Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	HSPE1	Gene	0	607.80	775.08	199.42	856.50	518.33	569.18	1900.60	1206.09	863.26	485.88	387.08	511.43	1329.64	254.71	897.89	453.06	228.63	292.84	1701.24	431.66	860.45	596.48	664.12	296.23	475.37	580.75	675.17	653.09	829.75
2	233893	Transcript	1	29.01	81.28	9.01	179.47	27.96	41.82	92.66	18.55	88.64	16.21	22.64	25.18	62.13	15.67	121.24	29.21	14.61	24.49	306.41	63.95	37.74	29.05	21.70	23.46	12.83	9.52	7.21	12.47	34.26
3	409729	Transcript	0	2.60	11.15	1.54	0.00	12.23	6.48	19.85	2.54	5.79	0.00	7.31	8.46	4.01	0.91	17.34	6.58	4.50	0.00	32.37	10.09	6.26	4.42	0.00	13.22	1.67	2.19	4.17	5.44	5.15
4	473395	Transcript	0	69.14	16.15	4.26	11.35	16.00	18.03	6.73	5.95	14.18	7.53	4.94	4.64	0.94	7.91	21.13	17.38	13.01	38.57	39.00	9.07	20.20	0.67	3.61	10.03	8.52	1.68	0.60	7.35	1.14
5	409468	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	495200	Transcript	0	12.12	3.00	0.41	5.28	0.50	26.41	20.43	4.63	2.90	4.61	3.43	5.45	1.91	2.22	5.13	11.96	0.93	1.14	6.90	1.57	9.95	1.23	5.05	3.41	6.94	2.02	15.38	14.57	2.61
7	465573	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	463841	Transcript	0	132.69	42.32	15.76	65.67	30.98	52.40	169.41	83.33	49.18	40.01	26.87	35.23	70.52	30.33	46.49	50.26	24.79	44.51	157.30	33.51	80.22	34.54	45.00	30.94	31.93	50.54	36.01	57.97	46.49
9	ER1a	ExonRegion	0	0.74	0.34	7.19	13.88	16.67	0.59	5.01	0.68	0.47	0.87	0.17	0.58	1.11	0.51	0.23	1.15	2.64	2.58	0.92	0.36	0.42	1.77	1.40	0.28	1.19	2.97	0.42	3.96	5.40
10	E1_Ab	KnownBoundary	0	15.04	0.00	13.53	53.92	69.71	22.14	14.07	11.99	5.97	13.98	12.40	3.16	3.41	7.62	6.98	29.99	5.51	32.36	24.28	11.16	12.23	59.80	11.52	3.05	11.18	70.34	26.79	22.92	20.80
11	ER1b	ExonRegion	0	64.56	28.13	60.53	221.72	305.88	27.82	136.14	43.90	18.65	30.17	12.85	23.16	54.12	15.32	37.36	49.69	26.82	58.96	69.42	36.36	56.78	63.10	81.93	22.62	20.50	50.15	30.10	44.36	111.00
12	E1_Ac	KnownBoundary	0	126.52	50.22	51.65	162.42	250.68	61.20	369.44	151.29	50.67	75.70	17.40	17.86	92.00	26.06	105.84	137.70	16.95	145.00	185.68	73.85	123.54	119.31	252.16	39.24	31.94	74.33	27.48	63.80	107.76
13	E1_Ad	KnownBoundary	0	1096.13	868.87	210.56	1254.68	1316.76	758.87	2622.55	2015.82	713.14	633.62	322.45	442.70	1853.02	212.37	1061.38	693.84	227.46	568.69	2418.30	404.81	1162.04	1357.35	1641.34	227.36	435.60	607.96	846.30	1309.66	926.23
14	ER1c	ExonRegion	0	601.17	447.08	167.26	737.85	825.28	388.71	1414.92	1030.45	358.59	365.95	209.97	259.33	1059.56	129.50	482.59	401.20	145.88	295.66	1121.95	243.59	609.87	752.70	959.82	153.52	247.23	344.50	457.52	651.09	577.27
