00	0.00	0.00	0.00	0.00	7.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	362004	Transcript	0	0.00	1.64	0.00	0.00	0.36	0.10	0.14	0.00	0.80	0.21	0.09	0.44	0.28	1.04	0.80	0.00	0.29	0.19	4.85	2.21	0.31	0.00	0.00	0.00	0.82	0.00	0.00	0.00	0.00
4	IG36_AR2	ActiveIntergenicRegion	0	1.42	3.95	0.16	1.49	5.41	1.71	1.81	0.46	1.96	1.32	0.41	1.28	0.00	1.74	2.86	1.55	0.67	0.53	3.32	2.04	1.09	0.00	0.00	2.84	0.59	0.11	0.00	0.91	0.09
5	IG36_AR1	ActiveIntergenicRegion	0	1.79	2.69	0.00	0.00	0.00	1.15	3.37	0.00	0.94	2.41	1.00	0.00	0.00	0.00	3.86	0.00	0.00	0.00	0.00	3.96	0.00	0.00	1.51	0.00	2.39	1.31	0.00	1.36	0.00
6	ER1a	ExonRegion	0	11.07	8.36	3.44	4.78	10.30	2.91	4.58	6.55	6.25	4.75	2.69	2.94	1.79	9.85	11.28	11.84	3.23	1.49	9.41	12.17	5.43	1.90	0.70	6.45	6.91	2.62	0.61	4.98	1.38
7	E1_Da	NovelBoundary	0	11.56	13.28	10.24	0.00	14.44	11.28	9.50	0.00	12.94	9.59	0.00	2.62	0.00	21.14	27.31	27.85	3.78	0.00	8.09	13.56	0.00	0.00	1.92	11.25	3.75	6.05	0.00	5.53	6.50
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	1.58	0.00	0.00	0.00	8.37	0.00	0.00	0.00	0.00	0.00	7.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	I1	Intron	0	6.59	4.12	1.71	1.47	12.00	3.19	4.95	3.14	8.15	5.42	3.58	2.86	1.37	12.10	8.35	16.17	4.99	0.83	9.16	10.81	3.51	0.37	0.37	6.02	6.54	2.79	0.75	3.78	1.96
11	I1_AR1	ActiveIntronRegion	0	8.60	3.91	1.92	2.05	13.99	3.41	5.78	3.87	9.69	6.07	4.66	3.12	1.49	14.68	10.36	21.19	6.13	1.17	11.29	13.62	4.63	0.52	0.35	7.19	7.92	3.00	0.52	3.74	2.30
12	I1_SR1	SilentIntronRegion	0	1.55	4.67	1.21	0.00	7.08	2.66	2.92	1.33	4.33	3.84	0.86	2.23	1.10	5.69	3.34	3.60	2.16	0.00	3.86	3.81	0.69	0.00	0.44	3.12	3.11	2.28	1.33	3.94	1.13
13	E2_Aa	NovelBoundary	0	3.01	29.76	0.00	20.28	44.21	0.00	14.59	0.00	2.89	0.00	0.00	0.00	1.50	2.26	8.37	3.82	0.00	10.02	0.00	6.12	2.05	0.00	0.00	3.05	1.93	8.07	10.14	6.87	0.00
14	E2_Ab	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	2.92	0.00	6.82	0.00	0.00	0.00	3.28	10.32	0.00	0.00	6.08	0.00	16.18	3.72	2.05	0.00	0.00	3.05	1.93	1.97	0.00	0.00	0.00
15	ER2a	ExonRegion	0	0.00	3.28	0.00	0.00	0.71	0.20	0.29	0.00	1.61	0.41	0.17	0.88	0.56	2.07	1.60	0.00	0.57	0.39	9.70	4.42	0.61	0.00	0.00	0.00	1.63	0.00	0.00	0.00	0.00
