Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AFAP1	Gene	0	18.00	49.16	30.33	3.85	3.95	23.95	3.01	1.69	15.85	33.06	12.91	16.18	6.77	53.01	2.96	27.82	31.00	75.13	13.37	5.95	30.87	12.58	42.33	40.59	51.49	36.70	38.78	7.51	19.96
2	358461	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	420658	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	360265	Transcript	0	0.01	0.01	0.19	0.00	0.00	0.18	0.44	0.00	0.00	0.02	1.79	0.02	1.30	0.04	0.00	0.31	1.19	0.16	0.01	0.00	0.89	0.27	0.03	2.16	0.75	0.21	7.33	0.37	0.02
5	382543	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	2.38	1.77	1.04	0.00	0.00	3.09	0.38	0.35	0.46	2.91	0.04	0.94	0.00	2.66	0.00	6.41	2.54	15.86	1.92	0.00	2.27	1.14	3.17	0.45	2.95	2.62	0.72	0.79	1.79
7	E1a_E2b	KnownJunction	0	8.08	9.31	2.09	0.00	0.00	8.98	0.00	0.00	0.00	9.03	1.23	4.46	0.00	16.46	0.00	30.98	6.57	55.48	8.09	0.00	10.71	5.98	6.85	6.10	10.46	5.66	0.00	3.77	4.42
8	ER2a	ExonRegion	0	0.03	0.03	0.37	0.00	0.00	0.36	0.88	0.00	0.01	0.05	0.01	0.04	0.00	0.07	0.00	0.63	1.37	0.31	0.02	0.00	0.36	0.54	0.07	0.02	0.07	0.43	0.01	0.74	0.05
9	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.90	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2b	ExonRegion	0	13.10	18.37	8.49	0.57	0.47	19.49	2.41	1.47	1.38	23.84	7.75	11.53	0.11	39.39	0.00	24.26	16.58	68.34	6.19	9.29	23.10	9.84	19.41	8.49	26.40	28.63	6.22	4.27	12.15
11	E2a_E3a	KnownJunction	0	26.43	8.63	12.01	0.00	6.34	24.21	0.00	7.02	2.92	29.24	8.54	7.74	0.00	44.69	0.00	6.73	16.09	52.01	8.09	15.30	31.33	12.45	15.56	13.46	35.65	12.53	12.03	1.93	8.91
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00
13	ER3a	ExonRegion	0	17.21	12.37	21.80	6.72	1.93	17.63	0.12	0.96	0.41	20.83	9.68	11.95	3.22	40.38	0.00	25.80	18.39	53.22	14.50	5.62	17.03	8.09	24.26	14.90	23.95	19.77	2.80	7.39	9.18
14	E3a_E4a	KnownJunction	0	10.38	30.05	31.54	0.00	0.00	26.28	0.00	0.00	0.00	14.74	7.18	16.42	0.00	40.35	0.00	13.77	22.26	69.22	8.09	4.13	21.62	3.79	17.98	8.13	38.42	20.99	3.88	7.95	1.39
15	ER4a	ExonRegion	0	21.85	30.83	22.86	0.00	0.00	21.82	2.72	2.20	1.06	31.17	10.34	8.85	2.29	55.45	0.00	14.39	22.97	76.94	14.32	4.05	30.32	8.62	30.67	14.84	34.20	24.80	16.69	6.10	6.33
16	E4a_E5a	KnownJunction	0	16.99	36.36	26.96	0.00	0.00	25.67	0.00	2.54	2.62	35.43	14.43	4.76	8.02	52.44	0.00	19.97	26.94	83.22	24.28	4.13	24.43	8.95	31.86	11.19	47.74	23.90	30.81	5.89	9.31
17	ER5a	ExonRegion	0	17.07	40.67	24.96	1.72	3.52	14.16	0.97	1.53	1.47	32.65	16.87	9.67	3.30	58.44	1.11	23.30	24.20	70.51	16.61	4.30	19.92	10.61	35.99	14.83	32.43	23.76	26.51	8.13	7.05
18	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.86	0.00	0.00	0.00
