Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C2orf49	Gene	0	98.20	55.15	36.89	153.21	104.12	88.78	136.34	90.89	45.43	61.46	56.83	49.90	44.49	42.81	93.24	77.20	81.14	44.55	87.00	76.96	132.75	28.94	30.29	60.60	48.77	26.38	34.99	32.97	30.26
2	258457	Transcript	0	128.48	43.87	25.08	117.25	80.06	81.79	140.87	90.44	35.99	64.98	55.62	33.69	51.91	35.04	63.14	64.51	56.87	43.68	75.42	66.54	114.89	44.38	42.69	40.89	64.19	30.04	55.95	28.32	23.07
3	437250	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	410049	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	IG46	Intergenic	0	4.65	4.68	2.48	11.02	9.32	3.13	2.32	3.26	5.21	2.34	1.54	3.45	1.21	3.03	5.09	6.18	4.32	2.28	5.31	1.38	3.15	0.57	0.37	1.83	2.71	0.71	3.07	1.52	1.41
6	IG46_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.47	6.09	1.38	1.17	0.57	0.00	1.43	1.64	0.34	1.05	0.00	0.77	1.31	1.21	0.42	1.64	4.53	0.78	3.64	0.00	0.00	1.22	2.02	1.78	0.00	0.46	0.57
7	IG46_AR3	ActiveIntergenicRegion	0	9.37	8.06	4.34	21.16	15.97	6.02	4.27	6.18	8.83	4.30	3.09	6.69	2.12	5.48	8.01	11.58	7.65	4.65	8.57	2.70	5.30	0.70	0.81	3.08	4.70	0.81	4.64	2.92	2.03
8	ER1a	ExonRegion	0	14.23	1.16	11.64	61.72	22.80	6.42	2.66	6.35	0.49	5.31	4.59	3.31	4.96	4.57	2.03	18.13	12.79	0.85	4.84	0.87	1.25	0.79	0.00	2.76	3.77	1.33	1.55	7.26	4.11
9	E1_Ab	KnownBoundary	0	5.78	3.97	10.09	79.59	7.37	1.46	0.00	0.00	0.00	2.00	6.26	1.39	3.95	0.00	0.00	2.83	1.17	0.00	8.09	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	4.58	3.40
10	ER1b	ExonRegion	0	2.07	0.51	3.15	15.26	1.98	0.45	0.28	0.25	0.02	0.82	1.23	0.43	1.41	0.02	0.00	0.83	2.45	0.85	1.56	0.00	1.18	0.00	0.00	0.15	0.05	0.11	0.13	1.43	1.43
11	E1_Ac	KnownBoundary	0	2.36	0.00	0.00	0.00	0.00	0.00	2.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.43	4.62	0.00	0.00	3.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.32
12	ER1c	ExonRegion	0	123.33	36.35	65.58	417.06	208.97	63.00	123.68	98.01	35.32	41.16	23.12	63.18	97.37	33.11	91.90	78.04	115.04	72.80	59.98	66.84	62.71	54.68	52.60	19.44	42.43	56.30	45.02	70.13	63.48
13	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00
14	E1a_E2a	KnownJunction	0	69.43	22.59	20.80	121.87	60.27	32.88	65.85	44.49	6.27	14.46	20.56	17.65	23.88	18.92	71.95	17.21	23.32	27.74	24.05	52.10	16.04	34.76	10.05	22.73	24.78	7.30	11.23	24.53	16.04
15	E2_Aa	NovelBoundary	0	2.48	0.00	0.00	18.55	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
16	ER2a	ExonRegion	0	374.08	120.56	28.73	122.61	103.12	223.05	323.32	275.53	93.28	164.46	122.71	99.94	163.21	100.98	230.26	152.09	147.96	137.75	155.96	236.25	277.49	128.15	106.43	115.57	172.26	119.43	130.30	147.63	112.44
17	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.91	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E3a	KnownJunction	0	410.95	123.32	60.19	259.91	239.92	319.30	391.41	179.41	105.82	161.06	223.31	141.53	187.91	128.55	229.02	152.08	226.83	119.57	178.03	268.44	313.62	103.17	163.26	159.23	136.46	139.60	410.40	247.35	108.15
19	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00
20	E3_Aa	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	1.84	0.00	0.00	2.80	0.00	0.00	0.00	0.00	3.12	0.00	0.00	3.33	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER3a	ExonRegion	0	415.90	171.80	206.53	573.15	434.10	218.78	337.95	244.94	112.79	164.97	155.15	108.36	167.94	126.41	229.58	161.63	188.05	119.25	224.40	303.49	247.82	142.46	116.01	153.49	200.92	91.69	206.27	147.38	92.86