15	ER1d	ExonRegion	0	3358.86	3894.79	1026.18	7394.58	3812.49	2484.43	9209.79	6414.11	2359.35	2399.30	2723.71	2893.77	8063.59	1145.43	4130.40	3265.93	895.51	1976.47	10148.98	1858.95	3991.78	3805.28	5236.26	1216.89	2495.15	3640.35	5809.59	4085.02	4810.97
16	E1_Ae	NovelBoundary	0	21.12	0.00	2.64	0.00	5.60	1.88	0.00	0.00	0.00	5.03	0.00	0.00	0.00	1.02	0.00	9.41	3.22	4.62	0.00	0.00	0.00	1.94	0.00	2.87	3.41	6.09	0.00	1.84	0.00
17	E1_Da	NovelBoundary	0	6.02	0.00	0.00	0.00	0.00	6.52	0.00	2.24	0.00	5.67	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	3.69	0.00	0.00	2.69	3.49	1.76	0.00	4.09	0.00
18	E1a_E1h	KnownJunction	0	3807.33	4743.88	1923.13	8567.08	3037.47	3392.50	20083.59	8797.07	3504.63	3167.48	2690.46	4423.44	10345.43	1670.67	5030.03	4172.47	1595.01	2324.07	14541.04	2301.27	5095.78	4073.89	5511.93	1660.90	3067.98	6003.82	4994.00	5948.52	6404.62
19	E1a_E2a	KnownJunction	0	2.60	11.15	1.54	0.00	12.23	6.48	19.85	2.54	5.79	0.00	7.31	8.46	4.01	0.91	17.34	6.58	4.50	0.00	32.37	10.09	6.26	4.42	0.00	13.22	1.67	2.19	4.17	5.44	5.15
20	ER1e	ExonRegion	0	3993.29	5331.41	2035.44	9396.76	3875.64	3985.18	21189.56	10468.38	4749.12	3756.69	2930.05	4478.76	10310.27	1725.20	5779.83	4256.69	1738.99	2284.31	14256.36	2762.89	6498.61	4414.91	6135.43	1619.81	3519.02	6596.13	5236.35	6974.94	6489.39
21	ER1f	ExonRegion	0	11.32	1.55	0.82	0.00	1.01	1.98	0.99	0.90	0.80	0.24	0.86	0.00	0.64	0.19	2.69	1.51	0.00	2.28	5.70	0.00	4.14	0.61	0.00	1.61	2.10	0.77	0.00	0.66	0.66
22	E1_Af	KnownBoundary	0	30.38	0.00	0.00	0.00	7.37	0.00	0.00	0.00	1.55	1.88	2.66	0.00	0.00	1.04	0.00	3.21	0.00	14.64	16.18	0.00	1.60	2.33	0.00	3.05	0.00	0.00	0.00	1.84	0.00
23	ER1g	ExonRegion	0	72.55	5.66	8.28	12.04	18.74	28.04	24.96	7.27	9.56	9.58	6.40	8.86	2.03	6.85	11.76	17.63	7.27	26.40	38.38	12.64	24.90	4.15	5.82	10.04	11.34	5.21	15.60	15.72	4.71
24	E1_Ag	KnownBoundary	0	78.21	12.60	6.93	20.92	0.00	94.77	69.17	11.15	25.79	18.14	9.24	15.78	2.74	19.19	7.97	42.07	15.46	28.25	56.65	32.67	85.44	3.89	6.45	14.18	14.78	14.63	7.55	32.26	5.84
25	ER1h	ExonRegion	0	88.95	12.14	3.15	15.23	1.80	96.91	94.74	23.78	28.90	21.90	12.40	16.70	8.70	18.70	16.65	46.96	10.94	29.95	63.86	31.07	81.46	7.51	14.67	18.46	19.26	16.41	27.78	41.25	9.47
26	E1_Db	KnownBoundary	0	120.86	4.75	1.27	0.00	0.00	16.54	8.75	1.99	8.80	7.87	2.91	4.97	1.53	15.97	9.97	10.33	9.90	23.12	48.55	14.56	20.42	2.48	0.00	18.96	11.74	6.52	7.01	2.29	0.00
27	E1b_E1h	KnownJunction	0	12.92	4.46	0.00	10.57	0.00	50.84	39.88	8.36	4.99	8.99	6.01	10.90	3.18	4.25	7.57	22.41	1.87	0.00	8.09	3.14	15.76	1.85	10.10	5.20	11.78	3.26	30.76	28.49	4.56
28	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER1i	ExonRegion	0	132.69	42.32	15.76	65.67	30.98	52.40	169.41	83.33	49.18	40.01	26.87	35.23	70.52	30.33	46.49	50.26	24.79	44.51	157.30	33.51	80.22	34.54	45.00	30.94	31.93	50.54	36.01	57.97	46.49
