Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C4orf33	Gene	0	93.06	47.03	19.78	145.39	75.94	72.49	98.79	33.76	38.47	28.45	26.34	23.83	36.18	20.79	86.85	21.39	33.48	29.07	28.05	82.57	18.35	36.81	19.73	25.63	32.10	22.45	22.55	28.06	15.88
2	281146	Transcript	0	30.73	6.77	4.60	28.77	3.06	9.03	12.92	5.63	1.19	5.83	5.82	2.66	3.08	6.91	21.42	5.09	9.21	3.14	2.04	22.28	1.54	8.05	7.09	3.87	6.47	12.12	7.53	6.89	2.41
3	425929	Transcript	0	170.48	39.84	107.92	683.18	381.65	97.39	131.08	78.85	34.17	69.13	48.45	48.91	85.19	15.66	60.26	19.09	36.66	15.45	9.00	51.91	30.73	76.40	41.72	11.97	49.29	79.93	27.90	82.89	49.14
4	ER1a	ExonRegion	0	20.98	5.74	3.52	24.96	1.67	8.01	14.63	4.50	2.11	3.09	2.49	1.62	1.36	5.03	11.67	5.33	7.99	9.10	5.36	19.60	1.52	5.80	7.45	3.02	6.25	6.50	3.76	6.98	2.14
5	E1a_E3a	KnownJunction	0	70.49	14.06	10.26	60.18	6.19	17.99	23.40	12.24	0.00	14.18	14.87	6.36	7.87	15.07	52.02	9.41	17.60	0.00	0.00	44.82	2.05	18.33	13.54	8.25	12.92	29.87	18.84	13.70	4.79
6	ER2a	ExonRegion	0	124.01	26.75	76.52	488.27	334.60	75.54	99.33	60.76	23.61	48.55	45.65	35.56	68.19	16.49	55.53	21.95	24.22	30.91	17.99	52.05	16.41	54.93	34.14	7.90	41.61	64.32	26.77	76.95	34.90
7	E2_Da	NovelBoundary	0	11.33	0.00	2.64	66.65	68.68	1.65	2.86	0.00	0.00	3.95	0.00	0.00	1.37	1.91	0.00	0.00	6.19	4.62	0.00	0.00	2.05	2.48	0.00	0.00	0.00	5.84	0.00	0.00	0.00
8	E2a_E3a	KnownJunction	0	216.95	52.93	139.32	878.08	428.70	119.25	162.83	96.94	44.73	89.72	51.25	62.26	102.19	14.82	64.98	16.22	49.09	0.00	0.00	51.77	45.04	97.87	49.30	16.03	56.98	95.53	29.02	88.83	63.39
9	I2_AR1	ActiveIntronRegion	0	0.00	5.97	0.00	0.00	1.54	0.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	0.00	0.00	0.00
10	I2_AR2	ActiveIntronRegion	0	2.21	3.98	0.00	0.00	1.89	0.00	0.00	0.00	1.65	0.00	0.27	0.00	0.00	0.00	0.00	0.00	0.61	4.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	218.33	46.16	41.37	217.92	75.69	100.22	145.86	89.35	38.43	60.16	45.22	37.87	67.55	40.17	99.46	37.80	45.91	39.49	26.85	147.21	28.70	90.86	38.93	29.50	62.04	73.78	18.99	64.88	36.87
12	E3_Da	NovelBoundary	0	13.63	7.66	0.00	10.78	0.00	5.22	0.00	0.00	1.37	0.00	3.23	0.00	0.00	2.46	0.00	0.00	2.63	0.00	16.18	4.13	1.89	0.00	0.00	0.00	0.00	0.00	0.00	1.89	1.45