16	ER2b	ExonRegion	0	3.01	10.34	0.96	0.00	6.90	1.66	4.51	0.00	4.93	1.87	1.87	2.25	0.61	2.74	6.89	5.80	3.40	0.93	8.30	3.17	5.18	2.53	2.55	4.44	5.32	1.47	0.00	1.53	1.56
17	E2_Da	NovelBoundary	0	5.37	12.60	0.00	0.00	12.97	0.00	0.00	0.00	3.20	1.96	0.00	3.73	0.00	5.72	7.77	2.83	4.93	0.00	0.00	6.95	0.00	0.00	2.36	5.44	1.93	8.67	0.00	0.00	0.00
18	E2a_E3a	KnownJunction	0	0.00	0.00	2.96	0.00	0.00	1.84	2.63	0.00	0.00	0.00	0.00	1.54	0.00	1.11	0.00	0.00	0.97	0.00	0.00	0.00	9.55	0.00	0.00	2.93	3.86	0.00	0.00	0.00	0.00
19	I2	Intron	0	7.63	5.35	1.19	1.13	3.48	3.80	2.71	2.62	4.17	4.57	2.07	2.63	1.95	5.29	9.31	6.76	7.55	0.79	7.33	5.17	2.14	0.14	0.86	3.91	5.54	6.34	1.01	4.38	3.59
20	I2_SR1	SilentIntronRegion	0	7.64	5.36	1.19	1.14	3.48	3.81	2.71	2.62	4.18	4.57	2.07	2.64	1.95	5.30	9.32	6.77	7.57	0.79	7.34	5.18	2.15	0.14	0.86	3.92	5.55	6.35	1.02	4.39	3.60
21	E3_Aa	NovelBoundary	0	19.17	12.51	0.00	0.00	5.60	10.24	0.00	4.28	2.44	8.63	3.01	1.20	8.02	12.19	8.17	22.11	0.00	4.62	0.00	0.00	0.00	0.00	0.00	11.19	10.42	0.00	0.00	0.00	0.00
22	ER3a	ExonRegion	0	9.59	1.04	1.33	0.00	10.79	3.89	2.07	1.84	8.78	5.81	2.07	0.86	0.00	4.48	20.54	5.53	4.09	0.00	3.97	8.68	8.53	3.23	2.06	10.23	5.58	1.41	3.18	1.00	1.91
23	E3_Da	NovelBoundary	0	5.19	4.65	1.10	0.00	0.00	0.00	5.61	0.00	5.85	1.68	0.00	3.40	0.00	7.98	23.92	3.21	1.40	0.00	0.00	7.11	1.85	0.00	2.17	8.43	6.74	0.00	0.00	8.13	6.67
24	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	12.82	0.00	0.00	2.14	0.00	0.00	4.68	0.00	0.00	1.37	9.97	0.00	0.00	0.00	8.09	0.00	3.93	0.00	2.51	2.33	0.00	0.00	0.00	2.20	1.32
25	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	8.63	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I3	Intron	0	9.77	4.29	3.69	3.57	13.91	4.60	4.31	4.20	15.18	7.82	4.83	3.47	3.13	10.83	12.39	20.63	10.74	2.20	8.42	12.44	4.17	0.90	1.80	11.33	14.15	6.05	1.96	9.75	5.38
27	I3_SR1	SilentIntronRegion	0	4.93	2.19	0.08	0.00	0.00	1.64	0.00	1.11	0.62	2.67	0.56	0.48	0.00	1.99	6.68	1.36	0.50	1.06	5.45	1.75	0.58	0.00	0.00	4.02	4.44	2.06	0.00	4.01	0.00
