Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC073043.1	Gene	0	13.07	12.83	12.47	25.65	12.15	25.01	63.32	11.23	5.87	8.07	14.56	7.35	14.21	6.69	2.79	9.70	3.10	4.33	4.68	6.75	25.46	7.55	6.10	5.79	8.62	6.91	7.43	6.22	5.26
2	416668	Transcript	0	3.54	5.99	5.55	20.57	0.00	11.19	40.08	3.93	2.04	0.63	1.19	1.14	4.04	4.06	0.00	0.92	0.05	0.00	0.00	1.16	0.84	0.00	0.00	0.12	4.19	1.43	0.00	1.41	2.47
3	420128	Transcript	0	6.34	10.07	12.85	20.15	13.57	11.85	19.10	7.57	1.30	12.32	13.31	7.52	10.37	1.56	1.07	4.50	3.18	3.27	3.48	7.79	38.80	4.63	4.80	4.86	9.45	5.45	9.59	2.06	2.11
4	420922	Transcript	0	6.39	6.84	9.54	6.23	10.10	18.71	45.69	8.88	5.25	5.24	12.17	3.93	10.36	4.62	0.26	6.14	1.69	2.52	3.89	3.27	17.46	3.23	5.70	3.14	4.17	5.23	5.08	3.50	4.54
5	IG4_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	2.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	2.01	0.00	0.36	8.96	0.00	1.73	6.24	0.00	0.11	0.00	0.73	0.20	0.75	1.32	0.00	0.00	0.16	0.00	0.00	0.00	2.53	0.00	0.00	0.35	0.00	0.00	0.00	0.26	0.00
7	ER1b	ExonRegion	0	2.99	0.67	1.40	8.91	1.05	2.47	9.21	1.58	0.84	0.56	0.44	1.54	0.38	1.19	0.39	2.98	1.07	0.69	0.03	0.97	5.12	0.27	2.18	0.46	0.30	2.78	0.22	1.17	1.05
8	E1_Ac	KnownBoundary	0	2.95	4.07	3.04	16.39	0.00	4.68	32.38	3.88	1.16	1.52	5.38	1.54	0.00	3.04	8.37	7.04	2.41	0.00	0.00	0.00	16.57	2.09	8.96	2.51	0.00	1.97	4.57	13.48	8.48
9	ER1c	ExonRegion	0	14.65	7.29	29.63	66.13	19.62	22.31	73.13	8.62	7.77	8.65	21.12	9.28	17.59	6.24	3.59	18.96	3.43	8.86	7.07	6.21	18.88	17.25	5.96	4.94	8.70	8.74	10.92	9.78	7.95
10	E1_Da	NovelBoundary	0	0.00	0.00	4.96	0.00	12.08	9.75	12.07	0.00	0.00	3.64	1.33	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	4.43	5.62	1.78	0.00	0.00	0.00	2.71
11	E1a_E2a	KnownJunction	0	0.00	0.00	5.61	10.78	25.05	0.00	11.10	0.00	1.55	0.00	0.00	2.95	8.34	2.26	0.00	0.00	0.00	0.00	0.00	0.00	8.02	0.00	2.27	0.00	3.56	5.71	0.00	0.00	1.52
12	E1b_E2a	KnownJunction	0	3.01	0.00	8.37	20.92	5.89	4.72	16.54	2.14	2.38	0.00	1.61	1.23	0.00	2.81	0.00	0.00	0.00	4.62	0.00	4.13	7.42	6.61	2.51	0.00	1.70	1.93	0.00	2.16	3.40
13	ER1d	ExonRegion	0	2.14	0.00	7.50	14.63	8.13	6.01	17.82	0.00	0.95	2.20	2.76	1.11	0.82	2.48	0.00	0.00	0.00	1.01	0.00	3.11	6.31	4.08	4.47	3.62	0.08	1.65	0.19	1.63	2.83
14	ER2a	ExonRegion	0	36.90	34.01	17.80	50.29	29.36	92.29	202.43	31.21	14.50	25.72	48.21	18.25	32.89	17.45	10.74	30.72	6.88	12.68	15.65	21.36	74.94	22.64	11.92	18.97	24.17	16.86	22.70	18.97	22.21
15	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E2a_E3b	KnownJunction	0	45.01	67.67	25.66	39.26	13.56	132.87	390.43	54.34	39.92	51.85	85.95	31.66	81.74	29.29	0.00	78.11	19.11	19.26	32.37	42.26	105.81	15.12	27.09	27.04	37.96	45.83	54.12	32.84	24.73
17	ER3a	ExonRegion	0	25.72	26.28	12.90	21.94	14.94	70.11	181.42	24.85	19.10	21.66	44.03	17.32	38.97	16.78	0.00	27.84	8.01	6.82	11.31	16.86	47.78	8.11	17.18	12.91	18.58	22.00	28.39	17.93	13.42
18	ER3b	ExonRegion	0	49.77	54.29	51.58	52.65	59.46	96.57	212.04	38.66	28.79	27.99	70.81	23.08	53.44	29.37	13.56	29.89	10.65	13.07	24.96	33.55	87.02	23.21	29.54	27.49	42.02	23.79	40.33	25.65	16.64