19	E5a_E6a	KnownJunction	0	19.35	58.66	31.24	0.00	0.00	7.21	0.00	0.00	1.77	35.19	19.96	19.70	1.59	58.87	0.00	49.04	25.21	102.36	0.00	0.00	22.18	8.99	38.07	20.94	37.66	28.54	53.62	6.20	11.09
20	E6_Aa	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER6a	ExonRegion	0	13.31	32.32	31.09	0.77	1.22	12.17	1.93	1.04	0.79	32.06	15.80	17.56	3.11	53.35	0.00	28.82	24.52	86.68	11.77	3.47	26.14	7.28	34.38	16.68	27.82	35.37	31.50	7.97	4.82
22	E6a_E7a	KnownJunction	0	15.75	50.41	28.15	10.78	0.00	11.24	5.38	0.00	0.00	32.52	19.90	15.12	1.59	58.38	0.00	34.50	14.59	110.84	0.00	4.13	28.08	13.22	27.38	17.11	28.45	29.48	16.25	8.31	5.35
23	ER7a	ExonRegion	0	16.28	31.04	33.12	2.36	0.83	16.47	1.05	0.06	2.08	35.72	14.32	17.61	4.19	61.32	0.00	21.14	23.44	76.62	8.86	2.75	23.34	5.56	34.71	15.04	26.01	28.49	27.11	7.47	9.87
24	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78
25	E7a_E8a	KnownJunction	0	11.80	4.56	42.41	0.00	0.00	26.13	2.80	0.00	0.00	40.42	20.66	17.23	3.31	76.09	0.00	27.69	28.38	64.60	8.09	3.47	31.05	8.41	33.98	11.60	37.47	29.40	46.57	6.78	10.53
26	ER8a	ExonRegion	0	14.53	28.16	47.55	0.00	6.14	27.51	6.47	2.22	4.74	49.83	16.71	22.75	3.49	71.55	0.00	41.23	26.81	102.38	8.72	8.88	37.35	11.94	37.69	16.47	50.34	51.19	35.56	10.64	9.51
27	E8a_E9a	KnownJunction	0	19.52	59.72	44.32	0.00	6.19	41.13	24.95	0.00	16.14	65.95	17.94	28.40	6.37	67.29	0.00	59.29	30.68	102.10	8.09	0.00	54.51	8.36	20.93	11.36	35.20	51.07	33.74	11.28	7.69
28	ER9a	ExonRegion	0	22.16	44.08	38.72	2.44	2.96	42.66	3.49	2.14	5.92	51.18	18.04	21.37	5.22	80.90	0.00	33.69	29.31	87.35	7.27	7.51	46.43	11.69	44.82	17.73	47.19	51.59	30.04	9.20	13.74
29	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	2.39	0.00	0.00
30	E9a_E10a	KnownJunction	0	17.28	45.76	29.20	0.00	0.00	27.05	2.92	2.54	10.87	35.87	9.65	21.08	7.61	58.85	0.00	18.28	35.54	94.01	8.09	3.39	37.66	12.35	29.25	0.00	30.08	42.74	54.87	5.75	6.73
31	ER10a	ExonRegion	0	17.51	37.92	35.94	0.00	3.29	25.56	0.68	1.59	6.08	33.69	10.61	19.25	4.41	62.27	1.11	26.43	32.21	85.58	12.06	4.76	31.45	7.43	37.62	14.30	31.76	38.23	25.41	8.89	7.69
32	E10a_E12a	KnownJunction	0	14.10	43.05	25.64	0.00	6.04	23.14	0.00	0.00	7.40	15.38	8.86	14.10	6.05	64.10	0.00	14.23	40.45	84.64	0.00	8.27	21.42	11.13	36.79	13.58	28.38	20.30	21.47	8.63	8.02
33	E11_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.08	0.00	0.00	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER12a	ExonRegion	0	20.79	41.89	37.70	0.00	1.13	23.18	1.41	0.00	7.62	35.08	16.44	19.24	3.68	63.74	1.61	31.63	33.02	94.83	17.14	6.51	35.89	9.38	43.66	22.41	43.56	41.47	34.08	9.68	11.65
