Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NEIL3	Gene	0	35.22	45.61	26.52	158.32	81.09	48.62	75.63	37.76	29.93	45.03	36.34	42.87	38.45	27.89	41.45	27.71	15.02	25.20	229.88	21.05	105.09	41.07	43.00	35.35	32.08	24.30	29.40	48.56	22.19
2	264596	Transcript	0	43.20	44.63	32.67	183.73	92.01	47.44	80.97	46.82	28.45	47.02	37.50	50.62	36.50	30.11	33.95	34.74	15.05	28.52	230.06	27.45	105.57	50.47	50.45	36.21	36.85	25.12	26.98	53.44	23.17
3	ER1a	ExonRegion	0	15.39	13.40	13.19	97.21	54.72	7.17	19.06	11.19	3.47	8.32	5.66	12.44	9.09	8.28	19.10	15.05	4.96	14.41	32.74	8.03	16.08	22.26	20.80	3.88	4.96	15.59	4.35	17.49	4.42
4	E1a_E2a	KnownJunction	0	32.44	36.65	6.18	32.35	0.00	30.50	47.09	36.08	12.94	26.84	11.67	37.59	18.72	13.87	64.38	67.70	7.32	46.23	161.85	43.33	62.85	31.94	56.34	25.78	17.69	34.98	9.54	48.71	14.89
5	ER2a	ExonRegion	0	41.43	29.38	15.64	82.96	36.26	33.86	50.84	36.58	15.45	38.40	26.88	32.06	25.63	23.12	31.35	30.51	9.07	20.51	158.33	21.63	60.47	34.34	58.80	27.93	22.60	36.48	24.02	57.12	16.66
6	E2_Da	NovelBoundary	0	0.00	0.00	0.00	10.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E2a_E3a	KnownJunction	0	37.69	50.22	43.65	196.71	89.16	44.39	51.61	20.65	24.82	30.84	22.40	25.90	15.19	28.23	36.48	22.41	13.73	23.12	226.59	36.88	68.31	30.09	19.11	30.63	26.25	12.40	44.18	18.69	1.85
8	ER3a	ExonRegion	0	49.20	40.42	34.01	224.85	158.19	51.03	63.76	36.55	23.26	40.67	36.43	31.25	27.41	29.95	18.00	32.86	12.76	29.98	207.18	37.87	115.59	44.76	47.70	42.23	40.28	24.27	18.23	39.50	17.89
9	E3a_E4a	KnownJunction	0	49.61	24.63	17.34	371.85	175.52	72.48	92.80	24.68	29.42	57.20	42.68	45.96	37.39	33.39	0.00	23.41	7.43	28.51	331.57	34.49	128.63	34.52	58.26	54.19	63.12	11.29	12.52	54.59	20.53
10	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER4a	ExonRegion	0	64.45	44.52	42.58	186.95	87.29	70.96	97.29	48.68	23.19	58.90	54.81	72.66	40.85	44.06	36.04	32.83	22.44	40.35	285.74	23.93	146.58	58.50	72.43	41.77	51.56	26.37	28.18	77.18	27.27
12	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	3.53	0.00	0.00	1.36	0.00	1.37	0.00	3.82	0.00	4.62	16.18	0.00	11.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65
13	E4a_E5a	KnownJunction	0	68.31	57.88	58.35	140.63	73.98	50.57	98.01	70.07	19.28	52.81	49.38	82.26	41.91	43.43	24.91	43.37	17.15	27.74	250.42	33.33	118.65	61.70	75.89	32.00	39.55	22.79	27.98	63.04	34.80
