Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC013272.2	Gene	0	12.93	2.51	2.56	5.69	6.99	6.18	10.13	8.86	3.83	5.12	2.39	3.23	3.70	5.53	9.83	7.84	7.74	4.65	1.69	3.96	5.21	7.92	4.40	9.79	5.37	1.91	1.36	13.36	4.70
2	427863	Transcript	0	8.49	2.88	1.69	5.23	5.92	3.58	7.85	7.13	1.55	3.45	2.10	1.55	1.42	3.59	8.28	8.53	3.36	3.72	1.26	0.90	3.62	6.00	4.33	3.67	3.43	0.34	0.90	7.26	1.97
3	440566	Transcript	0	60.35	11.63	49.02	43.63	32.86	10.65	26.15	37.49	13.94	13.27	13.31	17.83	28.38	28.81	44.78	17.49	29.16	8.78	5.39	18.06	9.03	58.99	45.57	28.78	18.74	12.47	16.55	41.04	21.31
4	IG25_AR3	ActiveIntergenicRegion	0	0.00	0.00	1.12	0.00	0.00	1.37	2.02	0.17	0.00	0.00	0.00	0.00	0.00	0.00	11.20	0.00	1.00	1.74	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00
5	ER1a	ExonRegion	0	10.50	0.68	0.00	1.51	3.09	3.58	5.52	3.20	1.42	3.65	1.00	1.04	1.78	3.22	2.13	9.70	7.55	4.56	1.35	1.42	2.10	0.00	0.38	0.91	3.01	0.00	0.00	9.28	0.00
6	E1_Da	NovelBoundary	0	0.00	0.00	4.34	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	1.24	2.37	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78	0.00	0.00	2.20	0.00
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	I1_AR1	ActiveIntronRegion	0	6.96	2.04	1.10	3.97	8.12	3.80	0.74	3.40	1.45	4.18	0.09	0.80	0.00	2.79	0.00	5.20	7.27	3.98	0.59	0.73	3.10	0.00	0.00	1.19	1.79	0.00	0.00	0.90	0.69
9	ER2a	ExonRegion	0	4.28	0.00	0.27	3.37	1.15	1.17	0.95	3.35	0.74	1.54	0.00	1.88	1.52	0.23	1.08	4.43	2.81	0.88	0.00	0.00	1.34	2.12	1.70	1.01	1.01	0.00	0.00	6.90	3.14
10	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2a_E5a	NovelJunction	0	0.00	0.00	1.02	0.00	0.00	3.91	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.90	0.00	0.00	0.00	1.93	0.00	0.00	1.68
12	I2_AR2	ActiveIntronRegion	0	6.36	0.00	1.70	0.00	0.00	1.01	0.35	2.27	2.80	1.07	0.22	2.53	0.00	1.26	0.00	6.00	3.61	2.28	1.89	0.00	2.60	1.07	0.00	2.33	2.54	1.32	0.00	2.45	0.28
13	E3_Aa	NovelBoundary	0	22.30	0.00	1.54	0.00	0.00	3.45	14.36	2.54	4.69	0.00	6.33	1.42	0.00	6.60	15.55	11.47	10.98	9.25	0.00	0.00	8.18	0.00	0.00	5.68	5.76	0.00	0.00	4.00	0.00
14	ER3a	ExonRegion	0	0.33	0.00	1.21	1.69	0.00	1.37	1.55	0.14	0.78	0.11	0.00	1.24	0.30	0.91	0.00	0.00	0.00	1.68	0.00	0.00	2.30	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00
15	ER3b	ExonRegion	0	0.44	2.78	1.56	5.83	0.00	2.24	1.40	0.00	1.49	1.79	1.03	0.80	1.06	1.41	3.99	0.00	0.03	1.34	0.00	0.00	1.98	0.00	0.00	1.64	0.00	0.00	0.00	0.11	0.00
16	E3_Da	NovelBoundary	0	12.03	4.85	0.00	9.92	0.00	3.91	0.00	6.52	7.58	5.11	10.06	0.00	1.24	12.94	17.54	10.94	21.92	4.62	16.18	0.00	2.05	2.09	0.00	16.21	10.08	0.00	0.00	6.07	7.30
17	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	12.16	3.35	3.52	8.97	7.88	7.51	14.67	12.53	4.31	4.07	1.86	3.39	7.20	8.20	16.97	3.03	10.77	6.21	3.00	6.00	8.36	13.00	5.16	17.76	7.53	3.14	0.57	19.34	5.62
19	E4_Da	NovelBoundary	0	5.13	4.17	0.00	0.00	0.00	5.41	2.86	3.78	4.81	5.83	0.00	3.01	1.62	2.26	18.34	7.65	4.70	0.00	0.00	0.00	1.97	0.00	4.73	3.05	1.52	0.00	0.00	6.74	3.66
20	E4a_E5a	KnownJunction	0	7.90	4.56	5.88	10.57	6.93	7.10	5.44	27.72	2.65	1.64	6.07	3.13	5.54	7.44	0.00	7.50	12.65	0.00	0.00	0.00	4.01	8.31	6.85	31.76	3.30	4.12	0.00	6.43	10.14