22	E3_Da	KnownBoundary	0	369.90	125.26	146.65	350.72	281.77	177.64	201.11	286.75	96.26	122.83	82.50	87.11	116.87	80.16	131.15	111.92	155.22	85.41	89.02	152.83	261.96	114.01	97.96	100.43	123.88	81.67	104.02	59.49	49.03
23	E3a_E3b	KnownJunction	0	108.53	79.50	27.43	142.57	81.05	40.55	40.74	100.08	21.93	25.65	24.58	16.20	46.68	46.13	68.37	58.52	20.82	28.25	72.61	120.49	59.28	54.26	13.25	83.86	43.34	21.67	23.90	33.43	16.04
24	E3a_E4a	NovelJunction	0	0.00	0.00	0.00	10.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3b	ExonRegion	0	369.74	130.13	63.40	290.03	214.48	237.89	417.99	263.71	105.79	188.08	160.69	97.76	150.43	100.12	185.35	174.46	156.79	128.42	220.70	196.46	341.82	131.53	126.96	116.99	188.47	88.07	165.69	77.70	64.88
26	E3_Ab	KnownBoundary	0	369.25	59.04	78.93	165.65	165.35	117.67	181.66	283.67	123.09	136.57	139.70	72.74	138.46	102.59	161.85	162.79	137.04	103.00	145.66	142.90	241.91	184.45	79.59	131.06	175.22	59.52	44.88	44.35	44.04
27	ER3c	ExonRegion	0	353.04	112.04	124.56	322.06	205.10	172.63	330.72	337.64	83.84	144.46	148.28	96.88	137.83	113.14	210.76	153.05	157.05	124.80	180.07	202.41	257.10	161.06	118.23	133.42	166.15	102.68	128.85	119.34	68.01
28	E3_Db	NovelBoundary	0	5.54	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	1.11	0.00	2.44	9.17	0.00	0.00	4.62	0.00	0.00	1.68	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
29	E3b_E4a	KnownJunction	0	380.63	94.62	193.94	525.43	344.11	259.29	663.12	432.12	118.61	223.30	169.66	82.50	146.42	133.14	245.56	251.37	203.35	186.48	299.20	208.82	327.34	221.60	191.73	132.85	220.11	125.22	148.74	211.94	93.13
30	E4_Aa	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	5.79	0.00	0.00	3.32	3.60	0.00	0.00	0.00	0.00	0.00	2.91	1.06	0.00	8.09	0.00	1.93	0.00	0.00	2.69	0.00	0.00	0.00	2.25	0.00
31	ER4a	ExonRegion	0	145.29	88.37	68.76	222.60	173.74	173.51	216.41	114.66	52.65	103.61	99.20	60.98	53.93	57.20	115.09	125.29	102.51	72.28	143.78	133.61	265.65	41.68	49.77	58.44	74.78	34.83	56.08	45.06	50.95
32	E4_Da	KnownBoundary	1	45.71	43.24	30.05	93.39	105.67	90.32	158.31	73.16	23.57	45.82	68.46	33.95	16.37	34.10	41.46	75.43	68.63	32.36	64.74	50.20	135.85	4.23	11.92	18.66	36.33	16.78	20.03	10.15	22.98
33	ER4b	ExonRegion	0	63.29	50.50	28.57	134.50	90.47	78.01	119.46	73.48	44.80	52.46	50.32	49.21	30.50	38.74	88.37	73.05	79.07	34.78	81.92	60.04	124.64	13.11	18.54	62.47	33.41	16.26	18.60	20.51	22.85
34	E4_Db	KnownBoundary	0	0.00	3.68	0.00	0.00	5.89	1.96	2.92	0.00	2.92	1.92	1.39	0.00	1.34	0.00	15.75	3.06	0.00	0.00	0.00	3.64	14.08	0.00	2.31	0.00	0.00	0.00	0.00	0.00	0.00
35	ER4c	ExonRegion	0	1.47	0.32	0.19	0.00	2.89	1.04	1.96	1.26	1.70	1.54	1.59	0.00	0.34	0.43	2.05	0.94	1.03	1.76	0.73	2.30	1.61	0.82	1.10	2.92	0.33	0.72	0.63	0.00	0.23
36	IG47_SR2	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.14	1.11	0.00	0.00	4.09	0.29	0.00	0.00	0.00	0.23
37	IG47_AR3	ActiveIntergenicRegion	0	0.25	1.15	0.00	0.00	0.58	1.61	0.66	0.00	0.79	1.72	0.40	0.98	0.23	1.39	0.00	0.88	1.20	0.40	0.38	1.95	4.64	0.21	0.00	4.46	2.31	0.19	0.87	0.00	0.45