14	E4a_E6a	NovelJunction	0	2.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E4a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	1.40	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E4a_E8a	NovelJunction	0	8.43	0.00	0.00	0.00	7.07	0.00	0.00	5.08	0.00	0.00	0.00	3.07	0.00	0.00	7.57	3.82	0.00	9.50	32.37	0.00	0.00	2.19	0.00	0.00	1.86	0.00	0.00	0.00	0.00
17	I4	Intron	0	0.96	0.17	0.04	2.07	0.77	1.15	0.21	0.00	0.63	0.34	0.41	0.52	0.07	0.53	0.92	0.33	0.47	1.28	11.98	0.18	2.69	0.09	0.05	0.85	0.11	0.21	0.29	0.51	0.00
18	I4_SR1	SilentIntronRegion	0	2.93	0.00	0.00	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.83	0.00	1.13	0.68	0.00	5.82	0.00	2.60	0.00	0.00	0.98	0.00	0.00	0.00	0.74	0.00
19	I4_SR2	SilentIntronRegion	0	0.69	0.23	0.06	2.80	0.87	1.27	0.21	0.00	0.64	0.36	0.55	0.66	0.00	0.37	1.24	0.19	0.33	1.35	12.67	0.14	2.64	0.13	0.00	0.69	0.15	0.22	0.39	0.31	0.00
20	I4_AR2	ActiveIntronRegion	0	1.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.00	0.00	0.00	0.86	1.46	1.08	0.00	1.53	1.69	0.79	28.46	1.93	0.00	0.00	1.09	5.45	0.00	1.10	0.00	2.43	0.00
21	E5_Aa	NovelBoundary	0	8.73	4.07	0.00	21.35	5.89	4.95	2.69	2.29	11.33	0.00	0.00	1.87	0.00	2.08	0.00	0.00	0.00	0.00	40.46	7.61	3.73	0.00	0.00	0.00	0.00	0.00	0.00	8.81	0.00
22	I4_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	1.73	0.91	0.00	0.00	1.00	0.00	17.80	0.00	0.00	0.00	0.84	2.72	0.00	0.00	0.00	2.39	0.00
23	ER5a	ExonRegion	0	61.59	50.81	41.95	157.27	105.28	57.19	109.47	57.91	20.63	63.49	64.47	87.32	48.20	45.70	32.71	40.96	21.65	37.19	276.92	25.52	149.58	68.74	70.64	39.93	56.54	21.88	35.31	57.55	26.49
24	E5_Da	NovelBoundary	0	17.05	4.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	8.37	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00
25	E5a_E6a	KnownJunction	0	43.41	52.45	30.70	192.40	72.80	50.65	100.30	35.88	7.40	44.26	31.73	72.32	52.10	35.18	44.05	52.40	23.34	33.91	250.64	47.22	128.43	59.90	74.32	28.35	42.13	21.16	40.35	66.86	22.38
26	E5a_E7a	NovelJunction	0	2.65	0.00	1.15	0.00	18.27	0.00	0.00	4.73	0.00	1.72	0.00	5.54	1.72	3.68	0.00	3.67	4.55	0.00	16.18	0.00	1.60	0.00	0.00	0.00	0.00	1.93	0.00	2.16	0.00
27	I5	Intron	0	1.00	1.32	0.00	1.80	0.88	1.23	0.14	0.00	0.82	0.26	0.13	0.95	0.16	0.39	0.36	0.61	0.21	1.24	9.27	0.30	2.20	0.00	0.13	0.15	0.15	0.00	0.00	0.29	0.31
28	I5_SR1	SilentIntronRegion	0	1.00	1.32	0.00	1.80	0.88	1.23	0.14	0.00	0.83	0.26	0.13	0.95	0.16	0.39	0.36	0.61	0.21	1.25	9.29	0.30	2.20	0.00	0.13	0.15	0.15	0.00	0.00	0.29	0.31