37	E12a_E13a	KnownJunction	0	22.65	90.94	42.70	0.00	12.53	21.98	0.00	0.00	6.49	50.05	11.51	22.29	3.50	64.56	0.00	50.95	43.96	106.34	48.55	26.79	38.99	9.09	36.25	36.01	35.04	38.67	42.94	24.26	9.41
38	ER13a	ExonRegion	0	23.45	42.65	39.23	0.00	6.08	23.42	0.87	0.00	7.21	33.67	14.16	16.66	1.87	58.20	0.00	25.31	31.73	81.32	12.89	7.88	31.66	11.95	40.79	22.77	45.82	39.45	27.72	11.12	11.76
39	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E13a_E15a	KnownJunction	0	8.55	37.81	32.54	0.00	7.07	29.85	2.46	0.00	10.05	19.13	10.31	9.91	0.00	37.67	0.00	31.59	25.37	79.37	8.09	7.44	27.28	6.81	45.41	27.16	38.23	53.81	22.61	10.47	8.68
41	ER14a	ExonRegion	0	0.87	0.00	0.34	0.00	0.00	0.00	0.00	0.75	0.00	0.29	0.00	0.00	0.00	0.28	0.00	0.00	0.60	0.00	0.00	0.00	0.01	0.36	0.01	0.01	0.00	0.00	0.00	0.00	0.00
42	E14_Da	NovelBoundary	0	6.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00
43	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E15_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.84	0.00	6.72	1.43	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.14	0.00	0.00	0.00	0.00	17.19	31.28	0.00	0.00	0.00	0.00	0.00
45	ER15a	ExonRegion	0	19.09	40.68	35.09	2.42	1.43	25.20	1.28	0.45	3.03	24.22	12.01	14.36	1.94	39.78	0.00	39.35	22.13	70.55	7.67	8.75	29.47	10.60	45.40	17.73	35.77	28.11	19.33	3.59	9.73
46	E15_Da	NovelBoundary	0	0.00	0.00	0.00	8.84	0.00	5.26	0.00	0.00	3.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.39	0.00	0.00	0.00	0.00	31.03	36.25	0.00	0.00	0.00	2.02	0.00
47	E15a_E16a	KnownJunction	0	9.61	35.39	33.76	19.63	0.00	21.79	2.92	4.48	3.62	33.27	5.63	20.96	0.00	38.71	0.00	35.95	23.61	70.51	0.00	3.39	34.13	15.70	41.22	9.75	34.10	30.77	16.10	3.73	13.57
48	I15	Intron	0	0.73	0.90	0.38	12.37	0.69	11.98	0.23	1.09	2.00	13.76	0.20	0.35	0.00	0.27	0.96	0.56	0.04	6.19	0.63	0.00	0.32	0.00	116.73	32.98	0.40	0.31	0.00	0.32	0.13
49	I15_AR1	ActiveIntronRegion	0	2.12	1.21	0.09	8.62	1.60	11.98	0.00	1.38	2.22	13.93	0.26	0.68	0.00	0.00	0.00	0.48	0.00	7.66	0.00	0.00	0.00	0.00	132.08	42.44	0.31	0.00	0.00	0.89	0.00
50	I15_SR1	SilentIntronRegion	0	0.36	0.54	0.24	13.22	0.55	11.47	0.23	1.35	2.28	15.23	0.00	0.34	0.00	0.15	1.03	0.58	0.08	5.42	0.54	0.00	0.32	0.00	124.61	32.30	0.40	0.44	0.00	0.18	0.19
51	I15_AR2	ActiveIntronRegion	0	0.00	1.67	1.26	17.83	0.00	15.40	0.61	0.28	1.16	11.90	0.72	0.00	0.00	0.94	2.35	0.75	0.00	6.75	1.85	0.00	0.86	0.00	92.68	27.89	0.65	0.31	0.00	0.00	0.20
52	E16_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	7.37	5.64	0.00	0.00	0.00	5.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	112.78	36.25	1.82	0.00	0.00	0.00	0.00
53	ER16a	ExonRegion	0	19.07	30.60	32.12	2.75	3.02	29.53	0.98	4.70	2.34	37.25	12.30	12.77	1.98	50.33	0.00	22.95	23.34	85.76	14.70	4.43	28.26	15.68	103.40	33.60	30.48	36.16	14.13	6.38	11.08