19	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E3a_E4a	KnownJunction	0	2.77	9.02	24.57	0.00	12.97	23.60	42.80	19.86	7.03	3.52	18.76	1.36	6.91	3.26	0.00	3.82	1.28	4.62	8.09	0.00	29.96	2.48	9.06	2.51	0.00	1.63	0.00	1.93	6.67
21	E3a_E5a	KnownJunction	0	10.97	19.00	27.51	51.98	28.30	23.25	39.19	12.99	0.00	28.12	26.32	9.04	14.17	2.26	0.00	3.06	6.66	4.62	8.09	16.21	66.18	1.99	9.31	8.25	23.03	10.94	26.34	4.31	2.05
22	E3a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	5.32	0.00	0.00	0.00	3.07	0.00	2.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.47	2.29	0.00	0.00	1.55	0.00	0.00	1.93	0.00
23	E3a_E7a	KnownJunction	0	8.61	16.87	14.43	40.55	0.00	30.00	102.59	11.79	6.00	1.88	2.85	3.22	11.37	10.41	0.00	2.75	0.00	0.00	0.00	3.47	0.00	0.00	0.00	0.00	12.58	4.29	0.00	3.95	7.40
24	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	7.07	5.73	10.36	4.64	7.62	16.94	32.98	8.54	3.80	6.26	10.24	1.96	7.96	3.36	1.54	5.18	0.82	3.67	3.93	2.77	18.99	8.79	5.68	3.43	2.86	2.01	2.08	1.15	5.62
26	E4_Da	NovelBoundary	0	10.79	4.75	3.79	18.55	0.00	13.85	10.18	9.06	13.46	9.07	9.30	1.54	6.53	0.91	0.00	0.00	1.85	9.25	8.09	0.00	22.42	2.14	2.22	8.79	0.00	0.00	0.00	1.84	8.12
27	E4a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.93	0.00	0.00	0.00	0.00	4.38	7.16	0.00	1.25
28	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E4a_E7a	KnownJunction	0	2.77	0.00	3.81	0.00	0.00	1.61	5.84	0.00	0.00	0.00	0.00	0.00	0.00	2.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
31	ER5a	ExonRegion	0	13.36	19.09	20.90	28.62	25.98	20.84	31.42	15.96	4.38	19.79	22.62	11.12	21.53	3.77	4.28	12.72	5.69	7.07	4.28	14.46	55.53	12.09	8.57	6.53	14.75	10.10	10.66	3.91	5.29
32	E5_Da	NovelBoundary	0	8.14	9.60	24.42	28.47	21.81	41.40	42.22	14.53	1.25	25.01	16.89	9.88	22.58	1.97	17.54	17.06	3.78	0.00	0.00	7.77	58.40	9.77	7.14	11.48	29.40	29.10	2.53	4.18	9.28
33	E5a_E6a	KnownJunction	0	0.00	0.00	1.02	0.00	0.00	0.00	2.29	0.00	0.00	0.00	1.61	6.84	1.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.37	1.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	I5_AR1	ActiveIntronRegion	0	4.68	8.56	14.78	13.36	20.81	12.24	14.71	10.85	2.38	7.14	8.49	3.19	7.65	1.79	8.11	6.11	1.12	2.69	1.49	6.35	18.31	8.54	6.21	3.20	9.95	3.29	2.57	2.28	4.30
35	I5_SR1	SilentIntronRegion	0	18.69	25.62	25.83	32.46	47.99	23.90	45.70	33.50	21.21	22.44	25.09	12.25	35.38	6.38	11.20	19.02	3.73	2.95	6.68	12.29	52.35	25.94	12.75	17.52	21.54	12.92	11.12	7.76	14.18
36	I5_AR2	ActiveIntronRegion	0	10.28	15.12	14.30	18.40	28.61	21.06	32.85	14.91	11.15	14.16	22.39	8.90	27.74	3.62	14.09	9.07	3.40	3.68	7.75	8.92	36.09	10.30	7.22	10.26	12.21	6.35	6.38	4.95	5.91
37	E6_Aa	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER6a	ExonRegion	0	1.05	2.21	1.98	0.00	0.00	3.29	3.48	1.35	0.81	1.38	2.69	3.11	4.57	0.22	0.00	2.21	0.36	1.38	1.53	0.48	17.12	2.44	1.30	4.64	0.01	0.75	1.34	0.00	1.12
39	E6_Da	NovelBoundary	0	5.13	8.92	0.00	0.00	0.00	1.80	7.90	2.54	1.46	4.07	2.47	5.90	1.62	0.00	0.00	3.67	0.00	0.00	0.00	7.61	17.89	0.00	1.82	0.00	0.00	3.91	1.94	0.00	1.55
40	I6	Intron	0	0.49	1.35	0.74	0.67	1.14	1.41	0.57	0.16	1.82	1.01	1.61	0.59	0.71	0.49	0.96	1.51	0.60	0.49	0.65	0.53	8.01	0.17	0.59	1.04	0.50	0.34	0.53	0.29	0.34