28	I3_AR1	ActiveIntronRegion	0	11.42	5.74	4.54	5.20	15.76	6.13	5.24	5.09	19.44	9.52	5.36	4.62	3.31	14.54	15.66	29.51	14.71	1.97	9.89	15.51	4.68	1.24	1.82	13.74	19.10	7.20	2.98	13.79	6.75
29	I3_SR2	SilentIntronRegion	0	8.93	2.64	3.71	2.20	16.55	3.14	4.48	3.93	13.78	6.99	5.71	2.69	4.15	7.99	9.04	13.01	8.02	3.08	7.10	11.52	4.77	0.67	2.54	10.19	9.49	5.71	0.96	5.01	5.22
30	E4_Aa	NovelBoundary	0	8.49	0.00	4.34	10.78	7.37	0.00	2.40	2.44	8.65	5.07	6.01	4.52	5.60	8.97	8.17	10.79	2.54	23.12	16.18	10.01	9.06	0.00	0.00	8.43	10.49	0.00	0.00	3.77	2.05
31	ER4a	ExonRegion	0	7.09	4.59	2.76	2.81	27.80	4.91	8.99	4.12	3.68	4.63	5.14	2.19	2.31	7.56	5.80	10.71	7.85	4.10	5.95	14.03	11.34	1.08	2.45	10.74	8.79	5.61	0.73	3.27	2.30
32	E4_Da	NovelBoundary	0	23.77	0.00	3.56	0.00	11.79	0.00	5.21	4.78	22.41	5.39	8.76	6.72	3.34	25.81	16.74	7.65	10.20	0.00	8.09	6.86	1.64	0.00	7.09	2.75	7.65	1.67	0.00	3.86	0.00
33	E4a_E5a	KnownJunction	0	4.48	0.00	1.47	0.00	11.94	0.00	2.92	2.54	3.05	0.00	0.00	1.66	0.00	0.00	0.00	3.75	3.71	0.00	0.00	4.13	8.70	2.29	2.46	0.00	0.00	0.00	0.00	0.00	0.00
34	I4	Intron	0	8.41	2.11	1.09	0.00	0.00	0.00	1.32	1.20	0.73	0.94	1.56	1.62	0.85	4.74	3.02	6.49	0.00	3.78	6.27	1.80	0.93	0.00	0.00	4.22	0.93	0.00	0.00	3.20	0.00
35	I4_SR1	SilentIntronRegion	0	8.63	2.16	1.11	0.00	0.00	0.00	1.35	1.24	0.75	0.97	1.60	1.66	0.87	4.86	3.10	6.66	0.00	3.88	6.43	1.85	0.94	0.00	0.00	4.33	0.96	0.00	0.00	3.28	0.00
36	E5_Aa	NovelBoundary	0	8.49	4.27	2.64	8.41	0.00	7.64	5.55	4.13	2.74	3.32	4.84	2.59	1.18	10.92	0.00	30.60	7.34	0.00	0.00	4.13	13.16	0.00	0.00	5.74	9.81	0.00	0.00	4.18	4.72
37	ER5a	ExonRegion	0	13.47	1.61	3.15	3.10	28.43	2.92	5.27	3.37	3.31	4.28	1.86	6.43	0.00	11.65	2.22	10.00	2.70	1.88	1.54	11.19	8.19	1.12	1.79	4.71	5.23	5.10	1.05	1.52	2.28
38	E5_Da	NovelBoundary	0	3.01	4.85	4.19	0.00	13.56	0.00	5.26	2.14	11.42	2.04	6.33	3.07	3.09	13.09	7.77	3.82	14.07	0.00	0.00	13.89	3.53	0.00	0.00	2.45	3.49	2.02	2.14	6.65	1.78
39	E5a_E6a	KnownJunction	0	5.19	9.70	1.52	0.00	36.11	3.49	2.29	2.19	2.74	1.56	1.39	3.40	0.00	1.09	0.00	12.62	2.12	0.00	0.00	0.00	5.78	0.00	2.51	3.05	4.58	1.89	2.04	4.58	0.00