30	E1_Ah	KnownBoundary	0	105.35	4.85	0.00	17.90	6.93	10.44	10.24	7.02	4.39	16.82	5.47	5.93	6.21	18.61	0.00	33.58	8.46	70.12	72.83	20.34	22.86	7.20	4.24	29.67	2.92	0.00	5.76	4.00	3.07
31	ER1j	ExonRegion	0	2634.52	3293.27	1649.22	4804.15	2230.37	3612.44	15991.49	8409.25	5818.42	3127.89	1483.09	2994.00	6363.65	1194.40	3604.04	2226.58	1463.17	1213.93	7266.01	1661.92	6300.19	2619.35	3518.51	1168.35	2361.08	4307.72	2298.94	4757.34	4450.56
32	E1_Dc	KnownBoundary	0	1065.69	1081.97	862.73	701.86	532.16	733.55	1484.21	2518.65	3314.57	419.63	363.51	1243.14	2438.74	540.42	966.10	390.83	880.25	329.30	2192.61	673.09	1113.30	1041.82	433.15	684.71	614.04	278.94	426.70	264.15	1903.72
33	ER1k	ExonRegion	0	3721.07	3540.92	307.83	785.74	622.42	2197.51	3944.30	7544.87	3492.43	1211.32	897.41	1354.01	5735.20	1185.31	3344.70	1756.88	718.47	1095.12	5726.42	2173.94	3186.52	4187.47	1580.35	1617.56	2200.62	1172.54	582.31	914.78	2659.60
34	E1_Dd	KnownBoundary	0	94.26	12.60	1.54	9.92	20.19	23.40	0.00	2.49	13.73	12.74	1.58	8.16	0.00	11.39	18.34	17.21	14.68	89.00	72.83	14.47	28.68	0.00	10.05	8.08	10.42	1.80	0.00	5.21	4.69
35	E1d_E2a	KnownJunction	0	4753.76	6785.46	102.50	424.48	397.61	4692.12	10727.20	14347.65	8209.63	3317.52	2559.81	3838.75	12191.16	1994.40	7844.62	5017.09	1802.47	2699.47	15345.11	3631.24	6737.18	4121.68	3878.91	2295.36	5199.55	3386.31	1438.89	2349.92	7273.67
36	E1d_E2b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	2.97
37	ER1l	ExonRegion	0	69.14	16.15	4.26	11.35	16.00	18.03	6.73	5.95	14.18	7.53	4.94	4.64	0.94	7.91	21.13	17.38	13.01	38.57	39.00	9.07	20.20	0.67	3.61	10.03	8.52	1.68	0.60	7.35	1.14
38	E1_De	NovelBoundary	1	333.27	146.88	189.88	170.18	122.47	209.60	183.95	261.87	412.72	334.98	146.40	238.82	201.89	201.58	328.08	196.53	473.89	33.78	23.83	105.61	345.71	146.58	144.79	143.32	200.56	413.86	152.32	444.82	157.94
39	E1e_E2a	NovelJunction	0	3.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.12	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	4.30	0.00	2.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	Ix	Intron	0	56.18	11.59	2.74	10.15	13.27	18.20	6.05	3.96	14.08	7.60	1.75	5.34	0.66	7.09	18.16	16.01	9.13	23.57	45.21	8.19	19.22	1.73	1.02	11.81	4.53	0.89	0.31	6.18	2.46
41	Ix_SR1	SilentIntronRegion	0	43.39	9.63	2.36	4.29	2.92	8.49	5.14	5.02	8.02	6.57	0.90	3.24	0.00	2.81	6.18	8.46	1.11	28.04	21.07	3.59	1.38	1.86	0.00	6.31	4.88	1.95	0.00	0.84	1.57
42	Ix_AR2	ActiveIntronRegion	0	56.67	11.67	2.76	10.36	13.63	18.55	6.08	3.93	14.30	7.64	1.78	5.41	0.68	7.24	18.58	16.28	9.40	23.45	46.06	8.35	19.83	1.73	1.06	12.01	4.52	0.86	0.32	6.37	2.49