41	I6_SR1	SilentIntronRegion	0	0.00	15.47	0.00	0.00	4.15	0.00	0.00	1.53	0.00	1.44	0.40	0.10	0.00	0.00	2.33	0.74	0.00	0.68	0.00	0.00	11.77	0.00	1.58	1.70	0.00	0.00	0.00	0.00	0.67
42	I6_AR1	ActiveIntronRegion	0	0.00	4.64	0.51	0.00	1.94	3.58	2.47	1.58	3.64	2.17	5.81	2.07	2.67	0.28	3.77	2.49	0.23	1.00	1.32	1.76	16.68	0.55	2.42	2.93	0.66	0.48	0.18	0.00	1.69
43	I6_SR2	SilentIntronRegion	0	0.24	1.09	0.75	0.00	0.00	1.57	0.23	0.41	1.47	0.86	1.27	0.65	0.48	0.46	0.00	0.88	0.59	1.06	1.31	0.73	8.52	0.51	0.30	1.42	0.95	0.18	0.24	0.00	0.45
44	I6_AR2	ActiveIntronRegion	0	0.64	1.57	0.54	0.00	0.00	2.25	0.20	0.00	2.13	1.04	1.39	0.71	1.26	0.35	0.45	0.90	0.46	0.00	1.87	0.54	8.89	0.35	0.34	0.21	0.61	0.61	0.76	0.32	0.20
45	I6_SR3	SilentIntronRegion	0	0.61	0.88	0.88	1.01	1.13	1.47	0.49	0.28	1.04	1.00	1.22	0.68	0.63	0.27	1.04	1.07	0.51	0.33	0.49	0.25	7.19	0.26	0.71	1.13	0.36	0.18	0.72	0.44	0.23
46	I6_AR3	ActiveIntronRegion	0	0.38	0.00	0.53	1.26	0.00	1.28	0.71	0.00	1.38	0.68	0.42	0.75	0.46	0.63	0.00	0.00	0.00	0.00	0.56	0.48	11.75	0.00	0.18	0.00	0.33	0.83	0.00	1.03	0.21
47	I6_SR4	SilentIntronRegion	0	0.54	0.81	0.21	2.70	0.00	0.94	0.51	0.00	1.70	0.42	1.05	0.24	0.49	0.11	0.00	0.31	0.00	0.24	0.00	0.94	10.71	0.00	0.45	0.27	0.13	0.79	0.00	0.90	0.53
48	I6_AR4	ActiveIntronRegion	0	0.00	0.00	0.34	0.00	0.00	0.35	0.81	0.00	0.64	1.14	0.78	0.37	0.00	0.22	0.00	0.52	0.30	0.00	0.00	0.56	4.66	0.36	0.36	0.83	0.00	0.95	0.00	0.00	0.72
49	I6_SR5	SilentIntronRegion	0	0.62	0.93	0.88	0.67	1.06	1.09	0.64	0.08	1.04	0.88	2.00	0.50	0.60	0.61	0.81	1.45	0.65	0.50	0.40	0.63	8.82	0.13	0.62	0.31	0.41	0.24	0.43	0.34	0.25
50	I6_AR5	ActiveIntronRegion	0	0.46	2.80	0.89	0.76	2.16	2.28	0.74	0.08	3.94	1.58	2.17	0.67	0.86	0.81	1.85	3.25	1.02	0.86	1.22	0.69	9.82	0.05	0.66	2.16	0.87	0.67	0.70	0.17	0.53
51	I6_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.88	0.00	0.00	0.00	0.53	0.00	3.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	I6_AR1	ActiveIntronRegion	0	0.00	1.37	0.21	0.89	0.00	0.51	0.25	0.00	0.80	0.36	0.44	0.15	0.00	0.00	0.00	2.08	0.19	0.00	0.28	0.00	2.65	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00
53	I6_AR2	ActiveIntronRegion	0	0.34	1.02	0.53	0.00	1.93	0.33	0.00	1.31	2.66	0.46	0.75	0.98	1.23	0.00	0.00	1.46	0.35	0.61	0.51	0.00	2.82	0.14	0.57	0.85	0.23	0.12	0.00	0.64	0.42
54	I6_AR3	ActiveIntronRegion	0	0.00	0.00	0.73	0.00	0.00	1.03	0.00	0.00	1.70	0.79	0.70	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.38	0.00	0.00	0.00	1.07	0.00	0.00	0.74	0.00
55	E7_Aa	NovelBoundary	0	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
56	ER7a	ExonRegion	0	13.69	13.77	6.16	37.07	0.87	22.07	92.75	11.56	5.38	0.43	0.50	7.06	13.14	9.36	0.10	4.50	2.90	1.03	0.57	0.11	0.00	0.33	2.59	0.77	5.82	6.48	1.97	7.52	0.83
57	ER7b	ExonRegion	0	0.00	1.09	1.87	12.19	0.00	1.83	11.42	0.00	0.00	0.00	0.00	0.00	0.00	0.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	IG3_AR16	ActiveIntergenicRegion	0	0.00	6.57	0.00	0.00	0.00	0.00	0.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00
59	IG3_SR2	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	0.00	0.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.18	0.00	0.00	0.00	0.00	0.00