13	E3a_E4a	KnownJunction	0	201.85	90.65	26.06	159.61	67.35	95.88	246.08	89.93	37.76	95.99	99.68	70.21	103.21	41.94	108.63	53.09	66.15	28.25	40.46	169.37	32.45	61.16	60.58	55.21	69.94	146.85	89.31	112.42	78.57
14	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I3	Intron	0	4.13	5.81	0.28	4.36	1.49	3.77	0.74	0.31	1.13	1.32	1.20	0.95	0.66	2.65	2.74	5.03	8.36	6.88	2.59	4.57	2.60	0.18	0.43	0.51	1.01	1.65	0.50	1.93	0.74
16	I3_AR1	ActiveIntronRegion	0	4.41	5.16	1.15	4.92	2.23	2.52	0.00	0.42	1.54	0.99	1.36	0.00	0.30	1.24	1.05	2.27	2.73	3.60	2.19	3.78	2.28	0.00	0.41	0.00	0.98	1.44	0.00	1.12	0.76
17	I3_SR1	SilentIntronRegion	0	4.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.47	0.00	0.00	0.00	0.00	0.00	1.43	0.00	3.62	0.00	0.00	0.00	0.00	2.17	2.24
18	I3_AR2	ActiveIntronRegion	0	6.97	11.22	0.31	7.34	2.25	5.87	0.98	0.68	1.14	2.39	1.83	1.77	1.13	5.22	5.60	7.74	13.93	9.15	3.24	5.08	2.34	0.50	0.65	0.85	2.05	3.13	0.81	3.89	0.85
19	E4_Aa	NovelBoundary	0	0.00	4.65	0.00	0.00	0.00	0.00	2.40	0.00	6.09	3.91	0.00	0.00	0.00	3.06	0.00	0.00	6.44	15.03	8.09	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	I3_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	4.03	0.00	2.25	0.00	0.00	0.10	0.00	0.00	0.00	2.53	1.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER4a	ExonRegion	0	196.00	59.29	53.33	142.30	142.99	102.56	153.99	66.10	31.79	64.99	58.02	56.61	85.01	31.43	110.08	27.01	60.89	41.43	56.09	157.26	24.88	69.12	54.63	40.06	69.03	75.88	63.80	85.46	42.80
22	E4_Da	NovelBoundary	0	3.01	9.60	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	1.97	2.24	0.00	3.60	4.43	4.62	0.00	8.27	2.05	0.00	2.51	2.39	0.00	0.00	0.00	0.00	0.00
23	E4a_E5a	KnownJunction	0	155.31	55.55	83.22	208.57	282.36	113.49	107.22	53.65	37.33	55.84	29.48	34.49	61.17	28.67	87.30	22.57	43.87	57.67	40.46	158.70	20.86	65.20	38.17	34.81	61.00	42.36	46.07	49.83	20.17
24	E4a_E6a	NovelJunction	0	3.01	0.00	2.32	0.00	0.00	1.76	2.92	0.00	1.89	0.00	0.00	0.00	3.60	2.10	0.00	0.00	2.09	4.62	0.00	0.00	0.00	9.67	0.00	2.69	3.79	0.00	0.00	0.00	0.00
25	I4	Intron	0	4.17	4.07	0.23	3.78	1.90	4.97	1.75	0.55	3.94	1.52	0.79	1.31	0.61	2.90	4.26	3.70	6.05	8.23	6.66	6.80	2.74	0.17	0.08	0.99	1.31	0.61	0.21	1.57	0.63
26	I4_AR1	ActiveIntronRegion	0	3.90	3.73	0.28	2.31	1.36	1.31	2.23	0.91	1.81	0.12	0.00	0.63	0.64	1.22	2.43	1.85	4.62	7.24	7.92	6.35	3.44	0.30	0.00	0.00	0.95	0.39	0.00	0.81	0.33