29	ER6a	ExonRegion	0	49.88	39.87	47.13	211.37	85.49	45.49	103.39	59.99	32.22	51.68	38.72	80.79	51.51	33.17	31.79	30.11	23.39	31.28	207.10	33.61	118.11	69.62	69.16	34.95	49.45	30.45	32.45	79.10	20.55
30	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.29	0.00	0.00	1.30	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	6.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E6a_E7a	KnownJunction	0	70.31	39.36	40.96	279.32	95.50	35.87	115.86	73.80	47.63	59.64	44.64	69.37	43.15	31.35	0.00	36.57	15.26	36.99	291.33	31.67	117.04	88.53	61.46	31.28	26.44	17.77	50.79	71.80	12.91
32	I6_AR3	ActiveIntronRegion	0	0.00	2.46	0.74	1.65	0.00	0.61	0.00	0.00	2.92	0.64	0.00	0.00	0.00	0.80	2.05	0.00	1.98	2.56	3.94	0.00	1.27	0.00	1.60	0.00	0.00	0.00	1.62	1.97	0.00
33	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	1.87	0.00	0.00	16.74	0.00	0.00	4.62	0.00	0.00	3.57	0.00	0.00	0.00	1.55	1.85	0.00	1.75	0.00
34	ER7a	ExonRegion	0	65.75	48.71	56.03	271.60	102.00	55.42	122.93	84.71	34.85	57.44	44.66	61.33	50.13	37.33	30.57	27.70	18.81	31.35	217.61	29.99	124.74	79.07	52.23	53.45	48.58	32.02	28.80	69.79	19.04
35	E7_Da	NovelBoundary	0	8.73	9.60	1.54	31.92	0.00	3.45	0.00	5.08	5.94	1.84	2.91	4.79	0.00	0.82	0.00	3.21	0.86	13.87	32.37	10.75	1.80	4.47	4.73	0.00	0.00	3.48	0.00	9.80	0.00
36	E7a_E8a	KnownJunction	0	52.91	58.95	76.64	308.22	188.78	63.00	124.61	79.72	43.24	49.33	42.01	50.39	30.41	35.01	25.11	49.65	23.32	18.49	178.03	20.43	142.19	60.82	40.43	61.91	39.40	20.21	16.45	65.20	9.31
37	E7a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	0.00	0.00	6.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	I7_AR1	ActiveIntronRegion	0	1.45	4.50	0.56	4.82	1.65	0.23	3.06	0.93	2.24	1.22	0.00	1.15	1.97	0.61	2.49	1.67	0.36	0.00	9.14	0.93	2.61	1.52	0.61	2.14	1.21	0.50	3.40	1.66	0.23
39	I7_SR1	SilentIntronRegion	0	0.00	2.14	0.76	0.00	0.00	0.00	0.00	0.00	0.11	0.00	0.00	0.64	0.00	0.00	0.00	0.00	0.48	0.00	3.66	0.00	2.60	0.00	0.00	0.12	0.00	0.09	0.00	0.00	0.00
40	I7_AR2	ActiveIntronRegion	0	0.00	0.84	0.36	0.00	0.00	0.00	0.00	0.00	1.76	1.13	0.62	0.09	0.00	0.12	0.00	0.23	1.17	1.40	2.08	0.00	4.67	0.00	0.47	0.56	0.00	0.61	0.00	0.53	0.00
41	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	1.80	0.00	1.20	0.00	1.31	0.00	0.00	0.00	0.00	16.18	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER8a	ExonRegion	0	45.33	70.25	38.43	253.49	142.49	99.45	130.61	51.00	51.07	86.25	66.28	57.04	76.94	46.79	50.42	49.15	25.49	38.17	335.85	26.88	201.24	54.87	64.86	60.48	49.50	36.20	54.57	80.86	48.80