40	I5	Intron	0	5.70	2.80	3.15	0.00	8.03	2.46	4.77	1.78	4.88	3.77	3.28	2.98	0.69	9.62	7.60	12.44	5.41	1.02	5.10	8.52	4.41	0.70	0.52	3.12	4.42	1.82	3.01	5.44	1.52
41	I5_SR1	SilentIntronRegion	0	8.61	3.78	1.71	0.00	9.26	4.42	2.24	0.94	3.73	3.50	3.21	3.13	0.98	6.11	5.16	20.54	2.41	1.55	4.06	10.76	5.75	0.00	0.00	4.67	3.44	1.11	2.38	5.49	3.14
42	I5_AR1	ActiveIntronRegion	0	5.31	2.67	3.36	0.00	7.88	2.20	5.13	1.90	5.04	3.81	3.30	2.96	0.65	10.12	7.95	11.36	5.84	0.95	5.25	8.23	4.24	0.79	0.60	2.91	4.57	1.92	3.10	5.44	1.30
43	E6_Aa	NovelBoundary	0	8.67	0.00	5.98	0.00	0.00	5.41	14.59	4.53	1.80	2.00	14.30	2.92	0.00	8.46	0.00	16.22	9.09	0.00	0.00	23.16	11.95	0.00	0.00	2.87	6.55	1.59	0.00	10.11	2.97
44	ER6a	ExonRegion	0	9.32	7.10	5.49	1.83	12.81	3.98	4.38	2.84	1.70	3.59	8.72	4.62	0.97	8.52	7.95	15.61	3.23	2.10	0.73	12.13	4.44	0.42	3.53	7.89	5.63	4.03	0.34	7.07	1.51
45	E6_Da	NovelBoundary	0	5.60	4.17	3.51	0.00	0.00	3.41	7.67	11.60	0.00	5.71	1.36	0.00	0.00	7.80	9.97	7.19	5.83	9.25	0.00	7.69	1.64	0.00	0.00	5.56	3.26	0.00	0.00	6.11	1.52
46	E6a_E7a	KnownJunction	0	5.49	0.00	3.79	0.00	13.26	0.00	2.92	0.00	0.00	3.28	1.61	5.42	1.46	2.15	9.37	3.82	0.00	4.62	0.00	3.31	1.72	0.00	0.00	8.73	0.00	0.00	0.00	0.00	0.00
47	I6	Intron	0	3.68	2.57	1.94	0.80	7.66	1.54	2.26	1.86	5.07	2.64	1.96	1.45	1.45	6.53	5.91	6.74	5.30	1.08	3.58	5.23	2.13	0.61	0.74	2.25	4.00	3.11	1.44	4.75	1.63
48	I6_AR1	ActiveIntronRegion	0	2.73	2.16	1.37	1.68	9.92	3.02	1.89	0.77	6.87	2.39	4.20	2.37	2.47	8.25	2.00	9.70	5.69	2.48	5.15	7.39	2.60	0.21	1.48	2.40	5.11	2.69	3.44	5.07	2.21
49	I6_SR2	SilentIntronRegion	0	3.80	3.69	1.77	0.54	6.89	0.79	2.55	2.70	4.26	3.07	0.82	1.15	0.99	6.25	8.19	5.24	4.78	0.44	2.76	5.30	2.01	0.54	0.27	2.42	3.50	3.00	0.69	3.68	1.26
50	I6_AR2	ActiveIntronRegion	0	7.56	0.64	3.14	0.00	4.61	0.62	4.03	2.51	5.09	1.84	0.97	1.56	1.07	5.47	7.00	9.77	8.69	0.00	2.72	1.41	1.88	2.47	1.51	2.63	5.49	3.49	0.00	12.45	2.66
51	I6_SR3	SilentIntronRegion	0	2.90	0.00	4.84	0.00	8.45	1.89	0.75	0.60	4.79	2.98	0.50	0.05	1.21	4.42	9.22	2.56	5.67	0.99	3.25	1.87	1.86	0.91	0.22	0.46	2.41	6.10	0.00	4.33	1.18