27	I4_SR1	SilentIntronRegion	0	3.47	3.18	0.00	0.85	3.50	2.85	1.66	0.60	2.96	0.25	0.90	1.87	0.42	2.41	4.20	2.12	2.94	4.94	1.73	3.03	1.21	0.19	0.00	0.53	0.62	0.00	0.00	0.18	0.65
28	I4_AR2	ActiveIntronRegion	0	3.15	3.84	0.00	6.58	2.05	7.25	1.75	0.31	4.52	2.24	1.08	1.16	1.02	3.93	5.44	3.81	7.34	10.84	9.72	6.64	2.98	0.00	0.30	1.20	0.84	0.52	0.76	1.42	0.71
29	I4_SR2	SilentIntronRegion	0	6.86	5.55	0.76	5.00	1.09	9.30	1.25	0.21	7.40	3.53	1.18	1.86	0.30	4.16	3.75	7.17	10.11	9.67	5.40	10.99	3.38	0.00	0.00	2.19	2.95	1.39	0.00	3.63	0.88
30	I4_AR3	ActiveIntronRegion	0	5.07	7.31	0.00	6.72	0.00	6.40	1.40	1.58	3.32	2.95	3.06	2.04	0.00	4.83	15.43	10.28	4.31	8.97	12.65	15.20	1.60	0.77	0.00	4.70	4.26	3.72	0.00	6.65	1.15
31	E5_Aa	NovelBoundary	0	8.08	0.00	1.20	10.78	0.00	10.90	5.72	0.00	13.83	0.00	1.61	0.00	0.00	5.63	25.11	0.00	12.11	13.87	0.00	0.00	5.25	0.00	0.00	0.00	0.00	0.00	0.00	5.71	2.05
32	I4_AR4	ActiveIntronRegion	0	0.38	2.70	0.00	0.00	0.00	0.93	1.66	0.46	1.12	3.45	0.00	0.44	0.00	2.14	7.20	2.44	0.93	4.68	4.36	3.11	0.41	1.80	0.00	0.00	0.00	0.00	0.00	3.20	0.00
33	ER5a	ExonRegion	0	159.03	48.89	109.73	342.01	261.15	128.85	161.88	62.42	43.30	54.95	39.96	38.84	69.80	33.63	115.03	28.76	48.39	54.79	20.98	140.59	20.16	69.72	35.47	38.43	57.37	49.81	22.12	48.21	29.61
34	E5_Da	NovelBoundary	0	3.01	0.00	1.42	0.00	0.00	3.84	0.00	0.00	0.00	3.56	0.00	1.54	0.00	3.23	8.17	2.91	14.36	4.62	0.00	10.17	4.01	0.00	0.00	8.67	1.89	1.93	0.00	2.29	1.68
35	E5a_E6a	KnownJunction	0	181.09	65.34	96.97	586.25	266.59	134.09	192.93	51.66	42.48	36.47	36.16	36.08	68.53	33.83	173.81	30.52	43.24	32.36	32.37	149.93	18.21	64.66	39.25	39.78	40.88	53.73	25.35	44.48	26.31
36	I5	Intron	0	3.84	1.44	0.00	6.41	0.00	2.46	1.80	0.00	1.01	1.94	1.60	0.00	0.00	1.01	2.06	2.22	2.00	4.45	2.86	2.47	0.64	0.00	0.00	1.92	0.00	0.70	0.00	0.00	0.00
37	I5_AR1	ActiveIntronRegion	0	3.90	1.47	0.00	6.53	0.00	2.50	1.84	0.00	1.02	1.97	1.63	0.00	0.00	1.03	2.10	2.26	2.04	4.53	2.91	2.48	0.65	0.00	0.00	1.96	0.00	0.72	0.00	0.00	0.00
38	E6_Aa	NovelBoundary	0	15.63	4.85	1.49	19.63	12.08	9.44	2.35	0.00	7.37	0.00	0.00	0.00	0.00	5.58	25.11	6.73	3.40	4.62	8.09	0.00	0.00	0.00	0.00	2.81	1.93	0.00	0.00	6.07	2.44