54	E16_Da	NovelBoundary	0	0.00	4.75	0.00	0.00	0.00	3.64	0.00	0.00	3.14	3.56	0.00	0.00	0.00	0.00	0.00	3.52	1.22	0.00	0.00	0.00	0.00	0.00	92.00	11.31	0.00	0.00	0.00	1.84	0.00
55	E16a_E17a	KnownJunction	0	12.80	26.47	26.11	0.00	0.00	18.88	0.00	2.04	1.83	27.92	7.88	11.63	0.00	28.16	0.00	38.17	21.45	69.35	0.00	0.00	29.88	14.78	31.96	11.84	20.87	12.49	6.51	5.98	5.48
56	I16	Intron	0	1.20	0.76	2.07	19.47	1.59	10.31	0.00	6.19	3.08	17.85	0.18	0.51	0.00	0.05	0.89	1.32	0.13	9.12	1.23	0.00	0.67	0.00	214.60	29.33	0.80	0.51	0.22	0.87	0.16
57	I16_AR1	ActiveIntronRegion	0	1.20	0.76	2.08	19.49	1.59	10.32	0.00	6.20	3.08	17.87	0.18	0.51	0.00	0.05	0.90	1.32	0.13	9.13	1.23	0.00	0.67	0.00	214.85	29.37	0.80	0.51	0.22	0.87	0.16
58	E17_Aa	NovelBoundary	0	2.18	0.00	3.59	29.55	0.00	5.87	0.00	0.00	2.89	7.75	0.00	0.00	0.00	0.00	0.00	3.06	0.00	0.00	0.00	0.00	0.00	0.00	149.13	8.97	1.82	0.00	0.00	0.00	0.00
59	ER17a	ExonRegion	0	13.56	18.52	23.12	13.44	2.74	18.03	1.91	7.74	4.98	29.99	7.43	8.55	1.95	38.81	2.70	21.81	20.82	78.25	3.58	5.33	17.68	11.55	148.14	21.31	25.36	23.39	8.35	3.80	10.49
60	E17_Da	NovelBoundary	0	0.00	0.00	0.00	10.78	0.00	6.94	0.00	0.00	4.87	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	208.23	13.76	0.00	6.39	0.00	0.00	0.00
61	E17a_E18a	KnownJunction	0	16.16	7.95	21.18	0.00	0.00	23.37	2.92	2.54	5.57	27.56	3.01	4.58	7.83	49.96	0.00	13.31	33.04	64.99	8.09	0.00	18.77	7.00	41.91	8.43	32.92	38.84	6.91	2.20	15.88
62	I17_AR1	ActiveIntronRegion	0	0.96	1.15	1.05	15.42	0.44	10.60	0.00	6.44	1.16	11.91	0.00	0.28	0.00	0.69	0.83	1.56	0.53	8.58	0.86	0.00	0.51	1.45	163.21	23.52	0.77	0.85	0.00	0.44	0.00
63	E18_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
64	ER18a	ExonRegion	0	21.85	23.51	24.47	6.65	3.65	17.35	2.19	0.26	8.54	21.25	6.15	8.40	3.51	48.34	0.00	26.76	30.25	73.13	4.03	5.91	15.47	14.80	32.22	11.39	28.79	37.24	8.82	5.76	11.97
65	E18a_E19a	KnownJunction	0	56.39	21.81	42.01	0.00	7.37	30.35	0.00	0.00	7.37	26.16	17.78	13.01	0.00	60.11	0.00	41.77	46.03	141.02	16.18	8.02	23.71	17.50	39.65	8.19	40.54	38.32	2.53	0.00	6.31
66	I18_AR1	ActiveIntronRegion	0	2.18	0.00	0.00	0.00	0.00	0.53	0.47	0.03	0.00	1.12	0.00	0.00	0.00	0.70	0.00	0.00	0.77	0.74	0.00	1.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER19a	ExonRegion	0	20.76	64.28	35.29	4.90	5.17	28.47	3.97	1.79	23.46	38.40	15.16	19.51	9.47	60.69	4.46	32.43	38.07	84.49	16.55	7.00	37.32	15.41	45.36	56.91	67.40	43.76	52.61	8.75	27.48
68	ER19b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.57	0.00	2.60	0.00	0.00	0.00	1.00	0.00	0.00	0.00	1.43	0.00	0.00	4.30	1.43	0.00	14.65	0.00	0.00