43	E8_Da	NovelBoundary	0	2.83	4.85	0.00	18.77	21.37	0.00	0.00	0.00	0.00	13.50	0.00	1.75	1.56	4.59	0.00	3.75	4.48	10.02	24.28	3.97	6.10	0.00	4.19	11.36	1.70	4.38	0.00	2.07	0.00
44	E8a_E9a	KnownJunction	0	6.02	51.29	19.53	154.22	70.15	48.88	64.37	54.84	45.19	71.30	44.48	52.38	45.06	26.50	59.20	35.88	12.74	32.36	226.59	29.61	121.01	58.54	25.46	39.12	34.97	45.19	19.98	49.42	50.41
45	E8a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.00
46	I8	Intron	0	1.85	3.27	0.54	4.77	2.59	2.77	1.72	0.56	2.06	2.67	0.73	2.00	0.88	1.09	2.29	1.88	1.37	2.71	16.78	0.51	6.66	0.26	0.56	1.86	0.86	0.52	0.38	1.42	0.51
47	I8_AR1	ActiveIntronRegion	0	2.47	0.00	0.77	0.00	6.76	2.22	1.40	0.85	1.81	0.67	0.00	2.98	2.53	0.21	1.06	1.15	0.34	4.00	10.32	0.64	3.95	0.42	1.67	0.50	0.66	0.36	0.00	2.64	0.00
48	I8_SR1	SilentIntronRegion	0	2.29	3.24	0.42	2.48	4.15	2.85	2.01	0.72	2.00	3.34	0.69	2.67	1.64	1.55	3.11	1.54	1.23	3.34	16.64	0.75	8.09	0.49	0.85	2.14	0.99	0.82	0.86	1.35	0.47
49	I8_AR3	ActiveIntronRegion	0	3.67	1.64	2.57	0.58	5.37	0.98	3.55	0.63	1.21	5.74	2.82	3.58	0.00	1.46	4.86	0.40	3.48	2.08	21.56	0.00	7.06	0.00	0.00	1.25	0.68	0.00	0.00	3.26	0.00
50	I8_SR2	SilentIntronRegion	0	1.42	2.63	0.54	6.96	0.92	2.65	1.26	0.35	2.32	2.46	0.84	1.06	0.17	0.86	1.23	2.33	1.55	2.30	17.49	0.39	5.35	0.09	0.26	1.23	0.58	0.30	0.04	1.28	0.52
51	I8_AR4	ActiveIntronRegion	0	1.46	8.39	0.79	7.56	1.15	3.48	2.60	0.65	1.34	1.36	0.56	2.81	0.00	0.43	4.07	1.72	1.42	1.17	16.84	0.00	7.78	0.00	0.21	4.40	1.75	0.37	0.00	1.72	1.02
52	E9_Aa	NovelBoundary	0	2.54	14.15	0.00	30.84	0.00	0.00	2.92	0.00	4.17	0.00	0.00	4.55	0.00	0.00	0.00	3.29	3.76	0.00	32.37	0.00	12.96	0.00	0.00	0.00	0.00	0.00	0.00	2.29	3.43
53	ER9a	ExonRegion	0	23.52	40.77	16.76	132.51	81.21	29.79	50.53	44.88	35.12	33.36	28.45	27.74	28.15	22.37	41.41	24.66	8.68	18.59	225.02	17.43	72.02	40.53	30.36	23.20	27.88	32.38	14.48	37.92	28.92
54	E9_Da	NovelBoundary	0	0.00	4.85	1.52	9.71	0.00	0.00	0.00	3.88	1.49	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.00	0.00	24.28	0.00	4.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	E9a_E10a	KnownJunction	0	31.97	49.35	14.25	119.92	96.09	23.44	48.86	47.43	39.92	35.15	35.56	37.44	26.72	19.68	39.66	30.37	8.91	19.14	258.96	6.62	46.37	45.70	44.67	28.59	43.91	24.12	20.43	40.57	51.53