43	E2_Aa	NovelBoundary	0	46.60	7.85	0.00	10.78	0.00	29.73	16.02	2.54	8.59	5.63	3.23	2.92	5.70	15.47	43.65	3.67	17.89	18.49	64.74	8.19	40.63	0.00	0.00	25.72	1.86	0.00	1.89	6.87	2.05
44	ER2a	ExonRegion	0	2234.21	4318.60	232.36	1023.77	1085.59	3697.72	16887.77	5376.49	6845.47	4310.77	3513.66	4351.77	9237.44	1530.68	6560.12	2797.44	1757.41	1651.84	11553.94	2079.65	5660.02	1930.93	5310.18	1448.22	3541.27	5442.34	6791.39	6218.20	7157.39
45	E2_Da	KnownBoundary	0	75.44	29.09	1.35	0.00	12.53	25.94	11.39	14.33	18.82	15.50	13.22	11.54	8.60	23.84	68.37	25.70	28.09	32.36	145.44	15.05	36.30	0.00	0.00	13.40	1.93	0.00	7.95	2.29	9.64
46	E2a_E2b	KnownJunction	0	1213.57	2952.53	547.46	1728.13	2021.94	1574.18	2386.14	1748.97	2957.73	658.38	917.05	1439.43	3284.36	743.40	3612.07	666.61	888.31	532.47	3341.06	1739.58	1999.46	1110.57	1444.99	1046.17	715.76	573.38	4598.76	1378.59	1624.69
47	ER2b	ExonRegion	0	79.07	61.97	7.91	30.70	30.38	51.17	34.91	36.78	42.85	14.19	17.13	23.93	48.14	31.16	79.24	29.31	27.81	31.23	144.38	44.73	72.90	16.56	18.77	37.95	12.83	8.63	60.35	21.51	23.83
48	E2_Ab	KnownBoundary	0	49.96	35.87	1.10	0.00	0.00	20.41	4.81	9.46	17.02	5.07	3.04	5.39	8.15	9.33	18.14	42.38	13.84	23.63	145.44	36.14	43.60	2.09	0.00	40.97	3.52	0.00	1.99	0.00	1.91
49	ER2c	ExonRegion	0	1026.90	1960.11	1459.08	3407.53	2426.41	1103.66	1534.91	1378.80	1482.13	587.13	589.12	758.04	2069.33	640.91	2311.51	620.32	433.30	485.57	3337.72	1322.63	1295.13	1051.76	751.55	815.78	537.38	284.10	1302.16	591.55	848.30
50	E2_Db	KnownBoundary	0	903.30	1262.29	1287.70	4240.29	2444.16	860.62	1519.45	992.88	1010.57	505.03	566.07	598.09	1492.00	477.76	1911.87	515.14	247.35	526.31	2709.63	1070.21	980.86	765.63	545.49	649.90	408.74	246.11	438.33	286.93	683.81
51	ER2d	ExonRegion	0	525.91	1408.65	382.61	4587.70	2151.56	618.04	1189.01	500.10	808.17	452.33	381.16	434.60	1023.18	276.89	1238.39	336.41	203.34	306.41	2783.33	805.44	829.43	417.05	321.13	494.49	312.99	158.22	402.12	231.60	466.43
52	E2_Dc	KnownBoundary	0	26.66	25.30	5.31	88.43	55.12	41.48	66.14	40.61	70.28	8.23	18.54	22.05	60.98	7.49	41.86	20.35	6.73	0.00	8.09	62.85	33.81	20.47	6.16	27.87	9.36	4.85	2.14	7.41	29.68
53	E2_Dd	KnownBoundary	1	38.81	57.78	10.74	68.59	17.68	45.66	113.97	10.30	157.38	3.28	19.27	24.43	101.14	23.55	65.18	16.06	31.83	0.00	24.28	31.67	52.79	28.44	15.71	20.22	6.10	1.72	0.00	3.95	72.13
54	ER2e	ExonRegion	0	182.20	479.60	56.10	1886.67	821.96	197.95	465.64	108.62	365.14	115.50	133.29	155.85	361.13	82.54	436.85	103.76	77.13	95.52	1145.03	264.20	268.16	138.81	72.33	161.34	114.35	58.15	91.58	81.50	190.59
55	ER2f	ExonRegion	1	57.27	162.23	10.83	345.06	39.25	83.05	180.32	36.43	176.80	31.55	45.11	49.79	123.15	30.84	242.25	57.26	26.59	46.40	611.89	127.53	75.07	56.34	42.00	46.64	24.47	16.07	13.99	20.97	63.12