39	ER6a	ExonRegion	0	244.27	109.72	37.68	390.79	208.93	176.62	231.93	75.76	58.55	62.10	62.12	56.71	80.19	54.35	177.51	43.12	67.74	61.13	53.25	174.89	40.30	102.34	38.84	56.60	90.81	42.62	42.10	69.88	23.20
40	E6_Da	NovelBoundary	0	3.01	0.00	0.00	10.78	0.00	5.45	7.67	0.00	1.13	0.00	0.00	0.00	0.00	1.79	0.00	6.81	4.41	4.62	8.09	3.47	3.65	0.00	0.00	3.05	1.93	2.19	0.00	1.66	1.82
41	E6a_E7a	KnownJunction	0	208.51	140.09	23.87	137.83	120.55	181.40	220.45	82.86	65.47	64.75	48.05	52.47	64.39	54.57	162.84	19.43	34.82	60.88	113.29	200.21	68.43	70.88	43.19	69.09	59.90	41.76	35.93	64.84	13.63
42	I6	Intron	0	3.79	1.78	0.99	7.13	2.16	4.00	3.34	1.08	2.23	1.22	2.32	1.52	0.67	2.32	2.34	6.20	9.51	2.23	4.00	4.70	2.73	0.86	1.33	5.86	4.84	0.23	3.71	1.02	1.31
43	I6_AR1	ActiveIntronRegion	0	4.10	2.65	0.58	7.84	0.85	2.63	1.16	0.64	1.78	0.50	2.38	0.68	0.32	1.78	0.80	3.64	4.08	1.50	1.11	5.34	2.67	0.00	1.39	1.79	2.08	0.00	0.64	0.57	0.52
44	I6_SR1	SilentIntronRegion	0	6.34	0.67	0.00	14.41	0.00	3.05	1.05	1.36	2.34	0.00	0.43	1.65	0.08	1.12	0.00	4.69	2.54	0.99	0.00	5.83	2.38	1.33	2.10	0.34	2.80	0.00	0.00	1.20	0.74
45	I6_SR2	SilentIntronRegion	0	0.89	0.00	0.00	0.00	0.00	0.00	0.00	0.92	0.00	0.00	0.00	1.24	0.00	1.89	0.00	0.00	1.34	0.00	0.00	0.00	1.07	1.35	1.51	1.25	0.00	0.00	0.00	0.00	0.00
46	I6_AR3	ActiveIntronRegion	0	5.31	1.04	2.17	4.81	3.88	3.60	5.80	1.77	1.88	1.17	2.93	0.95	0.21	3.13	1.49	4.74	11.29	2.95	3.82	5.09	2.78	1.39	0.57	4.15	5.66	0.23	9.46	1.94	1.41
47	I6_AR4	ActiveIntronRegion	0	2.75	1.90	0.73	7.27	2.17	4.92	3.44	0.94	2.60	1.71	2.25	2.14	1.10	2.31	3.67	8.20	11.85	2.39	5.77	4.20	2.81	0.93	1.58	9.02	5.90	0.35	2.84	0.79	1.66
48	E7_Aa	NovelBoundary	0	5.13	9.11	0.00	17.26	0.00	1.96	0.00	1.89	6.91	0.00	1.27	1.27	1.43	1.37	0.00	14.46	7.50	0.00	16.18	0.00	0.00	0.00	2.07	2.51	1.78	0.00	19.98	0.00	2.91
49	ER7a	ExonRegion	0	137.53	94.82	25.00	222.65	115.14	133.23	179.53	51.58	85.50	46.65	45.22	41.98	62.10	33.63	175.06	38.02	60.95	51.15	56.43	143.18	34.79	54.02	29.37	50.98	49.25	26.35	44.36	37.18	26.30
50	E7_Da	KnownBoundary	0	4.48	0.00	0.00	0.00	12.38	3.91	2.92	0.00	1.55	0.00	0.00	0.00	0.00	0.00	8.37	3.52	3.67	0.00	0.00	8.27	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER7b	ExonRegion	0	0.73	0.51	0.00	1.17	1.33	1.09	0.72	0.15	1.46	0.23	0.09	0.00	0.00	0.64	0.56	0.53	2.05	0.32	0.76	2.42	1.05	0.02	0.29	0.34	0.23	0.00	0.00	0.00	0.32