56	I9	Intron	0	1.06	2.57	0.23	1.29	0.00	1.49	1.36	0.08	1.49	1.30	0.54	1.03	0.15	0.85	2.86	0.64	1.62	0.35	9.36	0.00	3.21	0.16	0.08	1.16	0.39	0.57	0.08	1.10	0.00
57	I9_SR1	SilentIntronRegion	0	1.07	2.58	0.23	1.30	0.00	1.49	1.37	0.08	1.50	1.30	0.54	1.03	0.15	0.85	2.87	0.64	1.62	0.35	9.38	0.00	3.22	0.16	0.08	1.17	0.39	0.57	0.08	1.10	0.00
58	E10_Aa	NovelBoundary	0	0.00	4.27	1.42	0.00	0.00	0.00	0.00	0.00	1.19	3.44	2.91	3.46	1.62	1.82	8.17	0.00	2.48	0.00	16.18	0.00	4.05	0.00	0.00	0.00	1.89	0.00	0.00	1.98	0.00
59	ER10a	ExonRegion	0	11.68	49.01	7.44	77.04	33.32	31.15	47.10	14.98	31.46	27.41	21.59	25.50	25.01	14.63	59.93	14.54	9.41	13.47	248.73	13.10	68.01	14.47	15.61	28.27	15.37	11.78	30.05	19.95	11.62
60	IG43_SR1	SilentIntergenicRegion	0	1.69	3.52	0.88	1.35	2.38	1.50	0.38	0.48	1.09	1.84	1.45	1.01	0.61	1.58	0.76	1.60	0.73	0.89	9.87	0.41	3.67	0.41	0.62	1.12	0.90	0.89	0.41	2.45	0.28
61	IG43_AR1	ActiveIntergenicRegion	0	0.14	1.57	0.37	1.59	3.25	1.43	0.00	0.28	2.58	2.27	0.50	1.61	0.49	1.61	0.68	3.05	2.24	1.55	7.62	0.41	4.75	0.06	0.11	0.34	1.09	0.58	0.00	0.96	0.30
62	IG43_AR2	ActiveIntergenicRegion	0	0.43	0.53	0.00	0.00	2.39	1.48	0.00	1.84	4.58	2.14	1.19	1.09	1.09	0.00	0.00	0.00	2.76	3.71	12.67	0.00	8.56	1.80	0.00	1.98	0.00	0.00	0.00	0.91	0.00
63	IG43_AR3	ActiveIntergenicRegion	0	0.00	9.85	0.00	0.00	4.98	4.12	0.00	1.84	6.74	2.65	1.19	1.24	0.00	0.45	0.00	0.00	1.50	2.73	12.82	0.00	4.28	0.00	0.00	2.15	0.00	0.00	0.00	1.63	0.00
64	IG43_AR4	ActiveIntergenicRegion	0	0.92	9.85	0.00	0.00	4.98	4.91	0.00	1.58	4.49	4.33	0.00	1.24	0.00	0.91	0.00	2.53	1.00	0.00	9.05	0.00	5.91	0.00	0.00	2.15	0.00	0.00	0.00	1.63	0.00
65	IG43_AR5	ActiveIntergenicRegion	0	2.14	15.88	0.00	0.00	4.15	6.42	0.00	1.84	3.00	4.33	0.00	0.82	0.00	0.91	0.00	2.53	1.92	0.00	7.92	0.00	4.87	0.00	0.00	0.00	1.19	0.00	0.00	1.22	0.00
66	IG43_AR6	ActiveIntergenicRegion	0	1.93	10.58	0.76	6.46	1.38	5.63	3.46	2.87	5.21	4.31	6.46	2.30	3.65	4.00	14.61	5.27	5.16	1.07	6.69	4.00	5.35	1.60	0.51	4.40	1.41	0.67	6.81	1.78	1.56
67	IG43_AR7	ActiveIntergenicRegion	0	2.29	21.07	2.79	11.85	0.00	7.30	8.55	6.29	4.22	6.07	6.48	5.84	9.90	8.29	28.58	10.04	6.42	3.48	10.77	6.20	3.05	3.48	0.00	9.79	1.68	3.85	4.42	0.67	2.36
68	IG43_SR3	SilentIntergenicRegion	0	3.53	10.38	1.89	6.17	1.15	5.78	7.73	4.73	4.59	3.29	11.98	3.62	5.56	6.98	15.74	13.51	6.32	3.17	9.87	4.79	6.74	1.51	0.85	5.48	2.45	2.81	10.02	5.36	1.79