21	I4_AR1	ActiveIntronRegion	0	1.35	0.00	2.01	0.00	4.19	0.00	0.00	3.00	0.00	0.00	0.50	0.00	0.00	0.00	0.00	4.00	0.37	1.15	0.00	0.00	0.30	0.00	0.00	0.68	0.00	0.66	0.00	0.00	2.54
22	I4_AR2	ActiveIntronRegion	0	1.58	0.95	1.73	0.00	0.72	2.85	1.19	2.72	4.80	2.35	0.00	0.64	0.77	1.74	6.79	3.57	4.85	1.71	2.83	2.62	0.42	1.07	0.00	4.77	2.96	1.86	0.00	2.65	0.99
23	E5_Aa	NovelBoundary	0	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	6.66	5.24	0.00	0.00	0.00	0.00	0.00	0.00	2.63	1.70	0.00	0.00	0.00	3.63
24	ER5a	ExonRegion	0	29.89	4.79	8.34	4.56	20.25	17.83	21.36	25.76	14.33	13.31	8.88	8.53	9.30	15.49	33.86	17.30	21.04	8.11	2.37	9.98	12.55	26.74	9.01	34.42	13.26	6.91	5.86	25.00	16.20
25	E5_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	5.87	2.80	2.54	1.25	5.55	0.00	0.00	0.00	1.99	8.37	0.00	9.05	4.62	8.09	0.00	3.33	0.00	0.00	5.62	0.00	0.00	0.00	3.91	3.04
26	E5a_E6a	KnownJunction	0	55.74	8.43	11.78	51.12	27.71	32.69	54.13	38.12	23.17	40.46	10.88	25.78	15.57	25.44	25.71	22.87	24.83	33.13	24.28	21.67	22.90	31.41	15.96	57.48	46.64	17.51	16.80	55.22	32.45
27	E6_Aa	NovelBoundary	0	2.24	0.00	2.94	0.00	0.00	1.96	0.00	0.00	3.32	1.56	0.00	0.00	0.00	3.28	0.00	0.00	1.37	5.39	0.00	0.00	3.65	0.00	2.41	2.63	1.70	0.00	0.00	2.29	0.00
28	ER6a	ExonRegion	0	54.33	13.27	8.66	37.31	20.23	22.58	49.08	27.80	13.64	25.34	10.08	15.37	10.10	18.10	17.83	23.24	17.42	17.21	7.94	24.89	18.83	27.67	25.68	34.68	24.12	10.17	9.68	49.77	18.46
29	E6_Da	KnownBoundary	0	13.45	7.85	4.21	34.94	0.00	5.29	23.97	19.01	7.46	14.54	9.30	7.50	4.30	10.06	17.74	13.92	3.92	10.02	0.00	3.89	15.36	25.09	14.09	8.19	9.05	2.19	2.48	14.69	8.19
30	E6a_E6b	KnownJunction	0	178.96	34.90	144.16	129.20	96.68	30.58	76.90	112.32	41.05	39.71	39.92	52.26	84.83	84.88	134.34	52.48	87.47	24.66	16.18	51.52	24.79	176.97	136.18	85.36	56.22	37.42	49.65	120.55	62.99
31	E6_Ab	KnownBoundary	0	19.52	9.02	3.09	0.00	41.56	12.01	27.58	21.55	2.59	7.23	1.49	2.32	1.94	8.97	24.32	10.33	6.42	13.87	0.00	0.00	11.75	15.22	14.68	13.70	7.50	0.00	0.00	14.60	1.62
32	ER6b	ExonRegion	0	27.67	13.74	8.16	21.27	25.36	13.12	32.80	29.12	5.62	12.08	9.52	4.84	3.78	14.51	38.19	28.53	6.47	13.15	4.94	3.07	14.65	27.86	19.56	16.43	13.12	1.71	4.50	20.15	6.71
33	ER6c	ExonRegion	0	16.25	5.79	5.05	0.00	21.63	7.09	16.76	13.42	2.45	3.15	3.45	2.34	0.41	7.57	19.45	10.92	1.32	5.46	2.98	0.37	6.76	12.43	11.18	9.45	6.02	1.61	1.35	11.15	3.43
34	E6_Db	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	2.92	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.19	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00
35	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E7_Aa	NovelBoundary	0	2.60	0.00	0.00	0.00	5.60	0.00	0.00	0.00	2.95	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	2.29	0.00
37	ER7a	ExonRegion	0	4.29	0.00	2.65	0.00	4.98	0.00	0.00	0.00	0.00	0.00	0.00	0.90	0.00	1.07	0.00	0.46	0.00	0.00	0.00	0.26	0.13	0.33	2.96	0.00	0.00	0.00	0.00	3.70	1.34
38	ER7b	ExonRegion	0	1.77	0.00	1.70	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.65	0.00	0.00	0.00	0.00	0.00	2.65	0.00	0.00	0.52	0.00	0.00	0.00	0.00	2.57	0.93