52	I6_AR3	ActiveIntronRegion	0	4.04	0.00	0.76	0.00	3.71	0.00	0.75	1.07	0.68	0.00	3.24	0.00	0.00	1.73	0.00	3.12	0.70	0.00	3.89	0.00	0.80	0.25	0.00	1.50	1.16	1.75	0.00	0.49	0.00
53	E7_Aa	NovelBoundary	0	5.07	14.54	2.77	9.92	28.00	0.00	5.03	2.19	0.00	3.64	1.49	0.00	1.43	4.43	16.54	0.00	5.96	0.00	8.09	3.72	2.05	0.00	0.00	2.51	1.63	0.00	0.00	21.21	1.85
54	ER7a	ExonRegion	0	3.16	1.88	6.26	1.84	12.07	3.21	4.61	4.24	5.62	2.43	0.88	3.01	0.27	6.20	11.27	4.96	3.70	1.37	4.71	6.05	2.23	0.00	2.09	5.35	0.87	1.37	0.00	6.66	0.58
55	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.92	0.00	3.84	2.04	2.72	0.00	0.00	7.31	8.37	10.48	1.40	0.00	0.00	0.00	2.05	0.00	0.00	2.39	0.00	0.00	0.00	2.02	0.00
56	E7a_E8a	KnownJunction	0	3.01	0.00	0.95	0.00	0.00	1.50	7.21	0.00	0.00	1.56	0.00	1.20	0.00	0.00	0.00	6.12	1.40	9.25	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
57	I7	Intron	0	1.93	2.16	0.58	1.49	4.05	1.90	1.25	1.53	5.88	1.50	3.04	1.07	0.13	4.00	2.47	4.61	1.13	0.82	4.19	2.09	3.45	0.37	0.00	2.23	2.47	2.28	0.25	2.25	0.23
58	I7_AR1	ActiveIntronRegion	0	1.66	1.66	1.06	2.78	1.89	1.86	1.30	0.71	6.05	0.53	4.15	0.75	0.00	3.33	2.59	3.66	1.40	0.99	3.72	0.55	2.20	0.00	0.00	1.39	1.33	0.48	0.00	1.89	0.00
59	I7_SR1	SilentIntronRegion	0	1.67	0.41	0.11	0.00	0.00	1.68	0.00	0.00	2.86	2.59	0.80	1.45	0.00	3.73	0.09	3.36	2.00	0.00	10.11	1.05	6.49	0.00	0.00	0.00	1.68	0.79	0.00	0.05	0.00
60	I7_AR2	ActiveIntronRegion	0	2.37	3.28	0.00	0.00	8.06	2.02	1.48	3.04	6.36	2.63	2.00	1.44	0.36	5.02	2.86	6.25	0.56	0.77	3.52	4.54	4.54	0.99	0.00	3.95	4.28	5.19	0.67	3.28	0.61
61	Ix_AR1	ActiveIntronRegion	0	0.87	2.09	0.00	0.00	5.41	1.49	0.00	0.68	2.50	0.80	0.40	0.41	0.00	1.37	8.52	1.85	0.55	0.44	4.72	1.02	1.22	0.67	0.67	0.00	0.32	0.46	1.35	0.30	0.00
62	E8_Aa	NovelBoundary	0	0.00	0.00	2.09	0.00	12.97	1.65	0.00	2.14	6.46	2.00	1.55	0.00	1.62	2.77	18.34	0.00	0.00	0.00	0.00	6.12	5.70	0.00	0.00	5.20	3.33	4.38	0.00	0.00	0.00
63	ER8a	ExonRegion	0	2.35	5.04	0.84	3.80	17.90	3.12	1.76	0.98	5.37	3.76	2.86	3.03	1.01	5.76	5.82	4.90	3.18	1.75	8.51	4.09	5.79	0.44	1.29	4.20	2.81	3.12	4.41	3.60	1.67